RNA–Protein interactions for RNA: ENST00000547777.1

AC008083.3-201, humanhuman

TSL 3 BASIC

Gene AC008083.3, Length 329 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008083.3-201ENST00000547777 AEBP2Q6ZN18 517 aaPredicted RBP23.69■■□□□ 1.38
AC008083.3-201ENST00000547777 CHIC1Q5VXU3 224 aa22.55■■□□□ 1.2
AC008083.3-201ENST00000547777 SENP3Q9H4L4 574 aaPredicted RBP20.08■□□□□ 0.81
AC008083.3-201ENST00000547777 PHF23Q9BUL5 403 aaPredicted RBP19.89■□□□□ 0.77
AC008083.3-201ENST00000547777 FOXD1Q16676 465 aa18.77■□□□□ 0.6
AC008083.3-201ENST00000547777 PLPPR3Q6T4P5 718 aa18.03■□□□□ 0.48
AC008083.3-201ENST00000547777 PPP6R1Q9UPN7 881 aa17.69■□□□□ 0.42
AC008083.3-201ENST00000547777 ADRA2BP18089 450 aa17.61■□□□□ 0.41
AC008083.3-201ENST00000547777 PIAS4Q8N2W9 510 aaPredicted RBP17.53■□□□□ 0.4
AC008083.3-201ENST00000547777 MSH5O43196 834 aa17.43■□□□□ 0.38
AC008083.3-201ENST00000547777 POTEDQ86YR6 584 aa16.88■□□□□ 0.29
AC008083.3-201ENST00000547777 MAPK8IP2Q13387 824 aaPredicted RBP16.16■□□□□ 0.18
AC008083.3-201ENST00000547777 SCAF1Q9H7N4 1312 aaKnown RBP15.98■□□□□ 0.15
AC008083.3-201ENST00000547777 DMRT2Q9Y5R5 561 aa15.97■□□□□ 0.15
AC008083.3-201ENST00000547777 PPP4R3CPQ6ZMV5 832 aa15.85■□□□□ 0.13
AC008083.3-201ENST00000547777 CNKSR2Q8WXI2 1034 aa15.5■□□□□ 0.07
AC008083.3-201ENST00000547777 HOXD11P31277 338 aaPredicted RBP15.44■□□□□ 0.06
AC008083.3-201ENST00000547777 RNF216Q9NWF9 866 aaPredicted RBP15.33■□□□□ 0.04
AC008083.3-201ENST00000547777 DCAF8L1A6NGE4 600 aa15.29■□□□□ 0.04
AC008083.3-201ENST00000547777 NCBP3Q53F19 620 aaKnown RBP15.21■□□□□ 0.03
AC008083.3-201ENST00000547777 NPM3O75607 178 aaKnown RBP15.08■□□□□ 0
AC008083.3-201ENST00000547777 RNF39Q9H2S5 420 aa14.95□□□□□ -0.02
AC008083.3-201ENST00000547777 KCNA4P22459 653 aa14.92□□□□□ -0.02
AC008083.3-201ENST00000547777 CACNB1Q02641 598 aaPredicted RBP14.91□□□□□ -0.02
AC008083.3-201ENST00000547777 DNAJC5BQ9UF47 199 aa14.83□□□□□ -0.04
AC008083.3-201ENST00000547777 C1QBPQ07021 282 aaKnown RBP14.68□□□□□ -0.06
AC008083.3-201ENST00000547777 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.68□□□□□ -0.06
AC008083.3-201ENST00000547777 U3KPZ7 1027 aaPredicted RBP14.44□□□□□ -0.1
AC008083.3-201ENST00000547777 SLC4A2P04920 1241 aa14.4□□□□□ -0.1
AC008083.3-201ENST00000547777 SPINK5Q9NQ38 1064 aaPredicted RBP14.21□□□□□ -0.13
AC008083.3-201ENST00000547777 CAPN15O75808 1086 aa14.12□□□□□ -0.15
AC008083.3-201ENST00000547777 SLC4A1APQ9BWU0 796 aaKnown RBP14.06□□□□□ -0.16
AC008083.3-201ENST00000547777 DSG3P32926 999 aa14.04□□□□□ -0.16
AC008083.3-201ENST00000547777 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.95□□□□□ -0.18
AC008083.3-201ENST00000547777 HNRNPUL2Q1KMD3 747 aaKnown RBP13.95□□□□□ -0.18
AC008083.3-201ENST00000547777 TRHP20396 242 aaPredicted RBP13.93□□□□□ -0.18
AC008083.3-201ENST00000547777 SAMD1Q6SPF0 538 aaPredicted RBP13.92□□□□□ -0.18
AC008083.3-201ENST00000547777 APLP2Q06481 763 aa13.9□□□□□ -0.18
AC008083.3-201ENST00000547777 MYCNP04198 464 aaPredicted RBP13.89□□□□□ -0.19
AC008083.3-201ENST00000547777 ZNF219Q9P2Y4 722 aaPredicted RBP13.87□□□□□ -0.19
AC008083.3-201ENST00000547777 ABCB7O75027 752 aa13.85□□□□□ -0.19
AC008083.3-201ENST00000547777 FOXD4L1Q9NU39 408 aa13.83□□□□□ -0.2
AC008083.3-201ENST00000547777 ZBTB22O15209 634 aa13.77□□□□□ -0.21
AC008083.3-201ENST00000547777 ATF5Q9Y2D1 282 aaPredicted RBP13.67□□□□□ -0.22
AC008083.3-201ENST00000547777 POLA2Q14181 598 aa13.59□□□□□ -0.23
AC008083.3-201ENST00000547777 ATXN8OSP0DMR3 200 aa13.37□□□□□ -0.27
AC008083.3-201ENST00000547777 RBM42Q9BTD8 480 aaKnown RBP13.31□□□□□ -0.28
AC008083.3-201ENST00000547777 ZBTB12Q9Y330 459 aaPredicted RBP13.25□□□□□ -0.29
AC008083.3-201ENST00000547777 POTEHQ6S545 545 aa13.23□□□□□ -0.29
AC008083.3-201ENST00000547777 CSRNP3Q8WYN3 585 aa13.2□□□□□ -0.3
AC008083.3-201ENST00000547777 OSCARQ8IYS5 282 aa13.17□□□□□ -0.3
AC008083.3-201ENST00000547777 EHMT2Q96KQ7 1210 aa13.08□□□□□ -0.32
AC008083.3-201ENST00000547777 AKT1S1Q96B36 256 aa13.07□□□□□ -0.32
AC008083.3-201ENST00000547777 MKRN4PQ13434 485 aaPredicted RBP13.03□□□□□ -0.32
AC008083.3-201ENST00000547777 CHRDL2Q6WN34 429 aa13.03□□□□□ -0.32
AC008083.3-201ENST00000547777 FBLN2P98095 1184 aa12.99□□□□□ -0.33
AC008083.3-201ENST00000547777 REM2Q8IYK8 340 aaPredicted RBP12.97□□□□□ -0.33
AC008083.3-201ENST00000547777 SPDYE2BA6NHP3 402 aa12.9□□□□□ -0.34
AC008083.3-201ENST00000547777 SPDYE6P0CI01 402 aa12.9□□□□□ -0.34
AC008083.3-201ENST00000547777 SPDYE2Q495Y8 402 aa12.9□□□□□ -0.34
AC008083.3-201ENST00000547777 PITPNM1O00562 1244 aa12.85□□□□□ -0.35
AC008083.3-201ENST00000547777 SSUH2Q9Y2M2 353 aa12.78□□□□□ -0.36
AC008083.3-201ENST00000547777 PIP4P2Q8N4L2 257 aa12.77□□□□□ -0.37
AC008083.3-201ENST00000547777 ZNF692Q9BU19 519 aaPredicted RBP12.77□□□□□ -0.37
AC008083.3-201ENST00000547777 FXR2P51116 673 aaKnown RBP eCLIP12.7□□□□□ -0.38
AC008083.3-201ENST00000547777 SPDYE1Q8NFV5 336 aaPredicted RBP12.63□□□□□ -0.39
AC008083.3-201ENST00000547777 CLEC11AQ9Y240 323 aa12.63□□□□□ -0.39
AC008083.3-201ENST00000547777 PABPN1Q86U42 306 aaKnown RBP eCLIP12.6□□□□□ -0.39
AC008083.3-201ENST00000547777 PRKAR2AP13861 404 aaKnown RBP12.49□□□□□ -0.41
AC008083.3-201ENST00000547777 HAX1O00165 279 aa12.47□□□□□ -0.41
AC008083.3-201ENST00000547777 SP7Q8TDD2 431 aaPredicted RBP12.45□□□□□ -0.42
AC008083.3-201ENST00000547777 PRR29P0C7W0 189 aa12.42□□□□□ -0.42
AC008083.3-201ENST00000547777 CHADLQ6NUI6 762 aa12.42□□□□□ -0.42
AC008083.3-201ENST00000547777 SPDYE4A6NLX3 237 aa12.41□□□□□ -0.42
AC008083.3-201ENST00000547777 EVX2Q03828 476 aa12.41□□□□□ -0.42
AC008083.3-201ENST00000547777 C19orf67A6NJJ6 358 aa12.29□□□□□ -0.44
AC008083.3-201ENST00000547777 STAG3Q9UJ98 1225 aa12.22□□□□□ -0.45
AC008083.3-201ENST00000547777 FARP1Q9Y4F1 1045 aaPredicted RBP12.21□□□□□ -0.45
AC008083.3-201ENST00000547777 CREBZFQ9NS37 354 aa12.19□□□□□ -0.46
AC008083.3-201ENST00000547777 PROM2Q8N271 834 aa12.17□□□□□ -0.46
AC008083.3-201ENST00000547777 CD44P16070 742 aaKnown RBP12.1□□□□□ -0.47
AC008083.3-201ENST00000547777 GABBR2O75899 941 aa12.09□□□□□ -0.47
AC008083.3-201ENST00000547777 MNX1P50219 401 aaPredicted RBP12.02□□□□□ -0.49
AC008083.3-201ENST00000547777 ZRANB1Q9UGI0 708 aa11.95□□□□□ -0.5
AC008083.3-201ENST00000547777 FKBP8Q14318 412 aa11.93□□□□□ -0.5
AC008083.3-201ENST00000547777 ZNF579Q8NAF0 562 aaKnown RBP11.92□□□□□ -0.5
AC008083.3-201ENST00000547777 NPM1P06748 294 aaKnown RBP eCLIP11.89□□□□□ -0.51
AC008083.3-201ENST00000547777 POTEIP0CG38 1075 aa11.88□□□□□ -0.51
AC008083.3-201ENST00000547777 CLCN6P51797 869 aa11.83□□□□□ -0.52
AC008083.3-201ENST00000547777 PHF12Q96QT6 1004 aa11.83□□□□□ -0.52
AC008083.3-201ENST00000547777 GALR2O43603 387 aaPredicted RBP11.81□□□□□ -0.52
AC008083.3-201ENST00000547777 PAK3O75914 559 aaPredicted RBP11.81□□□□□ -0.52
AC008083.3-201ENST00000547777 MIER1Q8N108 512 aa11.81□□□□□ -0.52
AC008083.3-201ENST00000547777 TSPYL2Q9H2G4 693 aaPredicted RBP11.74□□□□□ -0.53
AC008083.3-201ENST00000547777 DCBLD2Q96PD2 775 aa11.73□□□□□ -0.53
AC008083.3-201ENST00000547777 PLCD3Q8N3E9 789 aa11.72□□□□□ -0.53
AC008083.3-201ENST00000547777 PLEKHG5O94827 1062 aa11.71□□□□□ -0.53
AC008083.3-201ENST00000547777 RASEFQ8IZ41 740 aa11.7□□□□□ -0.54
AC008083.3-201ENST00000547777 CCDC61Q9Y6R9 512 aa11.69□□□□□ -0.54
AC008083.3-201ENST00000547777 LHX8Q68G74 356 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms