RNA–Protein interactions for RNA: ENST00000547033.1

AC016993.1-201, humanhuman

TSL 3 BASIC

Gene AC016993.1, Length 1,258 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC016993.1-201ENST00000547033 AEBP2Q6ZN18 517 aaPredicted RBP31.27■■■□□ 2.6
AC016993.1-201ENST00000547033 CHIC1Q5VXU3 224 aa29.45■■■□□ 2.31
AC016993.1-201ENST00000547033 SENP3Q9H4L4 574 aaPredicted RBP26.78■■□□□ 1.88
AC016993.1-201ENST00000547033 PHF23Q9BUL5 403 aaPredicted RBP26.37■■□□□ 1.81
AC016993.1-201ENST00000547033 FOXD1Q16676 465 aa24.96■■□□□ 1.59
AC016993.1-201ENST00000547033 POTEDQ86YR6 584 aa23.83■■□□□ 1.41
AC016993.1-201ENST00000547033 MSH5O43196 834 aa23.56■■□□□ 1.36
AC016993.1-201ENST00000547033 PLPPR3Q6T4P5 718 aa23.44■■□□□ 1.34
AC016993.1-201ENST00000547033 PIAS4Q8N2W9 510 aaPredicted RBP23.3■■□□□ 1.32
AC016993.1-201ENST00000547033 PPP6R1Q9UPN7 881 aa23.1■■□□□ 1.29
AC016993.1-201ENST00000547033 ADRA2BP18089 450 aa23.04■■□□□ 1.28
AC016993.1-201ENST00000547033 MAPK8IP2Q13387 824 aaPredicted RBP21.24■□□□□ 0.99
AC016993.1-201ENST00000547033 DMRT2Q9Y5R5 561 aa21.17■□□□□ 0.98
AC016993.1-201ENST00000547033 SCAF1Q9H7N4 1312 aaKnown RBP21.15■□□□□ 0.98
AC016993.1-201ENST00000547033 CACNB1Q02641 598 aaPredicted RBP20.56■□□□□ 0.88
AC016993.1-201ENST00000547033 PPP4R3CPQ6ZMV5 832 aa20.49■□□□□ 0.87
AC016993.1-201ENST00000547033 DCAF8L1A6NGE4 600 aa20.4■□□□□ 0.86
AC016993.1-201ENST00000547033 HOXD11P31277 338 aaPredicted RBP20.26■□□□□ 0.83
AC016993.1-201ENST00000547033 CNKSR2Q8WXI2 1034 aa20.18■□□□□ 0.82
AC016993.1-201ENST00000547033 RNF216Q9NWF9 866 aaPredicted RBP20.07■□□□□ 0.8
AC016993.1-201ENST00000547033 RNF39Q9H2S5 420 aa20.04■□□□□ 0.8
AC016993.1-201ENST00000547033 C1QBPQ07021 282 aaKnown RBP19.73■□□□□ 0.75
AC016993.1-201ENST00000547033 NCBP3Q53F19 620 aaKnown RBP19.67■□□□□ 0.74
AC016993.1-201ENST00000547033 DNAJC5BQ9UF47 199 aa19.62■□□□□ 0.73
AC016993.1-201ENST00000547033 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.39■□□□□ 0.69
AC016993.1-201ENST00000547033 NPM3O75607 178 aaKnown RBP19.32■□□□□ 0.68
AC016993.1-201ENST00000547033 KCNA4P22459 653 aa19.05■□□□□ 0.64
AC016993.1-201ENST00000547033 U3KPZ7 1027 aaPredicted RBP18.88■□□□□ 0.61
AC016993.1-201ENST00000547033 CAPN15O75808 1086 aa18.74■□□□□ 0.59
AC016993.1-201ENST00000547033 SPINK5Q9NQ38 1064 aaPredicted RBP18.7■□□□□ 0.58
AC016993.1-201ENST00000547033 DSG3P32926 999 aa18.64■□□□□ 0.57
AC016993.1-201ENST00000547033 POTEHQ6S545 545 aa18.59■□□□□ 0.57
AC016993.1-201ENST00000547033 SLC4A2P04920 1241 aa18.5■□□□□ 0.55
AC016993.1-201ENST00000547033 APLP2Q06481 763 aa18.41■□□□□ 0.54
AC016993.1-201ENST00000547033 TRHP20396 242 aaPredicted RBP18.37■□□□□ 0.53
AC016993.1-201ENST00000547033 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.32■□□□□ 0.52
AC016993.1-201ENST00000547033 HNRNPUL2Q1KMD3 747 aaKnown RBP18.32■□□□□ 0.52
AC016993.1-201ENST00000547033 ZNF219Q9P2Y4 722 aaPredicted RBP18.32■□□□□ 0.52
AC016993.1-201ENST00000547033 ABCB7O75027 752 aa18.26■□□□□ 0.51
AC016993.1-201ENST00000547033 SAMD1Q6SPF0 538 aaPredicted RBP18.19■□□□□ 0.5
AC016993.1-201ENST00000547033 SLC4A1APQ9BWU0 796 aaKnown RBP18.15■□□□□ 0.5
AC016993.1-201ENST00000547033 MYCNP04198 464 aaPredicted RBP17.91■□□□□ 0.46
AC016993.1-201ENST00000547033 RBM42Q9BTD8 480 aaKnown RBP17.85■□□□□ 0.45
AC016993.1-201ENST00000547033 EHMT2Q96KQ7 1210 aa17.8■□□□□ 0.44
AC016993.1-201ENST00000547033 POLA2Q14181 598 aa17.79■□□□□ 0.44
AC016993.1-201ENST00000547033 FOXD4L1Q9NU39 408 aa17.65■□□□□ 0.42
AC016993.1-201ENST00000547033 CHRDL2Q6WN34 429 aa17.6■□□□□ 0.41
AC016993.1-201ENST00000547033 ATF5Q9Y2D1 282 aaPredicted RBP17.47■□□□□ 0.39
AC016993.1-201ENST00000547033 ZBTB22O15209 634 aa17.46■□□□□ 0.39
AC016993.1-201ENST00000547033 ZBTB12Q9Y330 459 aaPredicted RBP17.43■□□□□ 0.38
AC016993.1-201ENST00000547033 AKT1S1Q96B36 256 aa17.35■□□□□ 0.37
AC016993.1-201ENST00000547033 OSCARQ8IYS5 282 aa17.23■□□□□ 0.35
AC016993.1-201ENST00000547033 CSRNP3Q8WYN3 585 aa17.2■□□□□ 0.34
AC016993.1-201ENST00000547033 SP7Q8TDD2 431 aaPredicted RBP17.19■□□□□ 0.34
AC016993.1-201ENST00000547033 REM2Q8IYK8 340 aaPredicted RBP17.18■□□□□ 0.34
AC016993.1-201ENST00000547033 PIP4P2Q8N4L2 257 aa17.06■□□□□ 0.32
AC016993.1-201ENST00000547033 ATXN8OSP0DMR3 200 aa17.05■□□□□ 0.32
AC016993.1-201ENST00000547033 PITPNM1O00562 1244 aa16.99■□□□□ 0.31
AC016993.1-201ENST00000547033 HAX1O00165 279 aa16.94■□□□□ 0.3
AC016993.1-201ENST00000547033 FBLN2P98095 1184 aa16.9■□□□□ 0.3
AC016993.1-201ENST00000547033 FXR2P51116 673 aaKnown RBP eCLIP16.89■□□□□ 0.29
AC016993.1-201ENST00000547033 SPDYE2BA6NHP3 402 aa16.84■□□□□ 0.29
AC016993.1-201ENST00000547033 SPDYE6P0CI01 402 aa16.84■□□□□ 0.29
AC016993.1-201ENST00000547033 SPDYE2Q495Y8 402 aa16.84■□□□□ 0.29
AC016993.1-201ENST00000547033 EVX2Q03828 476 aa16.65■□□□□ 0.26
AC016993.1-201ENST00000547033 MKRN4PQ13434 485 aaPredicted RBP16.65■□□□□ 0.26
AC016993.1-201ENST00000547033 SPDYE1Q8NFV5 336 aaPredicted RBP16.64■□□□□ 0.25
AC016993.1-201ENST00000547033 CLEC11AQ9Y240 323 aa16.64■□□□□ 0.25
AC016993.1-201ENST00000547033 ZNF692Q9BU19 519 aaPredicted RBP16.62■□□□□ 0.25
AC016993.1-201ENST00000547033 PRKAR2AP13861 404 aaKnown RBP16.57■□□□□ 0.24
AC016993.1-201ENST00000547033 SSUH2Q9Y2M2 353 aa16.56■□□□□ 0.24
AC016993.1-201ENST00000547033 C19orf67A6NJJ6 358 aa16.36■□□□□ 0.21
AC016993.1-201ENST00000547033 PABPN1Q86U42 306 aaKnown RBP eCLIP16.36■□□□□ 0.21
AC016993.1-201ENST00000547033 PRR29P0C7W0 189 aa16.32■□□□□ 0.2
AC016993.1-201ENST00000547033 CHADLQ6NUI6 762 aa16.31■□□□□ 0.2
AC016993.1-201ENST00000547033 SLC24A1O60721 1099 aa16.25■□□□□ 0.19
AC016993.1-201ENST00000547033 GABBR2O75899 941 aa16.25■□□□□ 0.19
AC016993.1-201ENST00000547033 LHX8Q68G74 356 aa16.14■□□□□ 0.17
AC016993.1-201ENST00000547033 FARP1Q9Y4F1 1045 aaPredicted RBP16.05■□□□□ 0.16
AC016993.1-201ENST00000547033 CD44P16070 742 aaKnown RBP16.04■□□□□ 0.16
AC016993.1-201ENST00000547033 RTN4Q9NQC3 1192 aaKnown RBP15.98■□□□□ 0.15
AC016993.1-201ENST00000547033 AMER1Q5JTC6 1135 aaPredicted RBP15.94■□□□□ 0.14
AC016993.1-201ENST00000547033 POTEIP0CG38 1075 aa15.88■□□□□ 0.13
AC016993.1-201ENST00000547033 CLCN6P51797 869 aa15.88■□□□□ 0.13
AC016993.1-201ENST00000547033 SPDYE4A6NLX3 237 aa15.86■□□□□ 0.13
AC016993.1-201ENST00000547033 STAG3Q9UJ98 1225 aa15.86■□□□□ 0.13
AC016993.1-201ENST00000547033 CREBZFQ9NS37 354 aa15.8■□□□□ 0.12
AC016993.1-201ENST00000547033 DCBLD2Q96PD2 775 aa15.77■□□□□ 0.12
AC016993.1-201ENST00000547033 ZRANB1Q9UGI0 708 aa15.77■□□□□ 0.12
AC016993.1-201ENST00000547033 ZNF579Q8NAF0 562 aaKnown RBP15.75■□□□□ 0.11
AC016993.1-201ENST00000547033 FKBP8Q14318 412 aa15.64■□□□□ 0.09
AC016993.1-201ENST00000547033 PAK3O75914 559 aaPredicted RBP15.63■□□□□ 0.09
AC016993.1-201ENST00000547033 GALR2O43603 387 aaPredicted RBP15.58■□□□□ 0.08
AC016993.1-201ENST00000547033 NPM1P06748 294 aaKnown RBP eCLIP15.57■□□□□ 0.08
AC016993.1-201ENST00000547033 PLSCR2Q9NRY7 297 aa15.57■□□□□ 0.08
AC016993.1-201ENST00000547033 PHF12Q96QT6 1004 aa15.51■□□□□ 0.07
AC016993.1-201ENST00000547033 MNX1P50219 401 aaPredicted RBP15.46■□□□□ 0.07
AC016993.1-201ENST00000547033 PROM2Q8N271 834 aa15.45■□□□□ 0.06
AC016993.1-201ENST00000547033 OTUD5Q96G74 571 aa15.4■□□□□ 0.06
AC016993.1-201ENST00000547033 POTEB2H3BUK9 544 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms