RNA–Protein interactions for RNA: ENST00000542810.1

ACSL3-211, Transcript of acyl-CoA synthetase long chain family member 3, humanhuman

TSL 2

Gene ACSL3, Length 428 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACSL3-211ENST00000542810 AEBP2Q6ZN18 517 aaPredicted RBP29.46■■■□□ 2.31
ACSL3-211ENST00000542810 CHIC1Q5VXU3 224 aa28.77■■■□□ 2.2
ACSL3-211ENST00000542810 PHF23Q9BUL5 403 aaPredicted RBP25.35■■□□□ 1.65
ACSL3-211ENST00000542810 SENP3Q9H4L4 574 aaPredicted RBP24.91■■□□□ 1.58
ACSL3-211ENST00000542810 PLPPR3Q6T4P5 718 aa23.35■■□□□ 1.33
ACSL3-211ENST00000542810 FOXD1Q16676 465 aa23.16■■□□□ 1.3
ACSL3-211ENST00000542810 PPP6R1Q9UPN7 881 aa22.36■■□□□ 1.17
ACSL3-211ENST00000542810 ADRA2BP18089 450 aa22.32■■□□□ 1.16
ACSL3-211ENST00000542810 PIAS4Q8N2W9 510 aaPredicted RBP21.81■■□□□ 1.08
ACSL3-211ENST00000542810 MSH5O43196 834 aa21.28■■□□□ 1
ACSL3-211ENST00000542810 PPP4R3CPQ6ZMV5 832 aa20.61■□□□□ 0.89
ACSL3-211ENST00000542810 SCAF1Q9H7N4 1312 aaKnown RBP20.32■□□□□ 0.84
ACSL3-211ENST00000542810 MAPK8IP2Q13387 824 aaPredicted RBP20.24■□□□□ 0.83
ACSL3-211ENST00000542810 KCNA4P22459 653 aa20.21■□□□□ 0.83
ACSL3-211ENST00000542810 NCBP3Q53F19 620 aaKnown RBP20.03■□□□□ 0.8
ACSL3-211ENST00000542810 CNKSR2Q8WXI2 1034 aa20■□□□□ 0.79
ACSL3-211ENST00000542810 DMRT2Q9Y5R5 561 aa19.92■□□□□ 0.78
ACSL3-211ENST00000542810 NPM3O75607 178 aaKnown RBP19.8■□□□□ 0.76
ACSL3-211ENST00000542810 RNF216Q9NWF9 866 aaPredicted RBP19.6■□□□□ 0.73
ACSL3-211ENST00000542810 HOXD11P31277 338 aaPredicted RBP19.53■□□□□ 0.72
ACSL3-211ENST00000542810 POTEDQ86YR6 584 aa19.34■□□□□ 0.69
ACSL3-211ENST00000542810 DNAJC5BQ9UF47 199 aa19.23■□□□□ 0.67
ACSL3-211ENST00000542810 SLC4A1APQ9BWU0 796 aaKnown RBP19.22■□□□□ 0.67
ACSL3-211ENST00000542810 DCAF8L1A6NGE4 600 aa19■□□□□ 0.63
ACSL3-211ENST00000542810 EHMT2Q96KQ7 1210 aa18.73■□□□□ 0.59
ACSL3-211ENST00000542810 SLC4A2P04920 1241 aa18.71■□□□□ 0.59
ACSL3-211ENST00000542810 ZBTB22O15209 634 aa18.63■□□□□ 0.57
ACSL3-211ENST00000542810 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.56■□□□□ 0.56
ACSL3-211ENST00000542810 FOXD4L1Q9NU39 408 aa18.55■□□□□ 0.56
ACSL3-211ENST00000542810 CSRNP3Q8WYN3 585 aa18.54■□□□□ 0.56
ACSL3-211ENST00000542810 U3KPZ7 1027 aaPredicted RBP18.33■□□□□ 0.52
ACSL3-211ENST00000542810 RNF39Q9H2S5 420 aa18.28■□□□□ 0.52
ACSL3-211ENST00000542810 MYCNP04198 464 aaPredicted RBP18.26■□□□□ 0.51
ACSL3-211ENST00000542810 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.03■□□□□ 0.48
ACSL3-211ENST00000542810 C1QBPQ07021 282 aaKnown RBP18.03■□□□□ 0.48
ACSL3-211ENST00000542810 HNRNPUL2Q1KMD3 747 aaKnown RBP18.03■□□□□ 0.48
ACSL3-211ENST00000542810 SAMD1Q6SPF0 538 aaPredicted RBP17.99■□□□□ 0.47
ACSL3-211ENST00000542810 NISCHQ9Y2I1 1504 aa17.89■□□□□ 0.45
ACSL3-211ENST00000542810 ATXN8OSP0DMR3 200 aa17.89■□□□□ 0.45
ACSL3-211ENST00000542810 ATF5Q9Y2D1 282 aaPredicted RBP17.84■□□□□ 0.45
ACSL3-211ENST00000542810 APLP2Q06481 763 aa17.81■□□□□ 0.44
ACSL3-211ENST00000542810 SPINK5Q9NQ38 1064 aaPredicted RBP17.8■□□□□ 0.44
ACSL3-211ENST00000542810 CACNB1Q02641 598 aaPredicted RBP17.73■□□□□ 0.43
ACSL3-211ENST00000542810 CAPN15O75808 1086 aa17.68■□□□□ 0.42
ACSL3-211ENST00000542810 TRHP20396 242 aaPredicted RBP17.62■□□□□ 0.41
ACSL3-211ENST00000542810 ZNF219Q9P2Y4 722 aaPredicted RBP17.6■□□□□ 0.41
ACSL3-211ENST00000542810 DSG3P32926 999 aa17.41■□□□□ 0.38
ACSL3-211ENST00000542810 ABCB7O75027 752 aa17.38■□□□□ 0.37
ACSL3-211ENST00000542810 POLA2Q14181 598 aa17.35■□□□□ 0.37
ACSL3-211ENST00000542810 MKRN4PQ13434 485 aaPredicted RBP17.06■□□□□ 0.32
ACSL3-211ENST00000542810 ZBTB12Q9Y330 459 aaPredicted RBP17.03■□□□□ 0.32
ACSL3-211ENST00000542810 FBLN2P98095 1184 aa16.99■□□□□ 0.31
ACSL3-211ENST00000542810 OSCARQ8IYS5 282 aa16.78■□□□□ 0.28
ACSL3-211ENST00000542810 FKBP8Q14318 412 aa16.71■□□□□ 0.27
ACSL3-211ENST00000542810 SPDYE4A6NLX3 237 aa16.65■□□□□ 0.26
ACSL3-211ENST00000542810 SPDYE2BA6NHP3 402 aa16.6■□□□□ 0.25
ACSL3-211ENST00000542810 SPDYE6P0CI01 402 aa16.6■□□□□ 0.25
ACSL3-211ENST00000542810 SPDYE2Q495Y8 402 aa16.6■□□□□ 0.25
ACSL3-211ENST00000542810 ZNF692Q9BU19 519 aaPredicted RBP16.54■□□□□ 0.24
ACSL3-211ENST00000542810 RBM42Q9BTD8 480 aaKnown RBP16.53■□□□□ 0.24
ACSL3-211ENST00000542810 SSUH2Q9Y2M2 353 aa16.52■□□□□ 0.24
ACSL3-211ENST00000542810 PROM2Q8N271 834 aa16.43■□□□□ 0.22
ACSL3-211ENST00000542810 AKT1S1Q96B36 256 aa16.37■□□□□ 0.21
ACSL3-211ENST00000542810 PABPN1Q86U42 306 aaKnown RBP eCLIP16.34■□□□□ 0.21
ACSL3-211ENST00000542810 REM2Q8IYK8 340 aaPredicted RBP16.23■□□□□ 0.19
