RNA–Protein interactions for RNA: ENST00000543464.6

CPD-202, Transcript of carboxypeptidase D, humanhuman

TSL 2 BASIC

Gene CPD, Length 4,007 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPD-202ENST00000543464 NISCHQ9Y2I1 1504 aa8.28□□□□□ -1.08
CPD-202ENST00000543464 CCDC180Q9P1Z9 1646 aa7.45□□□□□ -1.22
CPD-202ENST00000543464 ZCCHC6Q5VYS8 1495 aaKnown RBP7.07□□□□□ -1.28
CPD-202ENST00000543464 DCAF1Q9Y4B6 1507 aa7.03□□□□□ -1.28
CPD-202ENST00000543464 UNC13AQ9UPW8 1703 aa6.99□□□□□ -1.29
CPD-202ENST00000543464 MYO15BQ96JP2 1530 aa6.94□□□□□ -1.3
CPD-202ENST00000543464 BICRAQ9NZM4 1560 aa6.71□□□□□ -1.33
CPD-202ENST00000543464 ABCC9O60706 1549 aa6.68□□□□□ -1.34
CPD-202ENST00000543464 EIF4G1Q04637 1599 aaKnown RBP6.68□□□□□ -1.34
CPD-202ENST00000543464 NACADO15069 1562 aa6.66□□□□□ -1.34
CPD-202ENST00000543464 PEG3Q9GZU2 1588 aa6.55□□□□□ -1.36
CPD-202ENST00000543464 SCRIBQ14160 1630 aa6.52□□□□□ -1.37
CPD-202ENST00000543464 RB1CC1Q8TDY2 1594 aa6.51□□□□□ -1.37
CPD-202ENST00000543464 BAZ1AQ9NRL2 1556 aaPredicted RBP6.44□□□□□ -1.38
CPD-202ENST00000543464 SMARCA4P51532 1647 aa6.43□□□□□ -1.38
CPD-202ENST00000543464 SHROOM4Q9ULL8 1493 aa6.43□□□□□ -1.38
CPD-202ENST00000543464 WIZO95785 1651 aa6.43□□□□□ -1.38
CPD-202ENST00000543464 PRDM2Q13029 1718 aa6.42□□□□□ -1.38
CPD-202ENST00000543464 MROH2BQ7Z745 1585 aa6.41□□□□□ -1.38
CPD-202ENST00000543464 CECR2Q9BXF3 1484 aa6.39□□□□□ -1.39
CPD-202ENST00000543464 RSF1Q96T23 1441 aaPredicted RBP6.35□□□□□ -1.39
CPD-202ENST00000543464 SMARCA2P51531 1590 aa6.32□□□□□ -1.4
CPD-202ENST00000543464 TOP2AP11388 1531 aaKnown RBP6.3□□□□□ -1.4
CPD-202ENST00000543464 HMGXB3Q12766 1538 aa6.24□□□□□ -1.41
CPD-202ENST00000543464 WDR97A6NE52 1622 aa6.22□□□□□ -1.41
CPD-202ENST00000543464 BIVM-ERCC5R4GMW8 1640 aa6.21□□□□□ -1.42
CPD-202ENST00000543464 ATAD2BQ9ULI0 1458 aa6.16□□□□□ -1.42
CPD-202ENST00000543464 CC2D2AQ9P2K1 1620 aa6.13□□□□□ -1.43
CPD-202ENST00000543464 CCDC88BA6NC98 1476 aa6.13□□□□□ -1.43
CPD-202ENST00000543464 NCAPD3P42695 1498 aa6.12□□□□□ -1.43
CPD-202ENST00000543464 SYNJ1O43426 1573 aa6.12□□□□□ -1.43
CPD-202ENST00000543464 TOP2BQ02880 1626 aa6.07□□□□□ -1.44
CPD-202ENST00000543464 KIF21AQ7Z4S6 1674 aa6.06□□□□□ -1.44
CPD-202ENST00000543464 ABCC8Q09428 1581 aa6.03□□□□□ -1.44
CPD-202ENST00000543464 LRRIQ1Q96JM4 1722 aa6.03□□□□□ -1.44
CPD-202ENST00000543464 CFTRP13569 1480 aa6.01□□□□□ -1.45
CPD-202ENST00000543464 CUX1P39880 1505 aa6.01□□□□□ -1.45
CPD-202ENST00000543464 THOC2Q8NI27 1593 aaKnown RBP6□□□□□ -1.45
CPD-202ENST00000543464 AEBP2Q6ZN18 517 aaPredicted RBP6□□□□□ -1.45
CPD-202ENST00000543464 TARBP1Q13395 1621 aaKnown RBP6□□□□□ -1.45
CPD-202ENST00000543464 ABCA5Q8WWZ7 1642 aa5.99□□□□□ -1.45
CPD-202ENST00000543464 KIF21BO75037 1637 aa5.96□□□□□ -1.46
CPD-202ENST00000543464 CHIC1Q5VXU3 224 aa5.95□□□□□ -1.46
CPD-202ENST00000543464 LAMC3Q9Y6N6 1575 aa5.94□□□□□ -1.46
CPD-202ENST00000543464 BAZ1BQ9UIG0 1483 aaKnown RBP5.94□□□□□ -1.46
CPD-202ENST00000543464 PBRM1Q86U86 1689 aa5.92□□□□□ -1.46
CPD-202ENST00000543464 RUSC2Q8N2Y8 1516 aa5.91□□□□□ -1.46
CPD-202ENST00000543464 WDR62O43379 1518 aa5.88□□□□□ -1.47
CPD-202ENST00000543464 URB2Q14146 1524 aaKnown RBP5.88□□□□□ -1.47
CPD-202ENST00000543464 DNMBPQ6XZF7 1577 aa5.88□□□□□ -1.47
CPD-202ENST00000543464 CTTNBP2Q8WZ74 1663 aa5.88□□□□□ -1.47
CPD-202ENST00000543464 DNAJC5BQ9UF47 199 aa5.86□□□□□ -1.47
CPD-202ENST00000543464 NESP48681 1621 aa5.86□□□□□ -1.47
CPD-202ENST00000543464 ERICH3Q5RHP9 1530 aa5.84□□□□□ -1.47
CPD-202ENST00000543464 PRXQ9BXM0 1461 aa5.84□□□□□ -1.47
CPD-202ENST00000543464 SAMD9Q5K651 1589 aa5.84□□□□□ -1.47
CPD-202ENST00000543464 PABPN1Q86U42 306 aaKnown RBP eCLIP5.84□□□□□ -1.47
CPD-202ENST00000543464 CUX2O14529 1486 aa5.83□□□□□ -1.48
CPD-202ENST00000543464 SOGA1O94964 1423 aa5.81□□□□□ -1.48
CPD-202ENST00000543464 ABCA10Q8WWZ4 1543 aa5.81□□□□□ -1.48
CPD-202ENST00000543464 TOPBP1Q92547 1522 aa5.81□□□□□ -1.48
CPD-202ENST00000543464 CFAP43Q8NDM7 1665 aa5.8□□□□□ -1.48
CPD-202ENST00000543464 CUL7Q14999 1698 aa5.8□□□□□ -1.48
CPD-202ENST00000543464 SHROOM2Q13796 1616 aa5.79□□□□□ -1.48
CPD-202ENST00000543464 ADAMTS12P58397 1594 aa5.79□□□□□ -1.48
CPD-202ENST00000543464 POLA1P09884 1462 aaPredicted RBP5.78□□□□□ -1.48
CPD-202ENST00000543464 EIF4G3O43432 1585 aaKnown RBP5.77□□□□□ -1.49
CPD-202ENST00000543464 WRNQ14191 1432 aaPredicted RBP eCLIP5.76□□□□□ -1.49
CPD-202ENST00000543464 CADPSQ9ULU8 1353 aa5.76□□□□□ -1.49
CPD-202ENST00000543464 FGD5Q6ZNL6 1462 aa5.75□□□□□ -1.49
CPD-202ENST00000543464 FANCD2Q9BXW9 1451 aa5.74□□□□□ -1.49
CPD-202ENST00000543464 ARAP1Q96P48 1450 aa5.74□□□□□ -1.49
CPD-202ENST00000543464 SUPT5HO00267 1087 aaKnown RBP5.72□□□□□ -1.49
CPD-202ENST00000543464 ARHGEF11O15085 1522 aa5.72□□□□□ -1.49
CPD-202ENST00000543464 DCAF8L2P0C7V8 631 aa5.72□□□□□ -1.49
CPD-202ENST00000543464 RAPGEF2Q9Y4G8 1499 aa5.72□□□□□ -1.49
CPD-202ENST00000543464 CHD1O14646 1710 aa5.71□□□□□ -1.5
CPD-202ENST00000543464 CEP170Q5SW79 1584 aa5.71□□□□□ -1.5
CPD-202ENST00000543464 SNAPC4Q5SXM2 1469 aa5.7□□□□□ -1.5
CPD-202ENST00000543464 EEA1Q15075 1411 aa5.68□□□□□ -1.5
CPD-202ENST00000543464 ADCY10Q96PN6 1610 aa5.68□□□□□ -1.5
CPD-202ENST00000543464 MAGI3Q5TCQ9 1506 aa5.67□□□□□ -1.5
CPD-202ENST00000543464 RAD54L2Q9Y4B4 1467 aa5.67□□□□□ -1.5
CPD-202ENST00000543464 CLASP1Q7Z460 1538 aa5.66□□□□□ -1.5
CPD-202ENST00000543464 MRC2Q9UBG0 1479 aa5.66□□□□□ -1.5
CPD-202ENST00000543464 PCF11O94913 1555 aaKnown RBP5.65□□□□□ -1.5
CPD-202ENST00000543464 ARHGAP35Q9NRY4 1499 aa5.65□□□□□ -1.5
CPD-202ENST00000543464 CEP164Q9UPV0 1460 aa5.65□□□□□ -1.51
CPD-202ENST00000543464 MAP3K1Q13233 1512 aa5.65□□□□□ -1.51
CPD-202ENST00000543464 ZNF608Q9ULD9 1512 aaPredicted RBP5.64□□□□□ -1.51
CPD-202ENST00000543464 CROCC2H7BZ55 1655 aa5.64□□□□□ -1.51
CPD-202ENST00000543464 IGF1RP08069 1367 aa5.64□□□□□ -1.51
CPD-202ENST00000543464 UGGT2Q9NYU1 1516 aa5.63□□□□□ -1.51
CPD-202ENST00000543464 DISP1Q96F81 1524 aa5.63□□□□□ -1.51
CPD-202ENST00000543464 TNIKQ9UKE5 1360 aa5.62□□□□□ -1.51
CPD-202ENST00000543464 KIAA0556O60303 1618 aa5.61□□□□□ -1.51
CPD-202ENST00000543464 GOLGA3Q08378 1498 aa5.61□□□□□ -1.51
CPD-202ENST00000543464 GRIN2BQ13224 1484 aa5.61□□□□□ -1.51
CPD-202ENST00000543464 TIAM1Q13009 1591 aa5.6□□□□□ -1.51
CPD-202ENST00000543464 EFCAB5A4FU69 1503 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms