RNA–Protein interactions for RNA: ENST00000543415.5

GTF2H3-213, Transcript of general transcription factor IIH subunit 3, humanhuman

TSL 5

Gene GTF2H3, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2H3-213ENST00000543415 AEBP2Q6ZN18 517 aaPredicted RBP20.19■□□□□ 0.82
GTF2H3-213ENST00000543415 CHIC1Q5VXU3 224 aa19.31■□□□□ 0.68
GTF2H3-213ENST00000543415 SENP3Q9H4L4 574 aaPredicted RBP17.31■□□□□ 0.36
GTF2H3-213ENST00000543415 PHF23Q9BUL5 403 aaPredicted RBP17.06■□□□□ 0.32
GTF2H3-213ENST00000543415 FOXD1Q16676 465 aa16.06■□□□□ 0.16
GTF2H3-213ENST00000543415 PLPPR3Q6T4P5 718 aa15.5■□□□□ 0.07
GTF2H3-213ENST00000543415 MSH5O43196 834 aa15.07■□□□□ 0
GTF2H3-213ENST00000543415 PIAS4Q8N2W9 510 aaPredicted RBP15.05■□□□□ -0
GTF2H3-213ENST00000543415 PPP6R1Q9UPN7 881 aa15.04■□□□□ -0
GTF2H3-213ENST00000543415 ADRA2BP18089 450 aa15.01□□□□□ -0.01
GTF2H3-213ENST00000543415 POTEDQ86YR6 584 aa14.5□□□□□ -0.09
GTF2H3-213ENST00000543415 SCAF1Q9H7N4 1312 aaKnown RBP13.86□□□□□ -0.19
GTF2H3-213ENST00000543415 MAPK8IP2Q13387 824 aaPredicted RBP13.75□□□□□ -0.21
GTF2H3-213ENST00000543415 DMRT2Q9Y5R5 561 aa13.71□□□□□ -0.21
GTF2H3-213ENST00000543415 PPP4R3CPQ6ZMV5 832 aa13.56□□□□□ -0.24
GTF2H3-213ENST00000543415 CNKSR2Q8WXI2 1034 aa13.33□□□□□ -0.28
GTF2H3-213ENST00000543415 HOXD11P31277 338 aaPredicted RBP13.24□□□□□ -0.29
GTF2H3-213ENST00000543415 RNF216Q9NWF9 866 aaPredicted RBP13.18□□□□□ -0.3
GTF2H3-213ENST00000543415 DCAF8L1A6NGE4 600 aa13.13□□□□□ -0.31
GTF2H3-213ENST00000543415 NCBP3Q53F19 620 aaKnown RBP13.13□□□□□ -0.31
GTF2H3-213ENST00000543415 NPM3O75607 178 aaKnown RBP12.86□□□□□ -0.35
GTF2H3-213ENST00000543415 CACNB1Q02641 598 aaPredicted RBP12.86□□□□□ -0.35
GTF2H3-213ENST00000543415 DNAJC5BQ9UF47 199 aa12.84□□□□□ -0.35
GTF2H3-213ENST00000543415 RNF39Q9H2S5 420 aa12.82□□□□□ -0.36
GTF2H3-213ENST00000543415 C1QBPQ07021 282 aaKnown RBP12.69□□□□□ -0.38
GTF2H3-213ENST00000543415 KCNA4P22459 653 aa12.67□□□□□ -0.38
GTF2H3-213ENST00000543415 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.63□□□□□ -0.39
GTF2H3-213ENST00000543415 U3KPZ7 1027 aaPredicted RBP12.34□□□□□ -0.43
GTF2H3-213ENST00000543415 SLC4A2P04920 1241 aa12.25□□□□□ -0.45
GTF2H3-213ENST00000543415 CAPN15O75808 1086 aa12.13□□□□□ -0.47
GTF2H3-213ENST00000543415 APLP2Q06481 763 aa12.12□□□□□ -0.47