ACSL3-211ENST00000542810 SPDYE1Q8NFV5 336 aaPredicted RBP16.09■□□□□ 0.17
ACSL3-211ENST00000542810 PITPNM1O00562 1244 aa16.06■□□□□ 0.16
ACSL3-211ENST00000542810 FBXO3Q9UK99 471 aa16.06■□□□□ 0.16
ACSL3-211ENST00000542810 STAG3Q9UJ98 1225 aa16.03■□□□□ 0.16
ACSL3-211ENST00000542810 CCDC180Q9P1Z9 1646 aa16.03■□□□□ 0.16
ACSL3-211ENST00000542810 CLEC11AQ9Y240 323 aa16.01■□□□□ 0.15
ACSL3-211ENST00000542810 VASPP50552 380 aaPredicted RBP15.89■□□□□ 0.13
ACSL3-211ENST00000542810 PRR29P0C7W0 189 aa15.87■□□□□ 0.13
ACSL3-211ENST00000542810 CHRDL2Q6WN34 429 aa15.86■□□□□ 0.13
ACSL3-211ENST00000542810 FXR2P51116 673 aaKnown RBP eCLIP15.75■□□□□ 0.11
ACSL3-211ENST00000542810 MIER1Q8N108 512 aa15.75■□□□□ 0.11
ACSL3-211ENST00000542810 CREBZFQ9NS37 354 aa15.74■□□□□ 0.11
ACSL3-211ENST00000542810 PLCD3Q8N3E9 789 aa15.73■□□□□ 0.11
ACSL3-211ENST00000542810 IFNLR1Q8IU57 520 aaPredicted RBP15.7■□□□□ 0.1
ACSL3-211ENST00000542810 PIP4P2Q8N4L2 257 aa15.7■□□□□ 0.1
ACSL3-211ENST00000542810 CHADLQ6NUI6 762 aa15.66■□□□□ 0.1
ACSL3-211ENST00000542810 PRKAR2AP13861 404 aaKnown RBP15.63■□□□□ 0.09
ACSL3-211ENST00000542810 PLEKHG5O94827 1062 aa15.61■□□□□ 0.09
ACSL3-211ENST00000542810 MNX1P50219 401 aaPredicted RBP15.61■□□□□ 0.09
ACSL3-211ENST00000542810 ABCC9O60706 1549 aa15.59■□□□□ 0.09
ACSL3-211ENST00000542810 KLHL34Q8N239 644 aa15.56■□□□□ 0.08
ACSL3-211ENST00000542810 ZBTB47Q9UFB7 747 aaPredicted RBP15.52■□□□□ 0.08
ACSL3-211ENST00000542810 FARP1Q9Y4F1 1045 aaPredicted RBP15.51■□□□□ 0.07
ACSL3-211ENST00000542810 SLC24A1O60721 1099 aa15.5■□□□□ 0.07
ACSL3-211ENST00000542810 SPOCK2Q92563 424 aa15.47■□□□□ 0.07
ACSL3-211ENST00000542810 NPM1P06748 294 aaKnown RBP eCLIP15.41■□□□□ 0.06
ACSL3-211ENST00000542810 NUBP1P53384 320 aa15.41■□□□□ 0.06
ACSL3-211ENST00000542810 RASEFQ8IZ41 740 aa15.32■□□□□ 0.04
ACSL3-211ENST00000542810 POTEHQ6S545 545 aa15.31■□□□□ 0.04
ACSL3-211ENST00000542810 RTN4Q9NQC3 1192 aaKnown RBP15.3■□□□□ 0.04
ACSL3-211ENST00000542810 AMER1Q5JTC6 1135 aaPredicted RBP15.29■□□□□ 0.04
ACSL3-211ENST00000542810 FAM212AQ96EL1 285 aa15.22■□□□□ 0.03
ACSL3-211ENST00000542810 C19orf67A6NJJ6 358 aa15.21■□□□□ 0.03
ACSL3-211ENST00000542810 DCAF8Q5TAQ9 597 aa15.21■□□□□ 0.03
ACSL3-211ENST00000542810 CIZ1Q9ULV3 898 aaPredicted RBP15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms