RNA–Protein interactions for RNA: ENST00000545297.5

SURF4-207, Transcript of surfeit 4, humanhuman

TSL 2 BASIC

Gene SURF4, Length 2,863 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SURF4-207ENST00000545297 NISCHQ9Y2I1 1504 aa33.96■■■■□ 3.03
SURF4-207ENST00000545297 SHROOM4Q9ULL8 1493 aa29.57■■■□□ 2.32
SURF4-207ENST00000545297 CCDC180Q9P1Z9 1646 aa29.05■■■□□ 2.24
SURF4-207ENST00000545297 DCAF8L2P0C7V8 631 aa29.03■■■□□ 2.24
SURF4-207ENST00000545297 SUPT5HO00267 1087 aaKnown RBP28.89■■■□□ 2.22
SURF4-207ENST00000545297 ZCCHC6Q5VYS8 1495 aaKnown RBP28.53■■■□□ 2.16
SURF4-207ENST00000545297 ABCC9O60706 1549 aa28.02■■■□□ 2.08
SURF4-207ENST00000545297 CHIC1Q5VXU3 224 aa27.64■■■□□ 2.02
SURF4-207ENST00000545297 DCAF1Q9Y4B6 1507 aa27.63■■■□□ 2.01
SURF4-207ENST00000545297 MYO15BQ96JP2 1530 aa27.59■■■□□ 2.01
SURF4-207ENST00000545297 SCRIBQ14160 1630 aa27.46■■□□□ 1.99
SURF4-207ENST00000545297 LOC105371045A0A1W2PR82 267 aa27.2■■□□□ 1.94
SURF4-207ENST00000545297 NACADO15069 1562 aa27.11■■□□□ 1.93
SURF4-207ENST00000545297 EHMT2Q96KQ7 1210 aa26.99■■□□□ 1.91
SURF4-207ENST00000545297 PCGF6Q9BYE7 350 aa26.94■■□□□ 1.9
SURF4-207ENST00000545297 RB1CC1Q8TDY2 1594 aa26.91■■□□□ 1.9
SURF4-207ENST00000545297 FAM9AQ8IZU1 332 aaPredicted RBP26.85■■□□□ 1.89
SURF4-207ENST00000545297 RSF1Q96T23 1441 aaPredicted RBP26.84■■□□□ 1.89
SURF4-207ENST00000545297 PABPN1Q86U42 306 aaKnown RBP eCLIP26.76■■□□□ 1.88
SURF4-207ENST00000545297 CECR2Q9BXF3 1484 aa26.72■■□□□ 1.87
SURF4-207ENST00000545297 TRIM41Q8WV44 630 aa26.62■■□□□ 1.85
SURF4-207ENST00000545297 UNC13AQ9UPW8 1703 aa26.52■■□□□ 1.84
SURF4-207ENST00000545297 PPARGC1BQ86YN6 1023 aaKnown RBP26.5■■□□□ 1.83
SURF4-207ENST00000545297 MROH2BQ7Z745 1585 aa26.48■■□□□ 1.83
SURF4-207ENST00000545297 HRCP23327 699 aa26.45■■□□□ 1.83
SURF4-207ENST00000545297 WIZO95785 1651 aa26.34■■□□□ 1.81
SURF4-207ENST00000545297 BICRAQ9NZM4 1560 aa26.23■■□□□ 1.79
SURF4-207ENST00000545297 BAZ1AQ9NRL2 1556 aaPredicted RBP26.11■■□□□ 1.77
SURF4-207ENST00000545297 TRIM26Q12899 539 aaPredicted RBP26.03■■□□□ 1.76
SURF4-207ENST00000545297 SMARCA4P51532 1647 aa26.03■■□□□ 1.76
SURF4-207ENST00000545297 TTBK1Q5TCY1 1321 aaPredicted RBP25.99■■□□□ 1.75
SURF4-207ENST00000545297 ABCC8Q09428 1581 aa25.87■■□□□ 1.73
SURF4-207ENST00000545297 CCDC88BA6NC98 1476 aa25.78■■□□□ 1.72
SURF4-207ENST00000545297 TOP2AP11388 1531 aaKnown RBP25.74■■□□□ 1.71
SURF4-207ENST00000545297 SMARCA2P51531 1590 aa25.63■■□□□ 1.69
SURF4-207ENST00000545297 SOGA1O94964 1423 aa25.61■■□□□ 1.69
SURF4-207ENST00000545297 ATAD2BQ9ULI0 1458 aa25.59■■□□□ 1.69
SURF4-207ENST00000545297 EIF4G1Q04637 1599 aaKnown RBP25.58■■□□□ 1.68
SURF4-207ENST00000545297 RUSC2Q8N2Y8 1516 aa25.56■■□□□ 1.68
SURF4-207ENST00000545297 RANGAP1P46060 587 aaPredicted RBP25.53■■□□□ 1.68
SURF4-207ENST00000545297 BAZ1BQ9UIG0 1483 aaKnown RBP25.52■■□□□ 1.68
SURF4-207ENST00000545297 UBTFP17480 764 aaKnown RBP25.49■■□□□ 1.67
SURF4-207ENST00000545297 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.48■■□□□ 1.67
SURF4-207ENST00000545297 PEG3Q9GZU2 1588 aa25.39■■□□□ 1.65
SURF4-207ENST00000545297 CSRNP3Q8WYN3 585 aa25.33■■□□□ 1.65
SURF4-207ENST00000545297 CEP162Q5TB80 1403 aa25.26■■□□□ 1.63
SURF4-207ENST00000545297 CCER1Q8TC90 406 aaPredicted RBP25.22■■□□□ 1.63
SURF4-207ENST00000545297 WRNQ14191 1432 aaPredicted RBP eCLIP25.22■■□□□ 1.63
SURF4-207ENST00000545297 NCAPD3P42695 1498 aa25.13■■□□□ 1.61
SURF4-207ENST00000545297 SYNJ1O43426 1573 aa25.12■■□□□ 1.61
SURF4-207ENST00000545297 ZEB1P37275 1124 aaPredicted RBP25.1■■□□□ 1.61
SURF4-207ENST00000545297 CC2D2AQ9P2K1 1620 aa25.06■■□□□ 1.6
SURF4-207ENST00000545297 TNIKQ9UKE5 1360 aa25.04■■□□□ 1.6
SURF4-207ENST00000545297 HMGXB3Q12766 1538 aa25.01■■□□□ 1.59
SURF4-207ENST00000545297 DNAJC5BQ9UF47 199 aa24.99■■□□□ 1.59
SURF4-207ENST00000545297 HNRNPUL2Q1KMD3 747 aaKnown RBP24.99■■□□□ 1.59
SURF4-207ENST00000545297 GOLGA3Q08378 1498 aa24.93■■□□□ 1.58
SURF4-207ENST00000545297 RAPGEF2Q9Y4G8 1499 aa24.89■■□□□ 1.58
SURF4-207ENST00000545297 EEA1Q15075 1411 aa24.84■■□□□ 1.57
SURF4-207ENST00000545297 CLIP1P30622 1438 aa24.81■■□□□ 1.56
SURF4-207ENST00000545297 CEP164Q9UPV0 1460 aa24.76■■□□□ 1.55
SURF4-207ENST00000545297 CFTRP13569 1480 aa24.75■■□□□ 1.55
SURF4-207ENST00000545297 NESP48681 1621 aa24.72■■□□□ 1.55
SURF4-207ENST00000545297 APLP2Q06481 763 aa24.7■■□□□ 1.54
SURF4-207ENST00000545297 CADPSQ9ULU8 1353 aa24.7■■□□□ 1.54
SURF4-207ENST00000545297 CUX1P39880 1505 aa24.68■■□□□ 1.54
SURF4-207ENST00000545297 TOP2BQ02880 1626 aa24.63■■□□□ 1.53
SURF4-207ENST00000545297 KIF21BO75037 1637 aa24.58■■□□□ 1.53
SURF4-207ENST00000545297 KANK4Q5T7N3 995 aaPredicted RBP24.58■■□□□ 1.53
SURF4-207ENST00000545297 VPS8Q8N3P4 1428 aa24.55■■□□□ 1.52
SURF4-207ENST00000545297 DIEXFQ68CQ4 756 aaKnown RBP24.54■■□□□ 1.52
SURF4-207ENST00000545297 ITGAEP38570 1179 aa24.54■■□□□ 1.52
SURF4-207ENST00000545297 BIVM-ERCC5R4GMW8 1640 aa24.5■■□□□ 1.51
SURF4-207ENST00000545297 FANCD2Q9BXW9 1451 aa24.5■■□□□ 1.51
SURF4-207ENST00000545297 SCAF1Q9H7N4 1312 aaKnown RBP24.5■■□□□ 1.51
SURF4-207ENST00000545297 P3H3Q8IVL6 736 aa24.48■■□□□ 1.51
SURF4-207ENST00000545297 ATP1B4Q9UN42 357 aaPredicted RBP24.41■■□□□ 1.5
SURF4-207ENST00000545297 PRXQ9BXM0 1461 aa24.39■■□□□ 1.5
SURF4-207ENST00000545297 FGD5Q6ZNL6 1462 aa24.39■■□□□ 1.49
SURF4-207ENST00000545297 ARAP1Q96P48 1450 aa24.39■■□□□ 1.49
SURF4-207ENST00000545297 KIF27Q86VH2 1401 aa24.38■■□□□ 1.49
SURF4-207ENST00000545297 CUX2O14529 1486 aa24.38■■□□□ 1.49
SURF4-207ENST00000545297 YTHDC1Q96MU7 727 aaKnown RBP24.38■■□□□ 1.49
SURF4-207ENST00000545297 PRDM2Q13029 1718 aa24.37■■□□□ 1.49
SURF4-207ENST00000545297 NEUROD1Q13562 356 aa24.34■■□□□ 1.49
SURF4-207ENST00000545297 RAD54L2Q9Y4B4 1467 aa24.34■■□□□ 1.49
SURF4-207ENST00000545297 ZNF316A6NFI3 1004 aaPredicted RBP24.27■■□□□ 1.48
SURF4-207ENST00000545297 IGF1RP08069 1367 aa24.25■■□□□ 1.47
SURF4-207ENST00000545297 TOPBP1Q92547 1522 aa24.22■■□□□ 1.47
SURF4-207ENST00000545297 ARHGAP35Q9NRY4 1499 aa24.2■■□□□ 1.46
SURF4-207ENST00000545297 URB2Q14146 1524 aaKnown RBP24.19■■□□□ 1.46
SURF4-207ENST00000545297 POLA1P09884 1462 aaPredicted RBP24.18■■□□□ 1.46
SURF4-207ENST00000545297 ERICH3Q5RHP9 1530 aa24.18■■□□□ 1.46
SURF4-207ENST00000545297 LAMC3Q9Y6N6 1575 aa24.16■■□□□ 1.46
SURF4-207ENST00000545297 CARMIL1Q5VZK9 1371 aa24.16■■□□□ 1.46
SURF4-207ENST00000545297 MIER1Q8N108 512 aa24.16■■□□□ 1.46
SURF4-207ENST00000545297 TDRD9Q8NDG6 1382 aaKnown RBP24.15■■□□□ 1.46
SURF4-207ENST00000545297 KIF21AQ7Z4S6 1674 aa24.14■■□□□ 1.45
SURF4-207ENST00000545297 DNMBPQ6XZF7 1577 aa24.14■■□□□ 1.45
SURF4-207ENST00000545297 PDS5BQ9NTI5 1447 aa24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms