RNA: ENST00000545297.5

SURF4-207, Transcript of surfeit 4, humanhuman

TSL 2 BASIC

Gene SURF4, Length 2,863 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SURF4-207ENST00000545297 UPF1Q92900 1129 aaKnown RBP eCLIP17.49■□□□□ 0.398e-33■■■■■ 140.1
SURF4-207ENST00000545297 SF3B1O75533 1304 aaKnown RBP eCLIP16.43■□□□□ 0.229e-6■■■■■ 68.9
SURF4-207ENST00000545297 GRSF1Q12849 480 aaKnown RBP eCLIP15.54■□□□□ 0.088e-30■■■■■ 61.1
SURF4-207ENST00000545297 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.05■□□□□ 0.488e-7■■■■■ 50.2
SURF4-207ENST00000545297 HNRNPCP07910 306 aaKnown RBP eCLIP15.61■□□□□ 0.092e-12■■■■■ 42.7
SURF4-207ENST00000545297 AKAP1Q92667 903 aaKnown RBP eCLIP14.75□□□□□ -0.051e-15■■■■■ 42.2
SURF4-207ENST00000545297 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.01□□□□□ -0.331e-7■■■■■ 39
SURF4-207ENST00000545297 WDR43Q15061 677 aaKnown RBP eCLIP21.63■■□□□ 1.053e-6■■■■■ 38.4
SURF4-207ENST00000545297 RBFOX2O43251 390 aaKnown RBP eCLIP13.3□□□□□ -0.282e-20■■■■■ 35.3
SURF4-207ENST00000545297 RBM22Q9NW64 420 aaKnown RBP eCLIP16.54■□□□□ 0.241e-6■■■■■ 34.5
SURF4-207ENST00000545297 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.31■■□□□ 1.163e-11■■■■■ 31.5
SURF4-207ENST00000545297 NKRFO15226 690 aaKnown RBP eCLIP18.48■□□□□ 0.551e-8■■■■■ 28.8
SURF4-207ENST00000545297 AQRO60306 1485 aaKnown RBP eCLIP23.87■■□□□ 1.418e-7■■■■□ 26.7
SURF4-207ENST00000545297 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.16■□□□□ 0.182e-10■■■■□ 26.3
SURF4-207ENST00000545297 RPS3P23396 243 aaKnown RBP eCLIP15.81■□□□□ 0.125e-10■■■■□ 26.2
SURF4-207ENST00000545297 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.21■□□□□ 0.195e-10■■■■□ 24.7
SURF4-207ENST00000545297 XRCC6P12956 609 aaKnown RBP eCLIP20.08■□□□□ 0.82e-9■■■■□ 24.1
SURF4-207ENST00000545297 EFTUD2Q15029 972 aaKnown RBP eCLIP17.22■□□□□ 0.356e-8■■■■□ 22.4
SURF4-207ENST00000545297 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.11■□□□□ 0.332e-10■■■■□ 22.3
SURF4-207ENST00000545297 TIAL1Q01085 375 aaKnown RBP eCLIP16.31■□□□□ 0.29e-7■■■■□ 22
SURF4-207ENST00000545297 RBM5P52756 815 aaKnown RBP eCLIP18.28■□□□□ 0.524e-6■■■■□ 21.7
SURF4-207ENST00000545297 DDX3XO00571 662 aaKnown RBP eCLIP17.77■□□□□ 0.444e-15■■■■□ 20.3
SURF4-207ENST00000545297 EIF3GO75821 320 aaKnown RBP eCLIP13.99□□□□□ -0.171e-7■■■■□ 19.4
SURF4-207ENST00000545297 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.53■□□□□ 0.247e-7■■■□□ 19
SURF4-207ENST00000545297 U2AF2P26368 475 aaKnown RBP eCLIP18.73■□□□□ 0.592e-10■■■□□ 18.3
SURF4-207ENST00000545297 AATFQ9NY61 560 aaKnown RBP eCLIP18.82■□□□□ 0.62e-7■■■□□ 18.2
SURF4-207ENST00000545297 SND1Q7KZF4 910 aaKnown RBP eCLIP17.89■□□□□ 0.452e-10■■■□□ 17.2
SURF4-207ENST00000545297 TIA1P31483 386 aaKnown RBP eCLIP15.6■□□□□ 0.091e-8■■■□□ 16.7
SURF4-207ENST00000545297 NONOQ15233 471 aaKnown RBP eCLIP18.28■□□□□ 0.524e-7■■■□□ 16.5
SURF4-207ENST00000545297 SF3B4Q15427 424 aaKnown RBP eCLIP15.15■□□□□ 0.026e-7■■■□□ 16.2
SURF4-207ENST00000545297 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.05■■□□□ 1.281e-7■■■□□ 16
SURF4-207ENST00000545297 HNRNPMP52272 730 aaKnown RBP eCLIP22.76■■□□□ 1.232e-9■■■□□ 15.9
SURF4-207ENST00000545297 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.32■□□□□ 0.23e-10■■■□□ 15.4
SURF4-207ENST00000545297 PCBP2Q15366 365 aaKnown RBP eCLIP15.9■□□□□ 0.142e-83■■□□□ 14.5
SURF4-207ENST00000545297 IGF2BP3O00425 579 aaKnown RBP eCLIP17.03■□□□□ 0.329e-7■■□□□ 13.8
SURF4-207ENST00000545297 U2AF1Q01081 240 aaKnown RBP eCLIP21.24■□□□□ 0.994e-13■■□□□ 13.5
SURF4-207ENST00000545297 PABPC4Q13310 644 aaKnown RBP eCLIP18.1■□□□□ 0.493e-8■■□□□ 13.2
SURF4-207ENST00000545297 GPKOWQ92917 476 aaPredicted RBP eCLIP18.69■□□□□ 0.585e-7■■□□□ 13
SURF4-207ENST00000545297 SF3A3Q12874 501 aaKnown RBP eCLIP17.74■□□□□ 0.431e-13■■□□□ 12.8
SURF4-207ENST00000545297 YBX3P16989 372 aaKnown RBP eCLIP17.36■□□□□ 0.376e-7■■□□□ 12.6
SURF4-207ENST00000545297 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.52■□□□□ 0.073e-16■■□□□ 12
SURF4-207ENST00000545297 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.3■□□□□ 0.681e-6■■□□□ 11.8
SURF4-207ENST00000545297 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.26■□□□□ 0.358e-6■■□□□ 11.7
SURF4-207ENST00000545297 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.6■□□□□ 0.411e-7■□□□□ 10.6
SURF4-207ENST00000545297 PCBP1Q15365 356 aaKnown RBP eCLIP16.46■□□□□ 0.233e-6■□□□□ 10.5
SURF4-207ENST00000545297 FTOQ9C0B1 505 aaKnown RBP eCLIP19.42■□□□□ 0.74e-6■□□□□ 9.9
SURF4-207ENST00000545297 LARP4Q71RC2 724 aaKnown RBP eCLIP16.2■□□□□ 0.184e-9■□□□□ 9.6
SURF4-207ENST00000545297 ZRANB2O95218 330 aaKnown RBP eCLIP18.16■□□□□ 0.52e-8■□□□□ 8.9
SURF4-207ENST00000545297 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.95■□□□□ 0.463e-6■□□□□ 8.8
SURF4-207ENST00000545297 HNRNPKP61978 463 aaKnown RBP eCLIP14.68□□□□□ -0.067e-6■□□□□ 8.5
SURF4-207ENST00000545297 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.1■□□□□ 0.332e-8■□□□□ 8.3
SURF4-207ENST00000545297 G3BP1Q13283 466 aaKnown RBP eCLIP19.67■□□□□ 0.742e-7■□□□□ 8.3
Retrieved 52 of 52 RNA–protein pairs in 11.4 ms