RNA–Protein interactions for RNA: ENST00000545140.1

NUP107-213, Transcript of nucleoporin 107, humanhuman

TSL 2

Gene NUP107, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP107-213ENST00000545140 AEBP2Q6ZN18 517 aaPredicted RBP17.67■□□□□ 0.42
NUP107-213ENST00000545140 CHIC1Q5VXU3 224 aa17.15■□□□□ 0.34
NUP107-213ENST00000545140 SENP3Q9H4L4 574 aaPredicted RBP15.26■□□□□ 0.03
NUP107-213ENST00000545140 PHF23Q9BUL5 403 aaPredicted RBP15.16■□□□□ 0.02
NUP107-213ENST00000545140 FOXD1Q16676 465 aa14.17□□□□□ -0.14
NUP107-213ENST00000545140 PLPPR3Q6T4P5 718 aa13.99□□□□□ -0.17
NUP107-213ENST00000545140 POTEDQ86YR6 584 aa13.7□□□□□ -0.22
NUP107-213ENST00000545140 MSH5O43196 834 aa13.51□□□□□ -0.25
NUP107-213ENST00000545140 ADRA2BP18089 450 aa13.34□□□□□ -0.27
NUP107-213ENST00000545140 PPP6R1Q9UPN7 881 aa13.33□□□□□ -0.28
NUP107-213ENST00000545140 PIAS4Q8N2W9 510 aaPredicted RBP13.2□□□□□ -0.3
NUP107-213ENST00000545140 KCNA4P22459 653 aa12.41□□□□□ -0.42
NUP107-213ENST00000545140 PPP4R3CPQ6ZMV5 832 aa12.4□□□□□ -0.42
NUP107-213ENST00000545140 NCBP3Q53F19 620 aaKnown RBP12.06□□□□□ -0.48
NUP107-213ENST00000545140 MAPK8IP2Q13387 824 aaPredicted RBP12.05□□□□□ -0.48
NUP107-213ENST00000545140 SCAF1Q9H7N4 1312 aaKnown RBP12.05□□□□□ -0.48
NUP107-213ENST00000545140 DMRT2Q9Y5R5 561 aa12.03□□□□□ -0.48
NUP107-213ENST00000545140 NPM3O75607 178 aaKnown RBP11.97□□□□□ -0.49
NUP107-213ENST00000545140 CNKSR2Q8WXI2 1034 aa11.96□□□□□ -0.49
NUP107-213ENST00000545140 EHMT2Q96KQ7 1210 aa11.82□□□□□ -0.52
NUP107-213ENST00000545140 SLC4A1APQ9BWU0 796 aaKnown RBP11.82□□□□□ -0.52
NUP107-213ENST00000545140 CACNB1Q02641 598 aaPredicted RBP11.73□□□□□ -0.53
NUP107-213ENST00000545140 RNF216Q9NWF9 866 aaPredicted RBP11.66□□□□□ -0.54
NUP107-213ENST00000545140 HOXD11P31277 338 aaPredicted RBP11.56□□□□□ -0.56
NUP107-213ENST00000545140 CSRNP3Q8WYN3 585 aa11.52□□□□□ -0.57
NUP107-213ENST00000545140 DCAF8L1A6NGE4 600 aa11.49□□□□□ -0.57
NUP107-213ENST00000545140 ZBTB22O15209 634 aa11.46□□□□□ -0.57
NUP107-213ENST00000545140 RNF39Q9H2S5 420 aa11.45□□□□□ -0.58
NUP107-213ENST00000545140 DNAJC5BQ9UF47 199 aa11.44□□□□□ -0.58
NUP107-213ENST00000545140 C1QBPQ07021 282 aaKnown RBP11.3□□□□□ -0.6
NUP107-213ENST00000545140 FOXD4L1Q9NU39 408 aa11.3□□□□□ -0.6
NUP107-213ENST00000545140 SLC4A2P04920 1241 aa11.27□□□□□ -0.61
NUP107-213ENST00000545140 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.06□□□□□ -0.641e-6■■■□□ 14.6
NUP107-213ENST00000545140 MYCNP04198 464 aaPredicted RBP11.01□□□□□ -0.65
NUP107-213ENST00000545140 U3KPZ7 1027 aaPredicted RBP10.92□□□□□ -0.66
NUP107-213ENST00000545140 ATXN8OSP0DMR3 200 aa10.81□□□□□ -0.68
NUP107-213ENST00000545140 ATF5Q9Y2D1 282 aaPredicted RBP10.81□□□□□ -0.68
NUP107-213ENST00000545140 SAMD1Q6SPF0 538 aaPredicted RBP10.76□□□□□ -0.69
NUP107-213ENST00000545140 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.75□□□□□ -0.69
NUP107-213ENST00000545140 HNRNPUL2Q1KMD3 747 aaKnown RBP10.75□□□□□ -0.69
NUP107-213ENST00000545140 POTEHQ6S545 545 aa10.68□□□□□ -0.7
NUP107-213ENST00000545140 SPINK5Q9NQ38 1064 aaPredicted RBP10.6□□□□□ -0.71
NUP107-213ENST00000545140 DSG3P32926 999 aa10.57□□□□□ -0.72
NUP107-213ENST00000545140 APLP2Q06481 763 aa10.56□□□□□ -0.72
NUP107-213ENST00000545140 CAPN15O75808 1086 aa10.55□□□□□ -0.72
NUP107-213ENST00000545140 ZNF219Q9P2Y4 722 aaPredicted RBP10.54□□□□□ -0.72
NUP107-213ENST00000545140 TRHP20396 242 aaPredicted RBP10.53□□□□□ -0.72
NUP107-213ENST00000545140 FKBP8Q14318 412 aa10.42□□□□□ -0.74
NUP107-213ENST00000545140 ABCB7O75027 752 aa10.39□□□□□ -0.75
NUP107-213ENST00000545140 POLA2Q14181 598 aa10.38□□□□□ -0.75
NUP107-213ENST00000545140 MKRN4PQ13434 485 aaPredicted RBP10.32□□□□□ -0.76
NUP107-213ENST00000545140 FBLN2P98095 1184 aa10.23□□□□□ -0.77
NUP107-213ENST00000545140 RBM42Q9BTD8 480 aaKnown RBP10.19□□□□□ -0.78
NUP107-213ENST00000545140 SPDYE4A6NLX3 237 aa10.16□□□□□ -0.78
NUP107-213ENST00000545140 ZBTB12Q9Y330 459 aaPredicted RBP10.13□□□□□ -0.79
NUP107-213ENST00000545140 OSCARQ8IYS5 282 aa10.07□□□□□ -0.8
NUP107-213ENST00000545140 CHRDL2Q6WN34 429 aa10.04□□□□□ -0.8
NUP107-213ENST00000545140 PROM2Q8N271 834 aa9.98□□□□□ -0.81
NUP107-213ENST00000545140 ZNF692Q9BU19 519 aaPredicted RBP9.95□□□□□ -0.82
NUP107-213ENST00000545140 SPDYE2BA6NHP3 402 aa9.91□□□□□ -0.82
NUP107-213ENST00000545140 SPDYE6P0CI01 402 aa9.91□□□□□ -0.82
NUP107-213ENST00000545140 SPDYE2Q495Y8 402 aa9.91□□□□□ -0.82
NUP107-213ENST00000545140 RTN4Q9NQC3 1192 aaKnown RBP9.88□□□□□ -0.83
NUP107-213ENST00000545140 SSUH2Q9Y2M2 353 aa9.88□□□□□ -0.83
NUP107-213ENST00000545140 FBXO3Q9UK99 471 aa9.87□□□□□ -0.83
NUP107-213ENST00000545140 SP7Q8TDD2 431 aaPredicted RBP9.86□□□□□ -0.83
NUP107-213ENST00000545140 PABPN1Q86U42 306 aaKnown RBP eCLIP9.85□□□□□ -0.83
NUP107-213ENST00000545140 AKT1S1Q96B36 256 aa9.84□□□□□ -0.83
NUP107-213ENST00000545140 VASPP50552 380 aaPredicted RBP9.81□□□□□ -0.84
NUP107-213ENST00000545140 AMER1Q5JTC6 1135 aaPredicted RBP9.8□□□□□ -0.84
NUP107-213ENST00000545140 IFNLR1Q8IU57 520 aaPredicted RBP9.72□□□□□ -0.85
NUP107-213ENST00000545140 PIP4P2Q8N4L2 257 aa9.71□□□□□ -0.86
NUP107-213ENST00000545140 REM2Q8IYK8 340 aaPredicted RBP9.7□□□□□ -0.86
NUP107-213ENST00000545140 STAG3Q9UJ98 1225 aa9.65□□□□□ -0.86
NUP107-213ENST00000545140 PLCD3Q8N3E9 789 aa9.63□□□□□ -0.87
NUP107-213ENST00000545140 HAX1O00165 279 aa9.62□□□□□ -0.87
NUP107-213ENST00000545140 PITPNM1O00562 1244 aa9.61□□□□□ -0.87
NUP107-213ENST00000545140 FXR2P51116 673 aaKnown RBP eCLIP9.61□□□□□ -0.87
NUP107-213ENST00000545140 MIER1Q8N108 512 aa9.61□□□□□ -0.87
NUP107-213ENST00000545140 KLHL34Q8N239 644 aa9.6□□□□□ -0.87
NUP107-213ENST00000545140 CLEC11AQ9Y240 323 aa9.6□□□□□ -0.87
NUP107-213ENST00000545140 SPDYE1Q8NFV5 336 aaPredicted RBP9.57□□□□□ -0.88
NUP107-213ENST00000545140 SPOCK2Q92563 424 aa9.52□□□□□ -0.89
NUP107-213ENST00000545140 PRR29P0C7W0 189 aa9.49□□□□□ -0.89
NUP107-213ENST00000545140 PLEKHG5O94827 1062 aa9.47□□□□□ -0.89
NUP107-213ENST00000545140 PKD2Q13563 968 aa9.47□□□□□ -0.89
NUP107-213ENST00000545140 CREBZFQ9NS37 354 aa9.45□□□□□ -0.9
NUP107-213ENST00000545140 ZBTB47Q9UFB7 747 aaPredicted RBP9.41□□□□□ -0.9
NUP107-213ENST00000545140 EVX2Q03828 476 aa9.4□□□□□ -0.9
NUP107-213ENST00000545140 DCAF8L2P0C7V8 631 aa9.39□□□□□ -0.91
NUP107-213ENST00000545140 CHADLQ6NUI6 762 aa9.38□□□□□ -0.91
NUP107-213ENST00000545140 CIZ1Q9ULV3 898 aaPredicted RBP9.38□□□□□ -0.91
NUP107-213ENST00000545140 MNX1P50219 401 aaPredicted RBP9.37□□□□□ -0.91
NUP107-213ENST00000545140 ECM2O94769 699 aaPredicted RBP9.36□□□□□ -0.91
NUP107-213ENST00000545140 PRKAR2AP13861 404 aaKnown RBP9.35□□□□□ -0.91
NUP107-213ENST00000545140 NUBP1P53384 320 aa9.34□□□□□ -0.91
NUP107-213ENST00000545140 C19orf67A6NJJ6 358 aa9.31□□□□□ -0.92
NUP107-213ENST00000545140 RGL2O15211 777 aa9.3□□□□□ -0.92
NUP107-213ENST00000545140 DCAF8Q5TAQ9 597 aa9.28□□□□□ -0.92
NUP107-213ENST00000545140 RASEFQ8IZ41 740 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms