RNA–Protein interactions for RNA: ENST00000548702.1

AC078820.1-201, humanhuman

TSL 3 BASIC

Gene AC078820.1, Length 742 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC078820.1-201ENST00000548702 AEBP2Q6ZN18 517 aaPredicted RBP26.28■■□□□ 1.8
AC078820.1-201ENST00000548702 CHIC1Q5VXU3 224 aa25.6■■□□□ 1.69
AC078820.1-201ENST00000548702 PHF23Q9BUL5 403 aaPredicted RBP22.43■■□□□ 1.18
AC078820.1-201ENST00000548702 SENP3Q9H4L4 574 aaPredicted RBP22.43■■□□□ 1.18
AC078820.1-201ENST00000548702 PLPPR3Q6T4P5 718 aa20.78■□□□□ 0.92
AC078820.1-201ENST00000548702 FOXD1Q16676 465 aa20.77■□□□□ 0.92
AC078820.1-201ENST00000548702 ADRA2BP18089 450 aa19.85■□□□□ 0.77
AC078820.1-201ENST00000548702 PPP6R1Q9UPN7 881 aa19.84■□□□□ 0.77
AC078820.1-201ENST00000548702 PIAS4Q8N2W9 510 aaPredicted RBP19.61■□□□□ 0.73
AC078820.1-201ENST00000548702 POTEDQ86YR6 584 aa19.5■□□□□ 0.71
AC078820.1-201ENST00000548702 MSH5O43196 834 aa19.29■□□□□ 0.68
AC078820.1-201ENST00000548702 SCAF1Q9H7N4 1312 aaKnown RBP18.28■□□□□ 0.52
AC078820.1-201ENST00000548702 PPP4R3CPQ6ZMV5 832 aa18.26■□□□□ 0.51
AC078820.1-201ENST00000548702 MAPK8IP2Q13387 824 aaPredicted RBP18.03■□□□□ 0.48
AC078820.1-201ENST00000548702 DMRT2Q9Y5R5 561 aa17.85■□□□□ 0.45
AC078820.1-201ENST00000548702 NCBP3Q53F19 620 aaKnown RBP17.82■□□□□ 0.44
AC078820.1-201ENST00000548702 CNKSR2Q8WXI2 1034 aa17.81■□□□□ 0.44
AC078820.1-201ENST00000548702 KCNA4P22459 653 aa17.64■□□□□ 0.41
AC078820.1-201ENST00000548702 RNF216Q9NWF9 866 aaPredicted RBP17.48■□□□□ 0.39
AC078820.1-201ENST00000548702 NPM3O75607 178 aaKnown RBP17.46■□□□□ 0.39
AC078820.1-201ENST00000548702 HOXD11P31277 338 aaPredicted RBP17.42■□□□□ 0.38
AC078820.1-201ENST00000548702 DCAF8L1A6NGE4 600 aa17.16■□□□□ 0.34
AC078820.1-201ENST00000548702 DNAJC5BQ9UF47 199 aa16.96■□□□□ 0.31
AC078820.1-201ENST00000548702 SLC4A1APQ9BWU0 796 aaKnown RBP16.83■□□□□ 0.28
AC078820.1-201ENST00000548702 CACNB1Q02641 598 aaPredicted RBP16.75■□□□□ 0.27
AC078820.1-201ENST00000548702 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.67■□□□□ 0.26
AC078820.1-201ENST00000548702 SLC4A2P04920 1241 aa16.48■□□□□ 0.23
AC078820.1-201ENST00000548702 RNF39Q9H2S5 420 aa16.45■□□□□ 0.22
AC078820.1-201ENST00000548702 FOXD4L1Q9NU39 408 aa16.33■□□□□ 0.2
AC078820.1-201ENST00000548702 U3KPZ7 1027 aaPredicted RBP16.31■□□□□ 0.2
AC078820.1-201ENST00000548702 C1QBPQ07021 282 aaKnown RBP16.3■□□□□ 0.2
AC078820.1-201ENST00000548702 MYCNP04198 464 aaPredicted RBP16.19■□□□□ 0.18
AC078820.1-201ENST00000548702 EHMT2Q96KQ7 1210 aa16.18■□□□□ 0.18
AC078820.1-201ENST00000548702 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.17■□□□□ 0.18
AC078820.1-201ENST00000548702 ZBTB22O15209 634 aa16.17■□□□□ 0.18
AC078820.1-201ENST00000548702 HNRNPUL2Q1KMD3 747 aaKnown RBP16.17■□□□□ 0.18
AC078820.1-201ENST00000548702 SAMD1Q6SPF0 538 aaPredicted RBP16.08■□□□□ 0.16
AC078820.1-201ENST00000548702 APLP2Q06481 763 aa16.07■□□□□ 0.16
AC078820.1-201ENST00000548702 CSRNP3Q8WYN3 585 aa16.02■□□□□ 0.16
AC078820.1-201ENST00000548702 CAPN15O75808 1086 aa15.91■□□□□ 0.14
AC078820.1-201ENST00000548702 SPINK5Q9NQ38 1064 aaPredicted RBP15.89■□□□□ 0.13
AC078820.1-201ENST00000548702 ZNF219Q9P2Y4 722 aaPredicted RBP15.81■□□□□ 0.12
AC078820.1-201ENST00000548702 ATXN8OSP0DMR3 200 aa15.79■□□□□ 0.12
AC078820.1-201ENST00000548702 TRHP20396 242 aaPredicted RBP15.79■□□□□ 0.12
AC078820.1-201ENST00000548702 ATF5Q9Y2D1 282 aaPredicted RBP15.67■□□□□ 0.1
AC078820.1-201ENST00000548702 DSG3P32926 999 aa15.62■□□□□ 0.09
AC078820.1-201ENST00000548702 ABCB7O75027 752 aa15.55■□□□□ 0.08
AC078820.1-201ENST00000548702 POLA2Q14181 598 aa15.48■□□□□ 0.07
AC078820.1-201ENST00000548702 ZBTB12Q9Y330 459 aaPredicted RBP15.29■□□□□ 0.04
AC078820.1-201ENST00000548702 POTEHQ6S545 545 aa15.2■□□□□ 0.02
AC078820.1-201ENST00000548702 FBLN2P98095 1184 aa15.17■□□□□ 0.02
AC078820.1-201ENST00000548702 MKRN4PQ13434 485 aaPredicted RBP14.98□□□□□ -0.01
AC078820.1-201ENST00000548702 RBM42Q9BTD8 480 aaKnown RBP14.98□□□□□ -0.01
AC078820.1-201ENST00000548702 OSCARQ8IYS5 282 aa14.94□□□□□ -0.02
AC078820.1-201ENST00000548702 SPDYE2BA6NHP3 402 aa14.82□□□□□ -0.04
AC078820.1-201ENST00000548702 SPDYE6P0CI01 402 aa14.82□□□□□ -0.04
AC078820.1-201ENST00000548702 SPDYE2Q495Y8 402 aa14.82□□□□□ -0.04
AC078820.1-201ENST00000548702 ZNF692Q9BU19 519 aaPredicted RBP14.75□□□□□ -0.05
AC078820.1-201ENST00000548702 AKT1S1Q96B36 256 aa14.72□□□□□ -0.05
AC078820.1-201ENST00000548702 SPDYE4A6NLX3 237 aa14.67□□□□□ -0.06
AC078820.1-201ENST00000548702 SSUH2Q9Y2M2 353 aa14.64□□□□□ -0.07
AC078820.1-201ENST00000548702 FKBP8Q14318 412 aa14.55□□□□□ -0.08
AC078820.1-201ENST00000548702 REM2Q8IYK8 340 aaPredicted RBP14.55□□□□□ -0.08
AC078820.1-201ENST00000548702 PABPN1Q86U42 306 aaKnown RBP eCLIP14.53□□□□□ -0.08
AC078820.1-201ENST00000548702 SPDYE1Q8NFV5 336 aaPredicted RBP14.43□□□□□ -0.1
AC078820.1-201ENST00000548702 CLEC11AQ9Y240 323 aa14.38□□□□□ -0.11
AC078820.1-201ENST00000548702 PITPNM1O00562 1244 aa14.37□□□□□ -0.11
AC078820.1-201ENST00000548702 CHRDL2Q6WN34 429 aa14.35□□□□□ -0.11
AC078820.1-201ENST00000548702 PROM2Q8N271 834 aa14.33□□□□□ -0.12
AC078820.1-201ENST00000548702 STAG3Q9UJ98 1225 aa14.32□□□□□ -0.12
AC078820.1-201ENST00000548702 PRR29P0C7W0 189 aa14.24□□□□□ -0.13
AC078820.1-201ENST00000548702 FXR2P51116 673 aaKnown RBP eCLIP14.13□□□□□ -0.15
AC078820.1-201ENST00000548702 FBXO3Q9UK99 471 aa14.13□□□□□ -0.15
AC078820.1-201ENST00000548702 PIP4P2Q8N4L2 257 aa14.12□□□□□ -0.15
AC078820.1-201ENST00000548702 PRKAR2AP13861 404 aaKnown RBP14.04□□□□□ -0.16
AC078820.1-201ENST00000548702 SP7Q8TDD2 431 aaPredicted RBP14.04□□□□□ -0.16
AC078820.1-201ENST00000548702 PLEKHG5O94827 1062 aa13.98□□□□□ -0.17
AC078820.1-201ENST00000548702 CHADLQ6NUI6 762 aa13.98□□□□□ -0.17
AC078820.1-201ENST00000548702 MIER1Q8N108 512 aa13.95□□□□□ -0.18
AC078820.1-201ENST00000548702 CREBZFQ9NS37 354 aa13.94□□□□□ -0.18
AC078820.1-201ENST00000548702 PLCD3Q8N3E9 789 aa13.93□□□□□ -0.18
AC078820.1-201ENST00000548702 VASPP50552 380 aaPredicted RBP13.87□□□□□ -0.19
AC078820.1-201ENST00000548702 FARP1Q9Y4F1 1045 aaPredicted RBP13.86□□□□□ -0.19
AC078820.1-201ENST00000548702 ZBTB47Q9UFB7 747 aaPredicted RBP13.82□□□□□ -0.2
AC078820.1-201ENST00000548702 NPM1P06748 294 aaKnown RBP eCLIP13.81□□□□□ -0.2
AC078820.1-201ENST00000548702 HAX1O00165 279 aa13.76□□□□□ -0.21
AC078820.1-201ENST00000548702 MNX1P50219 401 aaPredicted RBP13.74□□□□□ -0.21
AC078820.1-201ENST00000548702 KLHL34Q8N239 644 aa13.74□□□□□ -0.21
AC078820.1-201ENST00000548702 C19orf67A6NJJ6 358 aa13.65□□□□□ -0.22
AC078820.1-201ENST00000548702 PAK3O75914 559 aaPredicted RBP13.64□□□□□ -0.23
AC078820.1-201ENST00000548702 CD44P16070 742 aaKnown RBP13.64□□□□□ -0.23
AC078820.1-201ENST00000548702 IFNLR1Q8IU57 520 aaPredicted RBP13.64□□□□□ -0.23
AC078820.1-201ENST00000548702 SPOCK2Q92563 424 aa13.57□□□□□ -0.24
AC078820.1-201ENST00000548702 ZRANB1Q9UGI0 708 aa13.55□□□□□ -0.24
AC078820.1-201ENST00000548702 NUBP1P53384 320 aa13.54□□□□□ -0.24
AC078820.1-201ENST00000548702 TSPYL2Q9H2G4 693 aaPredicted RBP13.53□□□□□ -0.24
AC078820.1-201ENST00000548702 RASEFQ8IZ41 740 aa13.52□□□□□ -0.25
AC078820.1-201ENST00000548702 FAM212AQ96EL1 285 aa13.52□□□□□ -0.25
AC078820.1-201ENST00000548702 EVX2Q03828 476 aa13.51□□□□□ -0.25
AC078820.1-201ENST00000548702 DCAF8Q5TAQ9 597 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 480.8 ms