RNA–Protein interactions for RNA: ENST00000546226.5

HMBS-224, Transcript of hydroxymethylbilane synthase, humanhuman

TSL 2

Gene HMBS, Length 2,112 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBS-224ENST00000546226 NISCHQ9Y2I1 1504 aa30.96■■■□□ 2.55
HMBS-224ENST00000546226 SHROOM4Q9ULL8 1493 aa26.34■■□□□ 1.81
HMBS-224ENST00000546226 CCDC180Q9P1Z9 1646 aa26.29■■□□□ 1.8
HMBS-224ENST00000546226 ZCCHC6Q5VYS8 1495 aaKnown RBP26.28■■□□□ 1.8
HMBS-224ENST00000546226 SUPT5HO00267 1087 aaKnown RBP25.99■■□□□ 1.75
HMBS-224ENST00000546226 DCAF1Q9Y4B6 1507 aa25.54■■□□□ 1.68
HMBS-224ENST00000546226 CHIC1Q5VXU3 224 aa25.54■■□□□ 1.68
HMBS-224ENST00000546226 MYO15BQ96JP2 1530 aa25.49■■□□□ 1.67
HMBS-224ENST00000546226 HRCP23327 699 aa25.29■■□□□ 1.64
HMBS-224ENST00000546226 DCAF8L2P0C7V8 631 aa25.28■■□□□ 1.64
HMBS-224ENST00000546226 PCGF6Q9BYE7 350 aa24.95■■□□□ 1.59
HMBS-224ENST00000546226 ABCC9O60706 1549 aa24.86■■□□□ 1.57
HMBS-224ENST00000546226 LOC105371045A0A1W2PR82 267 aa24.67■■□□□ 1.54
HMBS-224ENST00000546226 RSF1Q96T23 1441 aaPredicted RBP24.58■■□□□ 1.52
HMBS-224ENST00000546226 TRIM26Q12899 539 aaPredicted RBP24.56■■□□□ 1.52
HMBS-224ENST00000546226 PPARGC1BQ86YN6 1023 aaKnown RBP24.52■■□□□ 1.52
HMBS-224ENST00000546226 SCRIBQ14160 1630 aa24.5■■□□□ 1.51
HMBS-224ENST00000546226 RB1CC1Q8TDY2 1594 aa24.42■■□□□ 1.5
HMBS-224ENST00000546226 TRIM41Q8WV44 630 aa24.29■■□□□ 1.48
HMBS-224ENST00000546226 ZEB1P37275 1124 aaPredicted RBP24.25■■□□□ 1.47
HMBS-224ENST00000546226 NACADO15069 1562 aa24.21■■□□□ 1.47
HMBS-224ENST00000546226 CECR2Q9BXF3 1484 aa24.02■■□□□ 1.44
HMBS-224ENST00000546226 MROH2BQ7Z745 1585 aa24.02■■□□□ 1.44
HMBS-224ENST00000546226 FAM9AQ8IZU1 332 aaPredicted RBP23.95■■□□□ 1.42
HMBS-224ENST00000546226 WIZO95785 1651 aa23.89■■□□□ 1.42
HMBS-224ENST00000546226 BAZ1AQ9NRL2 1556 aaPredicted RBP23.88■■□□□ 1.41
HMBS-224ENST00000546226 EIF4G1Q04637 1599 aaKnown RBP23.82■■□□□ 1.4
HMBS-224ENST00000546226 TOP2AP11388 1531 aaKnown RBP23.62■■□□□ 1.37
HMBS-224ENST00000546226 EHMT2Q96KQ7 1210 aa23.62■■□□□ 1.37
HMBS-224ENST00000546226 WRNQ14191 1432 aaPredicted RBP eCLIP23.54■■□□□ 1.36
HMBS-224ENST00000546226 SMARCA4P51532 1647 aa23.52■■□□□ 1.36
HMBS-224ENST00000546226 PELP1Q8IZL8 1130 aaKnown RBP23.5■■□□□ 1.35
HMBS-224ENST00000546226 SMARCA2P51531 1590 aa23.47■■□□□ 1.35
HMBS-224ENST00000546226 CCDC88BA6NC98 1476 aa23.46■■□□□ 1.35
HMBS-224ENST00000546226 ABCC8Q09428 1581 aa23.42■■□□□ 1.34
HMBS-224ENST00000546226 SCAF1Q9H7N4 1312 aaKnown RBP23.41■■□□□ 1.34
HMBS-224ENST00000546226 EEA1Q15075 1411 aa23.4■■□□□ 1.34
HMBS-224ENST00000546226 CCER1Q8TC90 406 aaPredicted RBP23.39■■□□□ 1.34
HMBS-224ENST00000546226 CEP162Q5TB80 1403 aa23.37■■□□□ 1.33
HMBS-224ENST00000546226 TNIKQ9UKE5 1360 aa23.37■■□□□ 1.33
HMBS-224ENST00000546226 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.36■■□□□ 1.33
HMBS-224ENST00000546226 UNC13AQ9UPW8 1703 aa23.31■■□□□ 1.32
HMBS-224ENST00000546226 SOGA1O94964 1423 aa23.27■■□□□ 1.32
HMBS-224ENST00000546226 CSRNP3Q8WYN3 585 aa23.21■■□□□ 1.31
HMBS-224ENST00000546226 GOLGA3Q08378 1498 aa23.17■■□□□ 1.3
HMBS-224ENST00000546226 ACIN1Q9UKV3 1341 aaKnown RBP23.16■■□□□ 1.3
HMBS-224ENST00000546226 PEG3Q9GZU2 1588 aa23.14■■□□□ 1.3
HMBS-224ENST00000546226 DIEXFQ68CQ4 756 aaKnown RBP23.12■■□□□ 1.29
HMBS-224ENST00000546226 RUSC2Q8N2Y8 1516 aa23.11■■□□□ 1.29
HMBS-224ENST00000546226 UBTFP17480 764 aaKnown RBP23.06■■□□□ 1.28
HMBS-224ENST00000546226 KIF21BO75037 1637 aa23.04■■□□□ 1.28
HMBS-224ENST00000546226 CENPBP07199 599 aaPredicted RBP23.03■■□□□ 1.28
HMBS-224ENST00000546226 CEP164Q9UPV0 1460 aa23.03■■□□□ 1.28
HMBS-224ENST00000546226 NEUROD1Q13562 356 aa23.02■■□□□ 1.28
HMBS-224ENST00000546226 BICRAQ9NZM4 1560 aa23.02■■□□□ 1.28
HMBS-224ENST00000546226 TTBK1Q5TCY1 1321 aaPredicted RBP22.97■■□□□ 1.27
HMBS-224ENST00000546226 SYNJ1O43426 1573 aa22.94■■□□□ 1.26
HMBS-224ENST00000546226 BAZ1BQ9UIG0 1483 aaKnown RBP22.92■■□□□ 1.26
HMBS-224ENST00000546226 ZNF316A6NFI3 1004 aaPredicted RBP22.91■■□□□ 1.26
HMBS-224ENST00000546226 CLIP1P30622 1438 aa22.87■■□□□ 1.25
HMBS-224ENST00000546226 VPS8Q8N3P4 1428 aa22.86■■□□□ 1.25
HMBS-224ENST00000546226 PABPN1Q86U42 306 aaKnown RBP eCLIP22.85■■□□□ 1.25
HMBS-224ENST00000546226 GTF3C3Q9Y5Q9 886 aa22.83■■□□□ 1.25
HMBS-224ENST00000546226 ATAD2BQ9ULI0 1458 aa22.83■■□□□ 1.24
HMBS-224ENST00000546226 RAPGEF2Q9Y4G8 1499 aa22.72■■□□□ 1.23
HMBS-224ENST00000546226 TOP2BQ02880 1626 aa22.71■■□□□ 1.23
HMBS-224ENST00000546226 APLP2Q06481 763 aa22.68■■□□□ 1.22
HMBS-224ENST00000546226 HNRNPUL2Q1KMD3 747 aaKnown RBP22.67■■□□□ 1.22
HMBS-224ENST00000546226 BIVM-ERCC5R4GMW8 1640 aa22.64■■□□□ 1.21
HMBS-224ENST00000546226 ERICH3Q5RHP9 1530 aa22.63■■□□□ 1.21
HMBS-224ENST00000546226 CLSPNQ9HAW4 1339 aa22.6■■□□□ 1.21
HMBS-224ENST00000546226 PRXQ9BXM0 1461 aa22.56■■□□□ 1.2
HMBS-224ENST00000546226 MIER1Q8N108 512 aa22.54■■□□□ 1.2
HMBS-224ENST00000546226 ARAP1Q96P48 1450 aa22.48■■□□□ 1.19
HMBS-224ENST00000546226 YTHDC1Q96MU7 727 aaKnown RBP22.45■■□□□ 1.18
HMBS-224ENST00000546226 MYT1Q01538 1121 aa22.45■■□□□ 1.18
HMBS-224ENST00000546226 HMGXB3Q12766 1538 aa22.43■■□□□ 1.18
HMBS-224ENST00000546226 DHX57Q6P158 1386 aaKnown RBP22.43■■□□□ 1.18
HMBS-224ENST00000546226 RRBP1Q9P2E9 1410 aaKnown RBP22.4■■□□□ 1.18
HMBS-224ENST00000546226 NCAPD3P42695 1498 aa22.37■■□□□ 1.17
HMBS-224ENST00000546226 CUX2O14529 1486 aa22.37■■□□□ 1.17
HMBS-224ENST00000546226 KIF27Q86VH2 1401 aa22.36■■□□□ 1.17
HMBS-224ENST00000546226 CUX1P39880 1505 aa22.36■■□□□ 1.17
HMBS-224ENST00000546226 RANGAP1P46060 587 aaPredicted RBP22.35■■□□□ 1.17
HMBS-224ENST00000546226 KANK4Q5T7N3 995 aaPredicted RBP22.29■■□□□ 1.16
HMBS-224ENST00000546226 CFTRP13569 1480 aa22.27■■□□□ 1.15
HMBS-224ENST00000546226 ARHGAP35Q9NRY4 1499 aa22.23■■□□□ 1.15
HMBS-224ENST00000546226 CCNB3Q8WWL7 1395 aa22.23■■□□□ 1.15
HMBS-224ENST00000546226 MAP3K1Q13233 1512 aa22.19■■□□□ 1.14
HMBS-224ENST00000546226 PRDM2Q13029 1718 aa22.16■■□□□ 1.14
HMBS-224ENST00000546226 TIAM1Q13009 1591 aa22.09■■□□□ 1.13
HMBS-224ENST00000546226 IGF1RP08069 1367 aa22.06■■□□□ 1.12
HMBS-224ENST00000546226 MAPKBP1O60336 1514 aa22.03■■□□□ 1.12
HMBS-224ENST00000546226 RAB3GAP2Q9H2M9 1393 aa22.03■■□□□ 1.12
HMBS-224ENST00000546226 LRRC9Q6ZRR7 1453 aa21.99■■□□□ 1.11
HMBS-224ENST00000546226 SUPT16HQ9Y5B9 1047 aaKnown RBP21.98■■□□□ 1.11
HMBS-224ENST00000546226 SETD5Q9C0A6 1442 aa21.97■■□□□ 1.11
HMBS-224ENST00000546226 CARMIL1Q5VZK9 1371 aa21.96■■□□□ 1.11
HMBS-224ENST00000546226 FHAD1B1AJZ9 1412 aa21.96■■□□□ 1.11
HMBS-224ENST00000546226 CFAP43Q8NDM7 1665 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms