RNA–Protein interactions for RNA: ENST00000547765.5

TUBA1B-204, Transcript of tubulin alpha 1b, humanhuman

TSL 5

Gene TUBA1B, Length 1,875 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-204ENST00000547765 NISCHQ9Y2I1 1504 aa27.49■■□□□ 1.99
TUBA1B-204ENST00000547765 CCDC180Q9P1Z9 1646 aa23.47■■□□□ 1.35
TUBA1B-204ENST00000547765 ZCCHC6Q5VYS8 1495 aaKnown RBP23.28■■□□□ 1.32
TUBA1B-204ENST00000547765 SHROOM4Q9ULL8 1493 aa23.16■■□□□ 1.3
TUBA1B-204ENST00000547765 SUPT5HO00267 1087 aaKnown RBP22.79■■□□□ 1.24
TUBA1B-204ENST00000547765 DCAF1Q9Y4B6 1507 aa22.73■■□□□ 1.23
TUBA1B-204ENST00000547765 DCAF8L2P0C7V8 631 aa22.51■■□□□ 1.19
TUBA1B-204ENST00000547765 CHIC1Q5VXU3 224 aa22.31■■□□□ 1.16
TUBA1B-204ENST00000547765 ABCC9O60706 1549 aa22.21■■□□□ 1.15
TUBA1B-204ENST00000547765 MYO15BQ96JP2 1530 aa22.1■■□□□ 1.13
TUBA1B-204ENST00000547765 SCRIBQ14160 1630 aa21.76■■□□□ 1.07
TUBA1B-204ENST00000547765 RSF1Q96T23 1441 aaPredicted RBP21.73■■□□□ 1.07
TUBA1B-204ENST00000547765 HRCP23327 699 aa21.72■■□□□ 1.07
TUBA1B-204ENST00000547765 NACADO15069 1562 aa21.69■■□□□ 1.06
TUBA1B-204ENST00000547765 RB1CC1Q8TDY2 1594 aa21.56■■□□□ 1.04
TUBA1B-204ENST00000547765 PCGF6Q9BYE7 350 aa21.54■■□□□ 1.04
TUBA1B-204ENST00000547765 LOC105371045A0A1W2PR82 267 aa21.49■■□□□ 1.03
TUBA1B-204ENST00000547765 TRIM41Q8WV44 630 aa21.36■■□□□ 1.01
TUBA1B-204ENST00000547765 TRIM26Q12899 539 aaPredicted RBP21.32■■□□□ 1
TUBA1B-204ENST00000547765 CECR2Q9BXF3 1484 aa21.3■■□□□ 1
TUBA1B-204ENST00000547765 MROH2BQ7Z745 1585 aa21.28■■□□□ 1
TUBA1B-204ENST00000547765 BAZ1AQ9NRL2 1556 aaPredicted RBP21.15■□□□□ 0.98
TUBA1B-204ENST00000547765 WIZO95785 1651 aa21.13■□□□□ 0.97
TUBA1B-204ENST00000547765 UNC13AQ9UPW8 1703 aa21.05■□□□□ 0.96
TUBA1B-204ENST00000547765 ZEB1P37275 1124 aaPredicted RBP21.02■□□□□ 0.96
TUBA1B-204ENST00000547765 PPARGC1BQ86YN6 1023 aaKnown RBP21.01■□□□□ 0.95
TUBA1B-204ENST00000547765 FAM9AQ8IZU1 332 aaPredicted RBP21■□□□□ 0.95
TUBA1B-204ENST00000547765 EIF4G1Q04637 1599 aaKnown RBP20.96■□□□□ 0.95
TUBA1B-204ENST00000547765 TOP2AP11388 1531 aaKnown RBP20.96■□□□□ 0.95
TUBA1B-204ENST00000547765 PABPN1Q86U42 306 aaKnown RBP eCLIP20.91■□□□□ 0.94
TUBA1B-204ENST00000547765 SMARCA4P51532 1647 aa20.91■□□□□ 0.94
TUBA1B-204ENST00000547765 BICRAQ9NZM4 1560 aa20.89■□□□□ 0.93
TUBA1B-204ENST00000547765 CCDC88BA6NC98 1476 aa20.79■□□□□ 0.92
TUBA1B-204ENST00000547765 SMARCA2P51531 1590 aa20.78■□□□□ 0.92
TUBA1B-204ENST00000547765 EEA1Q15075 1411 aa20.67■□□□□ 0.9
TUBA1B-204ENST00000547765 EHMT2Q96KQ7 1210 aa20.66■□□□□ 0.9
TUBA1B-204ENST00000547765 ABCC8Q09428 1581 aa20.62■□□□□ 0.89
TUBA1B-204ENST00000547765 PEG3Q9GZU2 1588 aa20.61■□□□□ 0.89
TUBA1B-204ENST00000547765 WRNQ14191 1432 aaPredicted RBP eCLIP20.6■□□□□ 0.89
TUBA1B-204ENST00000547765 TNIKQ9UKE5 1360 aa20.55■□□□□ 0.88
TUBA1B-204ENST00000547765 CSRNP3Q8WYN3 585 aa20.48■□□□□ 0.87
TUBA1B-204ENST00000547765 SOGA1O94964 1423 aa20.48■□□□□ 0.87
TUBA1B-204ENST00000547765 CEP162Q5TB80 1403 aa20.48■□□□□ 0.87
TUBA1B-204ENST00000547765 GOLGA3Q08378 1498 aa20.4■□□□□ 0.86
TUBA1B-204ENST00000547765 ATAD2BQ9ULI0 1458 aa20.37■□□□□ 0.85
TUBA1B-204ENST00000547765 RUSC2Q8N2Y8 1516 aa20.32■□□□□ 0.84
TUBA1B-204ENST00000547765 UBTFP17480 764 aaKnown RBP20.32■□□□□ 0.84
TUBA1B-204ENST00000547765 CCER1Q8TC90 406 aaPredicted RBP20.32■□□□□ 0.84
TUBA1B-204ENST00000547765 BAZ1BQ9UIG0 1483 aaKnown RBP20.31■□□□□ 0.84
TUBA1B-204ENST00000547765 CEP164Q9UPV0 1460 aa20.3■□□□□ 0.84
TUBA1B-204ENST00000547765 KIF21BO75037 1637 aa20.28■□□□□ 0.84
TUBA1B-204ENST00000547765 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.26■□□□□ 0.83
TUBA1B-204ENST00000547765 SYNJ1O43426 1573 aa20.25■□□□□ 0.83
TUBA1B-204ENST00000547765 CLIP1P30622 1438 aa20.12■□□□□ 0.81
TUBA1B-204ENST00000547765 TOP2BQ02880 1626 aa20.1■□□□□ 0.81
TUBA1B-204ENST00000547765 VPS8Q8N3P4 1428 aa20.07■□□□□ 0.8
TUBA1B-204ENST00000547765 HMGXB3Q12766 1538 aa20.06■□□□□ 0.8
TUBA1B-204ENST00000547765 CC2D2AQ9P2K1 1620 aa20.05■□□□□ 0.8
TUBA1B-204ENST00000547765 BIVM-ERCC5R4GMW8 1640 aa20.05■□□□□ 0.8
TUBA1B-204ENST00000547765 TTBK1Q5TCY1 1321 aaPredicted RBP20.04■□□□□ 0.8
TUBA1B-204ENST00000547765 NCAPD3P42695 1498 aa20.04■□□□□ 0.8
TUBA1B-204ENST00000547765 RAPGEF2Q9Y4G8 1499 aa20.01■□□□□ 0.79
TUBA1B-204ENST00000547765 APLP2Q06481 763 aa19.99■□□□□ 0.79
TUBA1B-204ENST00000547765 ERICH3Q5RHP9 1530 aa19.98■□□□□ 0.79
TUBA1B-204ENST00000547765 DIEXFQ68CQ4 756 aaKnown RBP19.95■□□□□ 0.78
TUBA1B-204ENST00000547765 PRXQ9BXM0 1461 aa19.92■□□□□ 0.78
TUBA1B-204ENST00000547765 SCAF1Q9H7N4 1312 aaKnown RBP19.9■□□□□ 0.78
TUBA1B-204ENST00000547765 PELP1Q8IZL8 1130 aaKnown RBP19.87■□□□□ 0.77
TUBA1B-204ENST00000547765 ZNF316A6NFI3 1004 aaPredicted RBP19.86■□□□□ 0.77
TUBA1B-204ENST00000547765 CFTRP13569 1480 aa19.85■□□□□ 0.77
TUBA1B-204ENST00000547765 KIF27Q86VH2 1401 aa19.84■□□□□ 0.77
TUBA1B-204ENST00000547765 ACIN1Q9UKV3 1341 aaKnown RBP19.84■□□□□ 0.77
TUBA1B-204ENST00000547765 CUX1P39880 1505 aa19.83■□□□□ 0.77
TUBA1B-204ENST00000547765 DNAJC5BQ9UF47 199 aa19.83■□□□□ 0.76
TUBA1B-204ENST00000547765 CENPBP07199 599 aaPredicted RBP19.82■□□□□ 0.76
TUBA1B-204ENST00000547765 HNRNPUL2Q1KMD3 747 aaKnown RBP19.82■□□□□ 0.76
TUBA1B-204ENST00000547765 ARAP1Q96P48 1450 aa19.77■□□□□ 0.76
TUBA1B-204ENST00000547765 CLSPNQ9HAW4 1339 aa19.75■□□□□ 0.75
TUBA1B-204ENST00000547765 PRDM2Q13029 1718 aa19.71■□□□□ 0.75
TUBA1B-204ENST00000547765 NEUROD1Q13562 356 aa19.69■□□□□ 0.74
TUBA1B-204ENST00000547765 RANGAP1P46060 587 aaPredicted RBP19.68■□□□□ 0.74
TUBA1B-204ENST00000547765 RRBP1Q9P2E9 1410 aaKnown RBP19.63■□□□□ 0.73
TUBA1B-204ENST00000547765 CADPSQ9ULU8 1353 aa19.62■□□□□ 0.73
TUBA1B-204ENST00000547765 ARHGAP35Q9NRY4 1499 aa19.59■□□□□ 0.73
TUBA1B-204ENST00000547765 IGF1RP08069 1367 aa19.57■□□□□ 0.72
TUBA1B-204ENST00000547765 KANK4Q5T7N3 995 aaPredicted RBP19.57■□□□□ 0.72
TUBA1B-204ENST00000547765 CUX2O14529 1486 aa19.56■□□□□ 0.72
TUBA1B-204ENST00000547765 DHX57Q6P158 1386 aaKnown RBP19.56■□□□□ 0.72
TUBA1B-204ENST00000547765 MAP3K1Q13233 1512 aa19.56■□□□□ 0.72
TUBA1B-204ENST00000547765 GTF3C3Q9Y5Q9 886 aa19.52■□□□□ 0.71
TUBA1B-204ENST00000547765 CCNB3Q8WWL7 1395 aa19.51■□□□□ 0.71
TUBA1B-204ENST00000547765 CARMIL1Q5VZK9 1371 aa19.5■□□□□ 0.71
TUBA1B-204ENST00000547765 FGD5Q6ZNL6 1462 aa19.48■□□□□ 0.71
TUBA1B-204ENST00000547765 MIER1Q8N108 512 aa19.46■□□□□ 0.71
TUBA1B-204ENST00000547765 NESP48681 1621 aa19.42■□□□□ 0.7
TUBA1B-204ENST00000547765 TIAM1Q13009 1591 aa19.42■□□□□ 0.7
TUBA1B-204ENST00000547765 FHAD1B1AJZ9 1412 aa19.41■□□□□ 0.7
TUBA1B-204ENST00000547765 FANCD2Q9BXW9 1451 aa19.39■□□□□ 0.69
TUBA1B-204ENST00000547765 DNMBPQ6XZF7 1577 aa19.36■□□□□ 0.69
TUBA1B-204ENST00000547765 LRRC9Q6ZRR7 1453 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms