RNA–Protein interactions for RNA: ENST00000548836.1

USP15-210, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 3

Gene USP15, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-210ENST00000548836 AEBP2Q6ZN18 517 aaPredicted RBP28.39■■■□□ 2.14
USP15-210ENST00000548836 CHIC1Q5VXU3 224 aa27.66■■■□□ 2.02
USP15-210ENST00000548836 PHF23Q9BUL5 403 aaPredicted RBP24.45■■□□□ 1.5
USP15-210ENST00000548836 SENP3Q9H4L4 574 aaPredicted RBP23.89■■□□□ 1.41
USP15-210ENST00000548836 PLPPR3Q6T4P5 718 aa22.4■■□□□ 1.18
USP15-210ENST00000548836 FOXD1Q16676 465 aa22.28■■□□□ 1.16
USP15-210ENST00000548836 PPP6R1Q9UPN7 881 aa21.55■■□□□ 1.04
USP15-210ENST00000548836 ADRA2BP18089 450 aa21.47■■□□□ 1.03
USP15-210ENST00000548836 PIAS4Q8N2W9 510 aaPredicted RBP20.92■□□□□ 0.94
USP15-210ENST00000548836 MSH5O43196 834 aa20.39■□□□□ 0.85
USP15-210ENST00000548836 PPP4R3CPQ6ZMV5 832 aa19.79■□□□□ 0.76
USP15-210ENST00000548836 MAPK8IP2Q13387 824 aaPredicted RBP19.5■□□□□ 0.71
USP15-210ENST00000548836 KCNA4P22459 653 aa19.44■□□□□ 0.7
USP15-210ENST00000548836 SCAF1Q9H7N4 1312 aaKnown RBP19.44■□□□□ 0.7
USP15-210ENST00000548836 CNKSR2Q8WXI2 1034 aa19.19■□□□□ 0.66
USP15-210ENST00000548836 NCBP3Q53F19 620 aaKnown RBP19.15■□□□□ 0.66
USP15-210ENST00000548836 DMRT2Q9Y5R5 561 aa19.14■□□□□ 0.65
USP15-210ENST00000548836 NPM3O75607 178 aaKnown RBP19.05■□□□□ 0.64
USP15-210ENST00000548836 RNF216Q9NWF9 866 aaPredicted RBP18.82■□□□□ 0.6
USP15-210ENST00000548836 HOXD11P31277 338 aaPredicted RBP18.79■□□□□ 0.6
USP15-210ENST00000548836 POTEDQ86YR6 584 aa18.6■□□□□ 0.57
USP15-210ENST00000548836 DNAJC5BQ9UF47 199 aa18.52■□□□□ 0.56
USP15-210ENST00000548836 SLC4A1APQ9BWU0 796 aaKnown RBP18.42■□□□□ 0.54
USP15-210ENST00000548836 DCAF8L1A6NGE4 600 aa18.17■□□□□ 0.5
USP15-210ENST00000548836 SLC4A2P04920 1241 aa18.04■□□□□ 0.48
USP15-210ENST00000548836 ZBTB22O15209 634 aa17.98■□□□□ 0.47
USP15-210ENST00000548836 EHMT2Q96KQ7 1210 aa17.96■□□□□ 0.47
USP15-210ENST00000548836 CSRNP3Q8WYN3 585 aa17.85■□□□□ 0.45
USP15-210ENST00000548836 FOXD4L1Q9NU39 408 aa17.8■□□□□ 0.44
USP15-210ENST00000548836 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.77■□□□□ 0.44
USP15-210ENST00000548836 U3KPZ7 1027 aaPredicted RBP17.63■□□□□ 0.41
USP15-210ENST00000548836 RNF39Q9H2S5 420 aa17.59■□□□□ 0.41
USP15-210ENST00000548836 MYCNP04198 464 aaPredicted RBP17.51■□□□□ 0.39
USP15-210ENST00000548836 C1QBPQ07021 282 aaKnown RBP17.29■□□□□ 0.36
USP15-210ENST00000548836 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.22■□□□□ 0.35
USP15-210ENST00000548836 HNRNPUL2Q1KMD3 747 aaKnown RBP17.22■□□□□ 0.35
USP15-210ENST00000548836 SAMD1Q6SPF0 538 aaPredicted RBP17.21■□□□□ 0.35
USP15-210ENST00000548836 ATF5Q9Y2D1 282 aaPredicted RBP17.2■□□□□ 0.34
USP15-210ENST00000548836 ATXN8OSP0DMR3 200 aa17.16■□□□□ 0.34
USP15-210ENST00000548836 SPINK5Q9NQ38 1064 aaPredicted RBP17.13■□□□□ 0.33
USP15-210ENST00000548836 CACNB1Q02641 598 aaPredicted RBP16.98■□□□□ 0.31
USP15-210ENST00000548836 APLP2Q06481 763 aa16.98■□□□□ 0.31
USP15-210ENST00000548836 CAPN15O75808 1086 aa16.92■□□□□ 0.3
USP15-210ENST00000548836 TRHP20396 242 aaPredicted RBP16.88■□□□□ 0.29
USP15-210ENST00000548836 ZNF219Q9P2Y4 722 aaPredicted RBP16.84■□□□□ 0.29
USP15-210ENST00000548836 DSG3P32926 999 aa16.75■□□□□ 0.27
USP15-210ENST00000548836 ABCB7O75027 752 aa16.68■□□□□ 0.26
USP15-210ENST00000548836 POLA2Q14181 598 aa16.66■□□□□ 0.26
USP15-210ENST00000548836 MKRN4PQ13434 485 aaPredicted RBP16.45■□□□□ 0.22
USP15-210ENST00000548836 ZBTB12Q9Y330 459 aaPredicted RBP16.26■□□□□ 0.19
USP15-210ENST00000548836 FBLN2P98095 1184 aa16.22■□□□□ 0.19
USP15-210ENST00000548836 OSCARQ8IYS5 282 aa16.1■□□□□ 0.17
USP15-210ENST00000548836 FKBP8Q14318 412 aa16.03■□□□□ 0.16
USP15-210ENST00000548836 SPDYE4A6NLX3 237 aa15.96■□□□□ 0.15
USP15-210ENST00000548836 SPDYE2BA6NHP3 402 aa15.91■□□□□ 0.14
USP15-210ENST00000548836 SPDYE6P0CI01 402 aa15.91■□□□□ 0.14
USP15-210ENST00000548836 SPDYE2Q495Y8 402 aa15.91■□□□□ 0.14
USP15-210ENST00000548836 SSUH2Q9Y2M2 353 aa15.88■□□□□ 0.13
USP15-210ENST00000548836 ZNF692Q9BU19 519 aaPredicted RBP15.84■□□□□ 0.13
USP15-210ENST00000548836 PROM2Q8N271 834 aa15.83■□□□□ 0.12
USP15-210ENST00000548836 RBM42Q9BTD8 480 aaKnown RBP15.8■□□□□ 0.12
USP15-210ENST00000548836 AKT1S1Q96B36 256 aa15.69■□□□□ 0.1
USP15-210ENST00000548836 PABPN1Q86U42 306 aaKnown RBP eCLIP15.67■□□□□ 0.1
USP15-210ENST00000548836 REM2Q8IYK8 340 aaPredicted RBP15.59■□□□□ 0.09
USP15-210ENST00000548836 PITPNM1O00562 1244 aa15.42■□□□□ 0.06
USP15-210ENST00000548836 SPDYE1Q8NFV5 336 aaPredicted RBP15.4■□□□□ 0.06
USP15-210ENST00000548836 FBXO3Q9UK99 471 aa15.35■□□□□ 0.05
USP15-210ENST00000548836 STAG3Q9UJ98 1225 aa15.32■□□□□ 0.04
USP15-210ENST00000548836 CLEC11AQ9Y240 323 aa15.32■□□□□ 0.04
USP15-210ENST00000548836 VASPP50552 380 aaPredicted RBP15.24■□□□□ 0.03
USP15-210ENST00000548836 CHRDL2Q6WN34 429 aa15.21■□□□□ 0.03
USP15-210ENST00000548836 PRR29P0C7W0 189 aa15.19■□□□□ 0.02
USP15-210ENST00000548836 FXR2P51116 673 aaKnown RBP eCLIP15.14■□□□□ 0.01
USP15-210ENST00000548836 CREBZFQ9NS37 354 aa15.14■□□□□ 0.01
USP15-210ENST00000548836 IFNLR1Q8IU57 520 aaPredicted RBP15.12■□□□□ 0.01
USP15-210ENST00000548836 MIER1Q8N108 512 aa15.08■□□□□ 0
USP15-210ENST00000548836 PIP4P2Q8N4L2 257 aa15.07■□□□□ 0
USP15-210ENST00000548836 MNX1P50219 401 aaPredicted RBP15.05■□□□□ -0
USP15-210ENST00000548836 CHADLQ6NUI6 762 aa15.05■□□□□ -0
USP15-210ENST00000548836 PLCD3Q8N3E9 789 aa15.03■□□□□ -0
USP15-210ENST00000548836 PRKAR2AP13861 404 aaKnown RBP14.98□□□□□ -0.01
USP15-210ENST00000548836 FARP1Q9Y4F1 1045 aaPredicted RBP14.88□□□□□ -0.03
USP15-210ENST00000548836 KLHL34Q8N239 644 aa14.86□□□□□ -0.03
USP15-210ENST00000548836 PLEKHG5O94827 1062 aa14.85□□□□□ -0.03
USP15-210ENST00000548836 NUBP1P53384 320 aa14.82□□□□□ -0.04
USP15-210ENST00000548836 SPOCK2Q92563 424 aa14.81□□□□□ -0.04
USP15-210ENST00000548836 ZBTB47Q9UFB7 747 aaPredicted RBP14.81□□□□□ -0.04
USP15-210ENST00000548836 RASEFQ8IZ41 740 aa14.74□□□□□ -0.05
USP15-210ENST00000548836 NPM1P06748 294 aaKnown RBP eCLIP14.72□□□□□ -0.05
USP15-210ENST00000548836 RTN4Q9NQC3 1192 aaKnown RBP14.72□□□□□ -0.05
USP15-210ENST00000548836 POTEHQ6S545 545 aa14.69□□□□□ -0.06
USP15-210ENST00000548836 PKD2Q13563 968 aa14.64□□□□□ -0.07
USP15-210ENST00000548836 AMER1Q5JTC6 1135 aaPredicted RBP14.63□□□□□ -0.07
USP15-210ENST00000548836 C19orf67A6NJJ6 358 aa14.62□□□□□ -0.07
USP15-210ENST00000548836 EVX2Q03828 476 aa14.57□□□□□ -0.08
USP15-210ENST00000548836 DCAF8Q5TAQ9 597 aa14.55□□□□□ -0.08
USP15-210ENST00000548836 TSPYL2Q9H2G4 693 aaPredicted RBP14.55□□□□□ -0.08
USP15-210ENST00000548836 CD44P16070 742 aaKnown RBP14.54□□□□□ -0.08
USP15-210ENST00000548836 FAM212AQ96EL1 285 aa14.54□□□□□ -0.08
USP15-210ENST00000548836 CIZ1Q9ULV3 898 aaPredicted RBP14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms