RNA–Protein interactions for RNA: ENST00000543054.5

TSG101-207, Transcript of tumor susceptibility 101, humanhuman

TSL 2

Gene TSG101, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSG101-207ENST00000543054 AEBP2Q6ZN18 517 aaPredicted RBP21.83■■□□□ 1.09
TSG101-207ENST00000543054 CHIC1Q5VXU3 224 aa20.71■□□□□ 0.91
TSG101-207ENST00000543054 SENP3Q9H4L4 574 aaPredicted RBP18.66■□□□□ 0.58
TSG101-207ENST00000543054 PHF23Q9BUL5 403 aaPredicted RBP18.38■□□□□ 0.53
TSG101-207ENST00000543054 FOXD1Q16676 465 aa17.37■□□□□ 0.37
TSG101-207ENST00000543054 PLPPR3Q6T4P5 718 aa16.52■□□□□ 0.24
TSG101-207ENST00000543054 MSH5O43196 834 aa16.31■□□□□ 0.2
TSG101-207ENST00000543054 PIAS4Q8N2W9 510 aaPredicted RBP16.21■□□□□ 0.19
TSG101-207ENST00000543054 PPP6R1Q9UPN7 881 aa16.18■□□□□ 0.18
TSG101-207ENST00000543054 ADRA2BP18089 450 aa16.12■□□□□ 0.17
TSG101-207ENST00000543054 POTEDQ86YR6 584 aa15.96■□□□□ 0.15
TSG101-207ENST00000543054 MAPK8IP2Q13387 824 aaPredicted RBP14.81□□□□□ -0.04
TSG101-207ENST00000543054 SCAF1Q9H7N4 1312 aaKnown RBP14.79□□□□□ -0.04
TSG101-207ENST00000543054 DMRT2Q9Y5R5 561 aa14.79□□□□□ -0.04
TSG101-207ENST00000543054 PPP4R3CPQ6ZMV5 832 aa14.45□□□□□ -0.1
TSG101-207ENST00000543054 HOXD11P31277 338 aaPredicted RBP14.24□□□□□ -0.13
TSG101-207ENST00000543054 CNKSR2Q8WXI2 1034 aa14.21□□□□□ -0.13
TSG101-207ENST00000543054 DCAF8L1A6NGE4 600 aa14.11□□□□□ -0.15
TSG101-207ENST00000543054 RNF216Q9NWF9 866 aaPredicted RBP14.11□□□□□ -0.15
TSG101-207ENST00000543054 CACNB1Q02641 598 aaPredicted RBP13.98□□□□□ -0.17
TSG101-207ENST00000543054 NCBP3Q53F19 620 aaKnown RBP13.91□□□□□ -0.18
TSG101-207ENST00000543054 RNF39Q9H2S5 420 aa13.91□□□□□ -0.18
TSG101-207ENST00000543054 KCNA4P22459 653 aa13.86□□□□□ -0.19
TSG101-207ENST00000543054 DNAJC5BQ9UF47 199 aa13.81□□□□□ -0.2
TSG101-207ENST00000543054 C1QBPQ07021 282 aaKnown RBP13.71□□□□□ -0.21
TSG101-207ENST00000543054 NPM3O75607 178 aaKnown RBP13.69□□□□□ -0.22
TSG101-207ENST00000543054 EHMT2Q96KQ7 1210 aa13.61□□□□□ -0.23
TSG101-207ENST00000543054 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.52□□□□□ -0.25
TSG101-207ENST00000543054 U3KPZ7 1027 aaPredicted RBP13.25□□□□□ -0.29
TSG101-207ENST00000543054 SLC4A1APQ9BWU0 796 aaKnown RBP13.24□□□□□ -0.29
TSG101-207ENST00000543054 CSRNP3Q8WYN3 585 aa13.2□□□□□ -0.3
TSG101-207ENST00000543054 SLC4A2P04920 1241 aa13.09□□□□□ -0.31
TSG101-207ENST00000543054 SPINK5Q9NQ38 1064 aaPredicted RBP13.05□□□□□ -0.32
TSG101-207ENST00000543054 CAPN15O75808 1086 aa13.02□□□□□ -0.33
TSG101-207ENST00000543054 DSG3P32926 999 aa12.99□□□□□ -0.33
TSG101-207ENST00000543054 APLP2Q06481 763 aa12.91□□□□□ -0.34
TSG101-207ENST00000543054 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.88□□□□□ -0.35
TSG101-207ENST00000543054 HNRNPUL2Q1KMD3 747 aaKnown RBP12.88□□□□□ -0.35
TSG101-207ENST00000543054 ZBTB22O15209 634 aa12.84□□□□□ -0.35
TSG101-207ENST00000543054 ZNF219Q9P2Y4 722 aaPredicted RBP12.83□□□□□ -0.36
TSG101-207ENST00000543054 SAMD1Q6SPF0 538 aaPredicted RBP12.8□□□□□ -0.36
TSG101-207ENST00000543054 TRHP20396 242 aaPredicted RBP12.79□□□□□ -0.36
TSG101-207ENST00000543054 ABCB7O75027 752 aa12.7□□□□□ -0.38
TSG101-207ENST00000543054 MYCNP04198 464 aaPredicted RBP12.68□□□□□ -0.38
TSG101-207ENST00000543054 FOXD4L1Q9NU39 408 aa12.52□□□□□ -0.41
TSG101-207ENST00000543054 POTEHQ6S545 545 aa12.5□□□□□ -0.41
TSG101-207ENST00000543054 POLA2Q14181 598 aa12.45□□□□□ -0.42
TSG101-207ENST00000543054 RBM42Q9BTD8 480 aaKnown RBP12.43□□□□□ -0.42
TSG101-207ENST00000543054 ATF5Q9Y2D1 282 aaPredicted RBP12.35□□□□□ -0.43
TSG101-207ENST00000543054 ZBTB12Q9Y330 459 aaPredicted RBP12.26□□□□□ -0.45
TSG101-207ENST00000543054 ATXN8OSP0DMR3 200 aa12.17□□□□□ -0.46
TSG101-207ENST00000543054 CHRDL2Q6WN34 429 aa12.15□□□□□ -0.46
TSG101-207ENST00000543054 AKT1S1Q96B36 256 aa12.12□□□□□ -0.47
TSG101-207ENST00000543054 OSCARQ8IYS5 282 aa12.07□□□□□ -0.48
TSG101-207ENST00000543054 REM2Q8IYK8 340 aaPredicted RBP11.99□□□□□ -0.49
TSG101-207ENST00000543054 RTN4Q9NQC3 1192 aaKnown RBP11.93□□□□□ -0.5
TSG101-207ENST00000543054 FBLN2P98095 1184 aa11.91□□□□□ -0.5
TSG101-207ENST00000543054 SPDYE2BA6NHP3 402 aa11.86□□□□□ -0.51
TSG101-207ENST00000543054 SPDYE6P0CI01 402 aa11.86□□□□□ -0.51
TSG101-207ENST00000543054 SPDYE2Q495Y8 402 aa11.86□□□□□ -0.51
TSG101-207ENST00000543054 PITPNM1O00562 1244 aa11.85□□□□□ -0.51
TSG101-207ENST00000543054 FKBP8Q14318 412 aa11.84□□□□□ -0.51
TSG101-207ENST00000543054 PIP4P2Q8N4L2 257 aa11.84□□□□□ -0.51
TSG101-207ENST00000543054 AMER1Q5JTC6 1135 aaPredicted RBP11.82□□□□□ -0.52
TSG101-207ENST00000543054 MKRN4PQ13434 485 aaPredicted RBP11.8□□□□□ -0.52
TSG101-207ENST00000543054 FXR2P51116 673 aaKnown RBP eCLIP11.78□□□□□ -0.52
TSG101-207ENST00000543054 SLC24A1O60721 1099 aa11.72□□□□□ -0.53
TSG101-207ENST00000543054 SSUH2Q9Y2M2 353 aa11.71□□□□□ -0.53
TSG101-207ENST00000543054 SP7Q8TDD2 431 aaPredicted RBP11.7□□□□□ -0.54
TSG101-207ENST00000543054 SPDYE1Q8NFV5 336 aaPredicted RBP11.66□□□□□ -0.54
TSG101-207ENST00000543054 ZNF692Q9BU19 519 aaPredicted RBP11.66□□□□□ -0.54
TSG101-207ENST00000543054 HAX1O00165 279 aa11.61□□□□□ -0.55
TSG101-207ENST00000543054 CLEC11AQ9Y240 323 aa11.57□□□□□ -0.56
TSG101-207ENST00000543054 PRKAR2AP13861 404 aaKnown RBP11.53□□□□□ -0.56
TSG101-207ENST00000543054 PABPN1Q86U42 306 aaKnown RBP eCLIP11.5□□□□□ -0.57
TSG101-207ENST00000543054 EVX2Q03828 476 aa11.46□□□□□ -0.57
TSG101-207ENST00000543054 C19orf67A6NJJ6 358 aa11.41□□□□□ -0.58
TSG101-207ENST00000543054 PRR29P0C7W0 189 aa11.41□□□□□ -0.58
TSG101-207ENST00000543054 CHADLQ6NUI6 762 aa11.36□□□□□ -0.59
TSG101-207ENST00000543054 FARP1Q9Y4F1 1045 aaPredicted RBP11.24□□□□□ -0.61
TSG101-207ENST00000543054 SPDYE4A6NLX3 237 aa11.22□□□□□ -0.61
TSG101-207ENST00000543054 GABBR2O75899 941 aa11.22□□□□□ -0.61
TSG101-207ENST00000543054 PROM2Q8N271 834 aa11.21□□□□□ -0.61
TSG101-207ENST00000543054 STAG3Q9UJ98 1225 aa11.2□□□□□ -0.62
TSG101-207ENST00000543054 CD44P16070 742 aaKnown RBP11.17□□□□□ -0.62
TSG101-207ENST00000543054 CREBZFQ9NS37 354 aa11.13□□□□□ -0.63
TSG101-207ENST00000543054 FBXO3Q9UK99 471 aa11.13□□□□□ -0.63
TSG101-207ENST00000543054 CLCN6P51797 869 aa11.1□□□□□ -0.63
TSG101-207ENST00000543054 VASPP50552 380 aaPredicted RBP11.08□□□□□ -0.64
TSG101-207ENST00000543054 ZNF579Q8NAF0 562 aaKnown RBP11.04□□□□□ -0.64
TSG101-207ENST00000543054 IFNLR1Q8IU57 520 aaPredicted RBP11.01□□□□□ -0.65
TSG101-207ENST00000543054 ZRANB1Q9UGI0 708 aa10.99□□□□□ -0.65
TSG101-207ENST00000543054 POTEIP0CG38 1075 aa10.98□□□□□ -0.65
TSG101-207ENST00000543054 LHX8Q68G74 356 aa10.96□□□□□ -0.65
TSG101-207ENST00000543054 MNX1P50219 401 aaPredicted RBP10.95□□□□□ -0.66
TSG101-207ENST00000543054 PLCB2Q00722 1185 aa10.94□□□□□ -0.66
TSG101-207ENST00000543054 NPM1P06748 294 aaKnown RBP eCLIP10.93□□□□□ -0.66
TSG101-207ENST00000543054 PAK3O75914 559 aaPredicted RBP10.91□□□□□ -0.66
TSG101-207ENST00000543054 PKD2Q13563 968 aa10.9□□□□□ -0.66
TSG101-207ENST00000543054 DCBLD2Q96PD2 775 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 265 ms