RNA–Protein interactions for RNA: ENST00000548029.1

AC090503.1-201, humanhuman

TSL 3 BASIC

Gene AC090503.1, Length 729 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC090503.1-201ENST00000548029 AEBP2Q6ZN18 517 aaPredicted RBP28.2■■■□□ 2.1
AC090503.1-201ENST00000548029 CHIC1Q5VXU3 224 aa26.74■■□□□ 1.87
AC090503.1-201ENST00000548029 SENP3Q9H4L4 574 aaPredicted RBP24.04■■□□□ 1.44
AC090503.1-201ENST00000548029 PHF23Q9BUL5 403 aaPredicted RBP23.72■■□□□ 1.39
AC090503.1-201ENST00000548029 FOXD1Q16676 465 aa22.42■■□□□ 1.18
AC090503.1-201ENST00000548029 PLPPR3Q6T4P5 718 aa21.36■■□□□ 1.01
AC090503.1-201ENST00000548029 PIAS4Q8N2W9 510 aaPredicted RBP20.99■□□□□ 0.95
AC090503.1-201ENST00000548029 MSH5O43196 834 aa20.97■□□□□ 0.95
AC090503.1-201ENST00000548029 PPP6R1Q9UPN7 881 aa20.94■□□□□ 0.94
AC090503.1-201ENST00000548029 ADRA2BP18089 450 aa20.9■□□□□ 0.94
AC090503.1-201ENST00000548029 POTEDQ86YR6 584 aa20.52■□□□□ 0.88
AC090503.1-201ENST00000548029 MAPK8IP2Q13387 824 aaPredicted RBP19.2■□□□□ 0.66
AC090503.1-201ENST00000548029 SCAF1Q9H7N4 1312 aaKnown RBP19.06■□□□□ 0.64
AC090503.1-201ENST00000548029 DMRT2Q9Y5R5 561 aa19.05■□□□□ 0.64
AC090503.1-201ENST00000548029 PPP4R3CPQ6ZMV5 832 aa18.73■□□□□ 0.59
AC090503.1-201ENST00000548029 DCAF8L1A6NGE4 600 aa18.37■□□□□ 0.53
AC090503.1-201ENST00000548029 CNKSR2Q8WXI2 1034 aa18.36■□□□□ 0.53
AC090503.1-201ENST00000548029 HOXD11P31277 338 aaPredicted RBP18.32■□□□□ 0.52
AC090503.1-201ENST00000548029 RNF216Q9NWF9 866 aaPredicted RBP18.19■□□□□ 0.5
AC090503.1-201ENST00000548029 NCBP3Q53F19 620 aaKnown RBP18.13■□□□□ 0.49
AC090503.1-201ENST00000548029 CACNB1Q02641 598 aaPredicted RBP18.04■□□□□ 0.48
AC090503.1-201ENST00000548029 KCNA4P22459 653 aa17.95■□□□□ 0.46
AC090503.1-201ENST00000548029 RNF39Q9H2S5 420 aa17.9■□□□□ 0.46
AC090503.1-201ENST00000548029 NPM3O75607 178 aaKnown RBP17.77■□□□□ 0.44
AC090503.1-201ENST00000548029 DNAJC5BQ9UF47 199 aa17.62■□□□□ 0.41
AC090503.1-201ENST00000548029 C1QBPQ07021 282 aaKnown RBP17.61■□□□□ 0.41
AC090503.1-201ENST00000548029 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.52■□□□□ 0.4
AC090503.1-201ENST00000548029 U3KPZ7 1027 aaPredicted RBP17.15■□□□□ 0.34
AC090503.1-201ENST00000548029 SLC4A1APQ9BWU0 796 aaKnown RBP17.12■□□□□ 0.33
AC090503.1-201ENST00000548029 SLC4A2P04920 1241 aa16.95■□□□□ 0.3
AC090503.1-201ENST00000548029 SPINK5Q9NQ38 1064 aaPredicted RBP16.93■□□□□ 0.3
AC090503.1-201ENST00000548029 CAPN15O75808 1086 aa16.91■□□□□ 0.3
AC090503.1-201ENST00000548029 DSG3P32926 999 aa16.76■□□□□ 0.27
AC090503.1-201ENST00000548029 TRHP20396 242 aaPredicted RBP16.64■□□□□ 0.25
AC090503.1-201ENST00000548029 APLP2Q06481 763 aa16.63■□□□□ 0.25
AC090503.1-201ENST00000548029 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.61■□□□□ 0.25
AC090503.1-201ENST00000548029 HNRNPUL2Q1KMD3 747 aaKnown RBP16.61■□□□□ 0.25
AC090503.1-201ENST00000548029 FOXD4L1Q9NU39 408 aa16.61■□□□□ 0.25
AC090503.1-201ENST00000548029 ZNF219Q9P2Y4 722 aaPredicted RBP16.56■□□□□ 0.24
AC090503.1-201ENST00000548029 ABCB7O75027 752 aa16.54■□□□□ 0.24
AC090503.1-201ENST00000548029 SAMD1Q6SPF0 538 aaPredicted RBP16.53■□□□□ 0.24
AC090503.1-201ENST00000548029 MYCNP04198 464 aaPredicted RBP16.48■□□□□ 0.23
AC090503.1-201ENST00000548029 ZBTB22O15209 634 aa16.46■□□□□ 0.23
AC090503.1-201ENST00000548029 EHMT2Q96KQ7 1210 aa16.45■□□□□ 0.22
AC090503.1-201ENST00000548029 CSRNP3Q8WYN3 585 aa16.26■□□□□ 0.19
AC090503.1-201ENST00000548029 POLA2Q14181 598 aa16.14■□□□□ 0.17
AC090503.1-201ENST00000548029 POTEHQ6S545 545 aa16.09■□□□□ 0.17
AC090503.1-201ENST00000548029 ATF5Q9Y2D1 282 aaPredicted RBP16.07■□□□□ 0.16
AC090503.1-201ENST00000548029 ATXN8OSP0DMR3 200 aa16.04■□□□□ 0.16
AC090503.1-201ENST00000548029 RBM42Q9BTD8 480 aaKnown RBP15.99■□□□□ 0.15
AC090503.1-201ENST00000548029 ZBTB12Q9Y330 459 aaPredicted RBP15.8■□□□□ 0.12
AC090503.1-201ENST00000548029 OSCARQ8IYS5 282 aa15.7■□□□□ 0.1
AC090503.1-201ENST00000548029 CHRDL2Q6WN34 429 aa15.67■□□□□ 0.1
AC090503.1-201ENST00000548029 AKT1S1Q96B36 256 aa15.6■□□□□ 0.09
AC090503.1-201ENST00000548029 REM2Q8IYK8 340 aaPredicted RBP15.48■□□□□ 0.07
AC090503.1-201ENST00000548029 FBLN2P98095 1184 aa15.44■□□□□ 0.06
AC090503.1-201ENST00000548029 PITPNM1O00562 1244 aa15.35■□□□□ 0.05
AC090503.1-201ENST00000548029 MKRN4PQ13434 485 aaPredicted RBP15.32■□□□□ 0.04
AC090503.1-201ENST00000548029 SPDYE2BA6NHP3 402 aa15.3■□□□□ 0.04
AC090503.1-201ENST00000548029 SPDYE6P0CI01 402 aa15.3■□□□□ 0.04
AC090503.1-201ENST00000548029 SPDYE2Q495Y8 402 aa15.3■□□□□ 0.04
AC090503.1-201ENST00000548029 PIP4P2Q8N4L2 257 aa15.29■□□□□ 0.04
AC090503.1-201ENST00000548029 FXR2P51116 673 aaKnown RBP eCLIP15.15■□□□□ 0.02
AC090503.1-201ENST00000548029 ZNF692Q9BU19 519 aaPredicted RBP15.14■□□□□ 0.01
AC090503.1-201ENST00000548029 SSUH2Q9Y2M2 353 aa15.11■□□□□ 0.01
AC090503.1-201ENST00000548029 CLEC11AQ9Y240 323 aa15.09■□□□□ 0.01
AC090503.1-201ENST00000548029 SP7Q8TDD2 431 aaPredicted RBP15.07■□□□□ 0
AC090503.1-201ENST00000548029 SPDYE1Q8NFV5 336 aaPredicted RBP15.05■□□□□ -0
AC090503.1-201ENST00000548029 HAX1O00165 279 aa15.03■□□□□ -0
AC090503.1-201ENST00000548029 PRKAR2AP13861 404 aaKnown RBP14.95□□□□□ -0.02
AC090503.1-201ENST00000548029 PABPN1Q86U42 306 aaKnown RBP eCLIP14.94□□□□□ -0.02
AC090503.1-201ENST00000548029 SPDYE4A6NLX3 237 aa14.93□□□□□ -0.02
AC090503.1-201ENST00000548029 EVX2Q03828 476 aa14.83□□□□□ -0.04
AC090503.1-201ENST00000548029 CHADLQ6NUI6 762 aa14.81□□□□□ -0.04
AC090503.1-201ENST00000548029 PRR29P0C7W0 189 aa14.79□□□□□ -0.04
AC090503.1-201ENST00000548029 FKBP8Q14318 412 aa14.79□□□□□ -0.04
AC090503.1-201ENST00000548029 C19orf67A6NJJ6 358 aa14.68□□□□□ -0.06
AC090503.1-201ENST00000548029 PROM2Q8N271 834 aa14.56□□□□□ -0.08
AC090503.1-201ENST00000548029 STAG3Q9UJ98 1225 aa14.56□□□□□ -0.08
AC090503.1-201ENST00000548029 FARP1Q9Y4F1 1045 aaPredicted RBP14.53□□□□□ -0.08
AC090503.1-201ENST00000548029 GABBR2O75899 941 aa14.48□□□□□ -0.09
AC090503.1-201ENST00000548029 CD44P16070 742 aaKnown RBP14.48□□□□□ -0.09
AC090503.1-201ENST00000548029 CREBZFQ9NS37 354 aa14.42□□□□□ -0.1
AC090503.1-201ENST00000548029 FBXO3Q9UK99 471 aa14.35□□□□□ -0.11
AC090503.1-201ENST00000548029 ZRANB1Q9UGI0 708 aa14.27□□□□□ -0.13
AC090503.1-201ENST00000548029 PLEKHG5O94827 1062 aa14.23□□□□□ -0.13
AC090503.1-201ENST00000548029 ZNF579Q8NAF0 562 aaKnown RBP14.22□□□□□ -0.13
AC090503.1-201ENST00000548029 MIER1Q8N108 512 aa14.2□□□□□ -0.14
AC090503.1-201ENST00000548029 POTEIP0CG38 1075 aa14.18□□□□□ -0.14
AC090503.1-201ENST00000548029 PLCD3Q8N3E9 789 aa14.18□□□□□ -0.14
AC090503.1-201ENST00000548029 CLCN6P51797 869 aa14.16□□□□□ -0.14
AC090503.1-201ENST00000548029 MNX1P50219 401 aaPredicted RBP14.15□□□□□ -0.14
AC090503.1-201ENST00000548029 PAK3O75914 559 aaPredicted RBP14.14□□□□□ -0.15
AC090503.1-201ENST00000548029 NPM1P06748 294 aaKnown RBP eCLIP14.14□□□□□ -0.15
AC090503.1-201ENST00000548029 LHX8Q68G74 356 aa14.12□□□□□ -0.15
AC090503.1-201ENST00000548029 DCBLD2Q96PD2 775 aa14.12□□□□□ -0.15
AC090503.1-201ENST00000548029 VASPP50552 380 aaPredicted RBP14.11□□□□□ -0.15
AC090503.1-201ENST00000548029 PHF12Q96QT6 1004 aa14.1□□□□□ -0.15
AC090503.1-201ENST00000548029 GALR2O43603 387 aaPredicted RBP14.09□□□□□ -0.15
AC090503.1-201ENST00000548029 ZBTB47Q9UFB7 747 aaPredicted RBP14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 102.5 ms