RNA–Protein interactions for RNA: ENST00000548512.1

LINC02424-201, Transcript of long intergenic non-protein coding RNA 2424, humanhuman

TSL 1 (best) BASIC

Gene LINC02424, Length 1,264 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02424-201ENST00000548512 AEBP2Q6ZN18 517 aaPredicted RBP35.25■■■■□ 3.23
LINC02424-201ENST00000548512 CHIC1Q5VXU3 224 aa34.46■■■■□ 3.11
LINC02424-201ENST00000548512 PHF23Q9BUL5 403 aaPredicted RBP30.39■■■□□ 2.46
LINC02424-201ENST00000548512 SENP3Q9H4L4 574 aaPredicted RBP29.76■■■□□ 2.35
LINC02424-201ENST00000548512 PLPPR3Q6T4P5 718 aa27.95■■■□□ 2.06
LINC02424-201ENST00000548512 FOXD1Q16676 465 aa27.69■■■□□ 2.02
LINC02424-201ENST00000548512 PPP6R1Q9UPN7 881 aa26.76■■□□□ 1.87
LINC02424-201ENST00000548512 ADRA2BP18089 450 aa26.69■■□□□ 1.86
LINC02424-201ENST00000548512 PIAS4Q8N2W9 510 aaPredicted RBP26.05■■□□□ 1.76
LINC02424-201ENST00000548512 MSH5O43196 834 aa25.39■■□□□ 1.66
LINC02424-201ENST00000548512 PPP4R3CPQ6ZMV5 832 aa24.68■■□□□ 1.54
LINC02424-201ENST00000548512 SCAF1Q9H7N4 1312 aaKnown RBP24.29■■□□□ 1.48
LINC02424-201ENST00000548512 KCNA4P22459 653 aa24.26■■□□□ 1.47
LINC02424-201ENST00000548512 MAPK8IP2Q13387 824 aaPredicted RBP24.21■■□□□ 1.47
LINC02424-201ENST00000548512 POTEDQ86YR6 584 aa24.05■■□□□ 1.44
LINC02424-201ENST00000548512 NCBP3Q53F19 620 aaKnown RBP23.97■■□□□ 1.43
LINC02424-201ENST00000548512 CNKSR2Q8WXI2 1034 aa23.95■■□□□ 1.42
LINC02424-201ENST00000548512 DMRT2Q9Y5R5 561 aa23.83■■□□□ 1.41
LINC02424-201ENST00000548512 NPM3O75607 178 aaKnown RBP23.74■■□□□ 1.39
LINC02424-201ENST00000548512 RNF216Q9NWF9 866 aaPredicted RBP23.47■■□□□ 1.35
LINC02424-201ENST00000548512 HOXD11P31277 338 aaPredicted RBP23.4■■□□□ 1.34
LINC02424-201ENST00000548512 DNAJC5BQ9UF47 199 aa23.11■■□□□ 1.29
LINC02424-201ENST00000548512 SLC4A1APQ9BWU0 796 aaKnown RBP23.05■■□□□ 1.28
LINC02424-201ENST00000548512 DCAF8L1A6NGE4 600 aa22.64■■□□□ 1.21
LINC02424-201ENST00000548512 EHMT2Q96KQ7 1210 aa22.5■■□□□ 1.19
LINC02424-201ENST00000548512 SLC4A2P04920 1241 aa22.44■■□□□ 1.18
LINC02424-201ENST00000548512 ZBTB22O15209 634 aa22.4■■□□□ 1.18
LINC02424-201ENST00000548512 CSRNP3Q8WYN3 585 aa22.3■■□□□ 1.16
LINC02424-201ENST00000548512 FOXD4L1Q9NU39 408 aa22.25■■□□□ 1.15
LINC02424-201ENST00000548512 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.17■■□□□ 1.14
LINC02424-201ENST00000548512 U3KPZ7 1027 aaPredicted RBP21.95■■□□□ 1.1
LINC02424-201ENST00000548512 MYCNP04198 464 aaPredicted RBP21.88■■□□□ 1.09
LINC02424-201ENST00000548512 RNF39Q9H2S5 420 aa21.85■■□□□ 1.09
LINC02424-201ENST00000548512 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.55■■□□□ 1.04
LINC02424-201ENST00000548512 HNRNPUL2Q1KMD3 747 aaKnown RBP21.55■■□□□ 1.04
LINC02424-201ENST00000548512 C1QBPQ07021 282 aaKnown RBP21.53■■□□□ 1.04
LINC02424-201ENST00000548512 SAMD1Q6SPF0 538 aaPredicted RBP21.52■■□□□ 1.04
LINC02424-201ENST00000548512 ATXN8OSP0DMR3 200 aa21.47■■□□□ 1.03
LINC02424-201ENST00000548512 ATF5Q9Y2D1 282 aaPredicted RBP21.39■■□□□ 1.01
LINC02424-201ENST00000548512 SPINK5Q9NQ38 1064 aaPredicted RBP21.29■■□□□ 1
LINC02424-201ENST00000548512 APLP2Q06481 763 aa21.28■■□□□ 1
LINC02424-201ENST00000548512 CACNB1Q02641 598 aaPredicted RBP21.1■□□□□ 0.97
LINC02424-201ENST00000548512 CAPN15O75808 1086 aa21.09■□□□□ 0.97
LINC02424-201ENST00000548512 TRHP20396 242 aaPredicted RBP21.03■□□□□ 0.96
LINC02424-201ENST00000548512 ZNF219Q9P2Y4 722 aaPredicted RBP21.03■□□□□ 0.96
LINC02424-201ENST00000548512 DSG3P32926 999 aa20.82■□□□□ 0.92
LINC02424-201ENST00000548512 ABCB7O75027 752 aa20.76■□□□□ 0.91
LINC02424-201ENST00000548512 POLA2Q14181 598 aa20.75■□□□□ 0.91
LINC02424-201ENST00000548512 MKRN4PQ13434 485 aaPredicted RBP20.47■□□□□ 0.87
LINC02424-201ENST00000548512 ZBTB12Q9Y330 459 aaPredicted RBP20.36■□□□□ 0.85
LINC02424-201ENST00000548512 FBLN2P98095 1184 aa20.3■□□□□ 0.84
LINC02424-201ENST00000548512 FKBP8Q14318 412 aa20.07■□□□□ 0.8
LINC02424-201ENST00000548512 OSCARQ8IYS5 282 aa20.06■□□□□ 0.8
LINC02424-201ENST00000548512 SPDYE4A6NLX3 237 aa19.95■□□□□ 0.78
LINC02424-201ENST00000548512 SPDYE2BA6NHP3 402 aa19.87■□□□□ 0.77
LINC02424-201ENST00000548512 SPDYE6P0CI01 402 aa19.87■□□□□ 0.77
LINC02424-201ENST00000548512 SPDYE2Q495Y8 402 aa19.87■□□□□ 0.77
LINC02424-201ENST00000548512 SSUH2Q9Y2M2 353 aa19.8■□□□□ 0.76
LINC02424-201ENST00000548512 ZNF692Q9BU19 519 aaPredicted RBP19.78■□□□□ 0.76
LINC02424-201ENST00000548512 PROM2Q8N271 834 aa19.76■□□□□ 0.75
LINC02424-201ENST00000548512 RBM42Q9BTD8 480 aaKnown RBP19.73■□□□□ 0.75
LINC02424-201ENST00000548512 AKT1S1Q96B36 256 aa19.56■□□□□ 0.72
LINC02424-201ENST00000548512 PABPN1Q86U42 306 aaKnown RBP eCLIP19.55■□□□□ 0.72
LINC02424-201ENST00000548512 REM2Q8IYK8 340 aaPredicted RBP19.4■□□□□ 0.7
LINC02424-201ENST00000548512 FBXO3Q9UK99 471 aa19.27■□□□□ 0.68
LINC02424-201ENST00000548512 SPDYE1Q8NFV5 336 aaPredicted RBP19.22■□□□□ 0.67
LINC02424-201ENST00000548512 PITPNM1O00562 1244 aa19.19■□□□□ 0.66
LINC02424-201ENST00000548512 STAG3Q9UJ98 1225 aa19.19■□□□□ 0.66
LINC02424-201ENST00000548512 CLEC11AQ9Y240 323 aa19.11■□□□□ 0.65
LINC02424-201ENST00000548512 VASPP50552 380 aaPredicted RBP19.08■□□□□ 0.64
LINC02424-201ENST00000548512 PRR29P0C7W0 189 aa18.96■□□□□ 0.63
LINC02424-201ENST00000548512 CHRDL2Q6WN34 429 aa18.92■□□□□ 0.62
LINC02424-201ENST00000548512 IFNLR1Q8IU57 520 aaPredicted RBP18.87■□□□□ 0.61
LINC02424-201ENST00000548512 CREBZFQ9NS37 354 aa18.86■□□□□ 0.61
LINC02424-201ENST00000548512 MIER1Q8N108 512 aa18.85■□□□□ 0.61
LINC02424-201ENST00000548512 FXR2P51116 673 aaKnown RBP eCLIP18.83■□□□□ 0.6
LINC02424-201ENST00000548512 PLCD3Q8N3E9 789 aa18.82■□□□□ 0.6
LINC02424-201ENST00000548512 PIP4P2Q8N4L2 257 aa18.75■□□□□ 0.59
LINC02424-201ENST00000548512 MNX1P50219 401 aaPredicted RBP18.72■□□□□ 0.59
LINC02424-201ENST00000548512 CHADLQ6NUI6 762 aa18.72■□□□□ 0.59
LINC02424-201ENST00000548512 PRKAR2AP13861 404 aaKnown RBP18.67■□□□□ 0.58
LINC02424-201ENST00000548512 PLEKHG5O94827 1062 aa18.65■□□□□ 0.58
LINC02424-201ENST00000548512 POTEHQ6S545 545 aa18.62■□□□□ 0.57
LINC02424-201ENST00000548512 KLHL34Q8N239 644 aa18.62■□□□□ 0.57
LINC02424-201ENST00000548512 ZBTB47Q9UFB7 747 aaPredicted RBP18.59■□□□□ 0.57
LINC02424-201ENST00000548512 SPOCK2Q92563 424 aa18.56■□□□□ 0.56
LINC02424-201ENST00000548512 FARP1Q9Y4F1 1045 aaPredicted RBP18.54■□□□□ 0.56
LINC02424-201ENST00000548512 NUBP1P53384 320 aa18.49■□□□□ 0.55
LINC02424-201ENST00000548512 RTN4Q9NQC3 1192 aaKnown RBP18.47■□□□□ 0.55
LINC02424-201ENST00000548512 AMER1Q5JTC6 1135 aaPredicted RBP18.44■□□□□ 0.54
LINC02424-201ENST00000548512 NPM1P06748 294 aaKnown RBP eCLIP18.42■□□□□ 0.54
LINC02424-201ENST00000548512 RASEFQ8IZ41 740 aa18.37■□□□□ 0.53
LINC02424-201ENST00000548512 PKD2Q13563 968 aa18.29■□□□□ 0.52
LINC02424-201ENST00000548512 FAM212AQ96EL1 285 aa18.21■□□□□ 0.51
LINC02424-201ENST00000548512 CIZ1Q9ULV3 898 aaPredicted RBP18.2■□□□□ 0.5
LINC02424-201ENST00000548512 GSE1Q14687 1217 aa18.19■□□□□ 0.5
LINC02424-201ENST00000548512 DCAF8Q5TAQ9 597 aa18.19■□□□□ 0.5
LINC02424-201ENST00000548512 C19orf67A6NJJ6 358 aa18.18■□□□□ 0.5
LINC02424-201ENST00000548512 TSPYL2Q9H2G4 693 aaPredicted RBP18.16■□□□□ 0.5
LINC02424-201ENST00000548512 CD44P16070 742 aaKnown RBP18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 149.8 ms