GTF2H3-213ENST00000543415 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.11□□□□□ -0.47
GTF2H3-213ENST00000543415 HNRNPUL2Q1KMD3 747 aaKnown RBP12.11□□□□□ -0.47
GTF2H3-213ENST00000543415 SPINK5Q9NQ38 1064 aaPredicted RBP12.11□□□□□ -0.47
GTF2H3-213ENST00000543415 DSG3P32926 999 aa12.03□□□□□ -0.48
GTF2H3-213ENST00000543415 SAMD1Q6SPF0 538 aaPredicted RBP12.02□□□□□ -0.49
GTF2H3-213ENST00000543415 SLC4A1APQ9BWU0 796 aaKnown RBP12.02□□□□□ -0.49
GTF2H3-213ENST00000543415 ZNF219Q9P2Y4 722 aaPredicted RBP11.98□□□□□ -0.49
GTF2H3-213ENST00000543415 TRHP20396 242 aaPredicted RBP11.95□□□□□ -0.5
GTF2H3-213ENST00000543415 MYCNP04198 464 aaPredicted RBP11.94□□□□□ -0.5
GTF2H3-213ENST00000543415 FOXD4L1Q9NU39 408 aa11.85□□□□□ -0.51
GTF2H3-213ENST00000543415 ABCB7O75027 752 aa11.82□□□□□ -0.52
GTF2H3-213ENST00000543415 POLA2Q14181 598 aa11.65□□□□□ -0.54
GTF2H3-213ENST00000543415 ZBTB22O15209 634 aa11.61□□□□□ -0.55
GTF2H3-213ENST00000543415 ATF5Q9Y2D1 282 aaPredicted RBP11.57□□□□□ -0.56
GTF2H3-213ENST00000543415 RBM42Q9BTD8 480 aaKnown RBP11.55□□□□□ -0.56
GTF2H3-213ENST00000543415 ATXN8OSP0DMR3 200 aa11.52□□□□□ -0.57
GTF2H3-213ENST00000543415 ZBTB12Q9Y330 459 aaPredicted RBP11.49□□□□□ -0.57
GTF2H3-213ENST00000543415 POTEHQ6S545 545 aa11.4□□□□□ -0.58
GTF2H3-213ENST00000543415 EHMT2Q96KQ7 1210 aa11.31□□□□□ -0.6
GTF2H3-213ENST00000543415 AKT1S1Q96B36 256 aa11.28□□□□□ -0.6
GTF2H3-213ENST00000543415 CSRNP3Q8WYN3 585 aa11.27□□□□□ -0.61
GTF2H3-213ENST00000543415 OSCARQ8IYS5 282 aa11.25□□□□□ -0.61
GTF2H3-213ENST00000543415 FBLN2P98095 1184 aa11.23□□□□□ -0.61
GTF2H3-213ENST00000543415 CHRDL2Q6WN34 429 aa11.21□□□□□ -0.61
GTF2H3-213ENST00000543415 REM2Q8IYK8 340 aaPredicted RBP11.13□□□□□ -0.63
GTF2H3-213ENST00000543415 SPDYE2BA6NHP3 402 aa11.12□□□□□ -0.63
GTF2H3-213ENST00000543415 SPDYE6P0CI01 402 aa11.12□□□□□ -0.63
GTF2H3-213ENST00000543415 SPDYE2Q495Y8 402 aa11.12□□□□□ -0.63
GTF2H3-213ENST00000543415 MKRN4PQ13434 485 aaPredicted RBP11.06□□□□□ -0.64
GTF2H3-213ENST00000543415 PITPNM1O00562 1244 aa11□□□□□ -0.65
GTF2H3-213ENST00000543415 ZNF692Q9BU19 519 aaPredicted RBP10.98□□□□□ -0.65
GTF2H3-213ENST00000543415 PIP4P2Q8N4L2 257 aa10.94□□□□□ -0.66
GTF2H3-213ENST00000543415 SSUH2Q9Y2M2 353 aa10.94□□□□□ -0.66
GTF2H3-213ENST00000543415 FXR2P51116 673 aaKnown RBP eCLIP10.91□□□□□ -0.66
GTF2H3-213ENST00000543415 SPDYE1Q8NFV5 336 aaPredicted RBP10.91□□□□□ -0.66
GTF2H3-213ENST00000543415 CLEC11AQ9Y240 323 aa10.84□□□□□ -0.67
GTF2H3-213ENST00000543415 PABPN1Q86U42 306 aaKnown RBP eCLIP10.8□□□□□ -0.68
GTF2H3-213ENST00000543415 HAX1O00165 279 aa10.75□□□□□ -0.69
GTF2H3-213ENST00000543415 PRKAR2AP13861 404 aaKnown RBP10.73□□□□□ -0.69
GTF2H3-213ENST00000543415 SP7Q8TDD2 431 aaPredicted RBP10.73□□□□□ -0.69
GTF2H3-213ENST00000543415 PRR29P0C7W0 189 aa10.7□□□□□ -0.7
GTF2H3-213ENST00000543415 SPDYE4A6NLX3 237 aa10.63□□□□□ -0.71
GTF2H3-213ENST00000543415 STAG3Q9UJ98 1225 aa10.59□□□□□ -0.71
GTF2H3-213ENST00000543415 CHADLQ6NUI6 762 aa10.58□□□□□ -0.72
GTF2H3-213ENST00000543415 C19orf67A6NJJ6 358 aa10.55□□□□□ -0.72
GTF2H3-213ENST00000543415 EVX2Q03828 476 aa10.54□□□□□ -0.72
GTF2H3-213ENST00000543415 FARP1Q9Y4F1 1045 aaPredicted RBP10.49□□□□□ -0.73
GTF2H3-213ENST00000543415 CREBZFQ9NS37 354 aa10.41□□□□□ -0.74
GTF2H3-213ENST00000543415 CD44P16070 742 aaKnown RBP10.4□□□□□ -0.74
GTF2H3-213ENST00000543415 PROM2Q8N271 834 aa10.38□□□□□ -0.75
GTF2H3-213ENST00000543415 GABBR2O75899 941 aa10.37□□□□□ -0.75
GTF2H3-213ENST00000543415 CLCN6P51797 869 aa10.35□□□□□ -0.75
GTF2H3-213ENST00000543415 NPM1P06748 294 aaKnown RBP eCLIP10.3□□□□□ -0.76
GTF2H3-213ENST00000543415 PAK3O75914 559 aaPredicted RBP10.26□□□□□ -0.77
GTF2H3-213ENST00000543415 ZRANB1Q9UGI0 708 aa10.26□□□□□ -0.77
GTF2H3-213ENST00000543415 ZNF579Q8NAF0 562 aaKnown RBP10.25□□□□□ -0.77
GTF2H3-213ENST00000543415 MNX1P50219 401 aaPredicted RBP10.23□□□□□ -0.77
GTF2H3-213ENST00000543415 PLEKHG5O94827 1062 aa10.2□□□□□ -0.78
GTF2H3-213ENST00000543415 FKBP8Q14318 412 aa10.17□□□□□ -0.78
GTF2H3-213ENST00000543415 DCBLD2Q96PD2 775 aa10.15□□□□□ -0.78
GTF2H3-213ENST00000543415 MIER1Q8N108 512 aa10.14□□□□□ -0.79
GTF2H3-213ENST00000543415 POTEIP0CG38 1075 aa10.1□□□□□ -0.79
GTF2H3-213ENST00000543415 PHF12Q96QT6 1004 aa10.09□□□□□ -0.79
GTF2H3-213ENST00000543415 GALR2O43603 387 aaPredicted RBP10.08□□□□□ -0.8
GTF2H3-213ENST00000543415 PLCD3Q8N3E9 789 aa10.08□□□□□ -0.8
GTF2H3-213ENST00000543415 LHX8Q68G74 356 aa10.07□□□□□ -0.8
GTF2H3-213ENST00000543415 ZBTB47Q9UFB7 747 aaPredicted RBP10.06□□□□□ -0.8
GTF2H3-213ENST00000543415 TSPYL2Q9H2G4 693 aaPredicted RBP10.05□□□□□ -0.8
GTF2H3-213ENST00000543415 FBXO3Q9UK99 471 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms