RNA–Protein interactions for RNA: ENST00000542576.5

CA1-224, Transcript of carbonic anhydrase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CA1, Length 1,236 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CA1-224ENST00000542576 AEBP2Q6ZN18 517 aaPredicted RBP27.73■■■□□ 2.03
CA1-224ENST00000542576 CHIC1Q5VXU3 224 aa26.54■■□□□ 1.84
CA1-224ENST00000542576 SENP3Q9H4L4 574 aaPredicted RBP23.77■■□□□ 1.4
CA1-224ENST00000542576 PHF23Q9BUL5 403 aaPredicted RBP23.41■■□□□ 1.34
CA1-224ENST00000542576 FOXD1Q16676 465 aa22.04■■□□□ 1.12
CA1-224ENST00000542576 PLPPR3Q6T4P5 718 aa21.33■■□□□ 1.01
CA1-224ENST00000542576 PIAS4Q8N2W9 510 aaPredicted RBP20.71■□□□□ 0.91
CA1-224ENST00000542576 MSH5O43196 834 aa20.68■□□□□ 0.9
CA1-224ENST00000542576 PPP6R1Q9UPN7 881 aa20.67■□□□□ 0.9
CA1-224ENST00000542576 ADRA2BP18089 450 aa20.66■□□□□ 0.9
CA1-224ENST00000542576 POTEDQ86YR6 584 aa19.84■□□□□ 0.77
CA1-224ENST00000542576 SCAF1Q9H7N4 1312 aaKnown RBP19.04■□□□□ 0.64
CA1-224ENST00000542576 MAPK8IP2Q13387 824 aaPredicted RBP18.9■□□□□ 0.62
CA1-224ENST00000542576 DMRT2Q9Y5R5 561 aa18.83■□□□□ 0.6
CA1-224ENST00000542576 PPP4R3CPQ6ZMV5 832 aa18.67■□□□□ 0.58
CA1-224ENST00000542576 CNKSR2Q8WXI2 1034 aa18.33■□□□□ 0.52
CA1-224ENST00000542576 HOXD11P31277 338 aaPredicted RBP18.18■□□□□ 0.5
CA1-224ENST00000542576 RNF216Q9NWF9 866 aaPredicted RBP18.12■□□□□ 0.49
CA1-224ENST00000542576 DCAF8L1A6NGE4 600 aa18.11■□□□□ 0.49
CA1-224ENST00000542576 NCBP3Q53F19 620 aaKnown RBP18.09■□□□□ 0.49
CA1-224ENST00000542576 NPM3O75607 178 aaKnown RBP17.72■□□□□ 0.43
CA1-224ENST00000542576 CACNB1Q02641 598 aaPredicted RBP17.64■□□□□ 0.41
CA1-224ENST00000542576 RNF39Q9H2S5 420 aa17.6■□□□□ 0.41
CA1-224ENST00000542576 DNAJC5BQ9UF47 199 aa17.56■□□□□ 0.4
CA1-224ENST00000542576 KCNA4P22459 653 aa17.51■□□□□ 0.39
CA1-224ENST00000542576 C1QBPQ07021 282 aaKnown RBP17.4■□□□□ 0.38
CA1-224ENST00000542576 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.39■□□□□ 0.37
CA1-224ENST00000542576 U3KPZ7 1027 aaPredicted RBP16.97■□□□□ 0.31
CA1-224ENST00000542576 SLC4A2P04920 1241 aa16.85■□□□□ 0.29
CA1-224ENST00000542576 CAPN15O75808 1086 aa16.72■□□□□ 0.27
CA1-224ENST00000542576 APLP2Q06481 763 aa16.68■□□□□ 0.26
CA1-224ENST00000542576 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.67■□□□□ 0.26
CA1-224ENST00000542576 HNRNPUL2Q1KMD3 747 aaKnown RBP16.67■□□□□ 0.26
CA1-224ENST00000542576 SPINK5Q9NQ38 1064 aaPredicted RBP16.67■□□□□ 0.26
CA1-224ENST00000542576 SLC4A1APQ9BWU0 796 aaKnown RBP16.61■□□□□ 0.25
CA1-224ENST00000542576 SAMD1Q6SPF0 538 aaPredicted RBP16.55■□□□□ 0.24
CA1-224ENST00000542576 DSG3P32926 999 aa16.52■□□□□ 0.24
CA1-224ENST00000542576 ZNF219Q9P2Y4 722 aaPredicted RBP16.48■□□□□ 0.23
CA1-224ENST00000542576 TRHP20396 242 aaPredicted RBP16.47■□□□□ 0.23
CA1-224ENST00000542576 MYCNP04198 464 aaPredicted RBP16.46■□□□□ 0.23
CA1-224ENST00000542576 FOXD4L1Q9NU39 408 aa16.35■□□□□ 0.21
CA1-224ENST00000542576 ABCB7O75027 752 aa16.29■□□□□ 0.2
CA1-224ENST00000542576 ZBTB22O15209 634 aa16.04■□□□□ 0.16
CA1-224ENST00000542576 POLA2Q14181 598 aa16.04■□□□□ 0.16
CA1-224ENST00000542576 ATF5Q9Y2D1 282 aaPredicted RBP15.94■□□□□ 0.14
CA1-224ENST00000542576 RBM42Q9BTD8 480 aaKnown RBP15.87■□□□□ 0.13
CA1-224ENST00000542576 ATXN8OSP0DMR3 200 aa15.84■□□□□ 0.13
CA1-224ENST00000542576 ZBTB12Q9Y330 459 aaPredicted RBP15.82■□□□□ 0.12
CA1-224ENST00000542576 POTEHQ6S545 545 aa15.62■□□□□ 0.09
CA1-224ENST00000542576 OSCARQ8IYS5 282 aa15.52■□□□□ 0.08
CA1-224ENST00000542576 FBLN2P98095 1184 aa15.48■□□□□ 0.07
CA1-224ENST00000542576 AKT1S1Q96B36 256 aa15.48■□□□□ 0.07
CA1-224ENST00000542576 CSRNP3Q8WYN3 585 aa15.46■□□□□ 0.07
CA1-224ENST00000542576 EHMT2Q96KQ7 1210 aa15.41■□□□□ 0.06
CA1-224ENST00000542576 CHRDL2Q6WN34 429 aa15.4■□□□□ 0.06
CA1-224ENST00000542576 REM2Q8IYK8 340 aaPredicted RBP15.3■□□□□ 0.04
CA1-224ENST00000542576 SPDYE2BA6NHP3 402 aa15.28■□□□□ 0.04
CA1-224ENST00000542576 SPDYE6P0CI01 402 aa15.28■□□□□ 0.04
CA1-224ENST00000542576 SPDYE2Q495Y8 402 aa15.28■□□□□ 0.04
CA1-224ENST00000542576 MKRN4PQ13434 485 aaPredicted RBP15.24■□□□□ 0.03
CA1-224ENST00000542576 PITPNM1O00562 1244 aa15.13■□□□□ 0.01
CA1-224ENST00000542576 ZNF692Q9BU19 519 aaPredicted RBP15.12■□□□□ 0.01
CA1-224ENST00000542576 SSUH2Q9Y2M2 353 aa15.05■□□□□ -0
CA1-224ENST00000542576 PIP4P2Q8N4L2 257 aa15.03■□□□□ -0
CA1-224ENST00000542576 SPDYE1Q8NFV5 336 aaPredicted RBP15.01□□□□□ -0.01
CA1-224ENST00000542576 FXR2P51116 673 aaKnown RBP eCLIP14.96□□□□□ -0.01
CA1-224ENST00000542576 CLEC11AQ9Y240 323 aa14.96□□□□□ -0.01
CA1-224ENST00000542576 PABPN1Q86U42 306 aaKnown RBP eCLIP14.89□□□□□ -0.03
CA1-224ENST00000542576 HAX1O00165 279 aa14.77□□□□□ -0.05
CA1-224ENST00000542576 PRKAR2AP13861 404 aaKnown RBP14.77□□□□□ -0.05
CA1-224ENST00000542576 PRR29P0C7W0 189 aa14.74□□□□□ -0.05
CA1-224ENST00000542576 SP7Q8TDD2 431 aaPredicted RBP14.72□□□□□ -0.05
CA1-224ENST00000542576 SPDYE4A6NLX3 237 aa14.68□□□□□ -0.06
CA1-224ENST00000542576 CHADLQ6NUI6 762 aa14.59□□□□□ -0.07
CA1-224ENST00000542576 STAG3Q9UJ98 1225 aa14.57□□□□□ -0.08
CA1-224ENST00000542576 C19orf67A6NJJ6 358 aa14.48□□□□□ -0.09
CA1-224ENST00000542576 EVX2Q03828 476 aa14.47□□□□□ -0.09
CA1-224ENST00000542576 FARP1Q9Y4F1 1045 aaPredicted RBP14.43□□□□□ -0.1
CA1-224ENST00000542576 CREBZFQ9NS37 354 aa14.33□□□□□ -0.12
CA1-224ENST00000542576 CD44P16070 742 aaKnown RBP14.32□□□□□ -0.12
CA1-224ENST00000542576 PROM2Q8N271 834 aa14.28□□□□□ -0.12
CA1-224ENST00000542576 GABBR2O75899 941 aa14.23□□□□□ -0.13
CA1-224ENST00000542576 NPM1P06748 294 aaKnown RBP eCLIP14.18□□□□□ -0.14
CA1-224ENST00000542576 CLCN6P51797 869 aa14.16□□□□□ -0.14
CA1-224ENST00000542576 PAK3O75914 559 aaPredicted RBP14.14□□□□□ -0.15
CA1-224ENST00000542576 ZRANB1Q9UGI0 708 aa14.14□□□□□ -0.15
CA1-224ENST00000542576 ZNF579Q8NAF0 562 aaKnown RBP14.09□□□□□ -0.15
CA1-224ENST00000542576 PLEKHG5O94827 1062 aa14.08□□□□□ -0.16
CA1-224ENST00000542576 FKBP8Q14318 412 aa14.08□□□□□ -0.16
CA1-224ENST00000542576 MNX1P50219 401 aaPredicted RBP14.07□□□□□ -0.16
CA1-224ENST00000542576 MIER1Q8N108 512 aa14.01□□□□□ -0.17
CA1-224ENST00000542576 DCBLD2Q96PD2 775 aa13.96□□□□□ -0.17
CA1-224ENST00000542576 PLCD3Q8N3E9 789 aa13.94□□□□□ -0.18
CA1-224ENST00000542576 PHF12Q96QT6 1004 aa13.92□□□□□ -0.18
CA1-224ENST00000542576 GALR2O43603 387 aaPredicted RBP13.88□□□□□ -0.19
CA1-224ENST00000542576 ZBTB47Q9UFB7 747 aaPredicted RBP13.88□□□□□ -0.19
CA1-224ENST00000542576 POTEIP0CG38 1075 aa13.87□□□□□ -0.19
CA1-224ENST00000542576 TSPYL2Q9H2G4 693 aaPredicted RBP13.87□□□□□ -0.19
CA1-224ENST00000542576 FBXO3Q9UK99 471 aa13.83□□□□□ -0.2
CA1-224ENST00000542576 LHX8Q68G74 356 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms