RNA–Protein interactions for RNA: ENST00000542104.5

RASSF3-204, Transcript of Ras association domain family member 3, humanhuman

TSL 1 (best) BASIC

Gene RASSF3, Length 3,492 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RASSF3-204ENST00000542104 NISCHQ9Y2I1 1504 aa29.89■■■□□ 2.38
RASSF3-204ENST00000542104 SHROOM4Q9ULL8 1493 aa25.89■■□□□ 1.74
RASSF3-204ENST00000542104 DCAF8L2P0C7V8 631 aa25.58■■□□□ 1.69
RASSF3-204ENST00000542104 SUPT5HO00267 1087 aaKnown RBP25.38■■□□□ 1.65
RASSF3-204ENST00000542104 CCDC180Q9P1Z9 1646 aa25.23■■□□□ 1.63
RASSF3-204ENST00000542104 ZCCHC6Q5VYS8 1495 aaKnown RBP25.17■■□□□ 1.62
RASSF3-204ENST00000542104 CHIC1Q5VXU3 224 aa24.33■■□□□ 1.49
RASSF3-204ENST00000542104 DCAF1Q9Y4B6 1507 aa24.29■■□□□ 1.48
RASSF3-204ENST00000542104 MYO15BQ96JP2 1530 aa24.06■■□□□ 1.44
RASSF3-204ENST00000542104 ABCC9O60706 1549 aa24.05■■□□□ 1.44
RASSF3-204ENST00000542104 SCRIBQ14160 1630 aa23.99■■□□□ 1.43
RASSF3-204ENST00000542104 LOC105371045A0A1W2PR82 267 aa23.8■■□□□ 1.4
RASSF3-204ENST00000542104 RSF1Q96T23 1441 aaPredicted RBP23.69■■□□□ 1.38
RASSF3-204ENST00000542104 PCGF6Q9BYE7 350 aa23.63■■□□□ 1.37
RASSF3-204ENST00000542104 FAM9AQ8IZU1 332 aaPredicted RBP23.54■■□□□ 1.36
RASSF3-204ENST00000542104 TRIM41Q8WV44 630 aa23.53■■□□□ 1.36
RASSF3-204ENST00000542104 EHMT2Q96KQ7 1210 aa23.52■■□□□ 1.36
RASSF3-204ENST00000542104 NACADO15069 1562 aa23.52■■□□□ 1.36
RASSF3-204ENST00000542104 CECR2Q9BXF3 1484 aa23.49■■□□□ 1.35
RASSF3-204ENST00000542104 RB1CC1Q8TDY2 1594 aa23.37■■□□□ 1.33
RASSF3-204ENST00000542104 MROH2BQ7Z745 1585 aa23.31■■□□□ 1.32
RASSF3-204ENST00000542104 HRCP23327 699 aa23.27■■□□□ 1.32
RASSF3-204ENST00000542104 PABPN1Q86U42 306 aaKnown RBP eCLIP23.17■■□□□ 1.3
RASSF3-204ENST00000542104 WIZO95785 1651 aa23.15■■□□□ 1.3
RASSF3-204ENST00000542104 PPARGC1BQ86YN6 1023 aaKnown RBP23.05■■□□□ 1.28
RASSF3-204ENST00000542104 TRIM26Q12899 539 aaPredicted RBP23.02■■□□□ 1.28
RASSF3-204ENST00000542104 BAZ1AQ9NRL2 1556 aaPredicted RBP22.95■■□□□ 1.26
RASSF3-204ENST00000542104 SMARCA4P51532 1647 aa22.75■■□□□ 1.23
RASSF3-204ENST00000542104 UNC13AQ9UPW8 1703 aa22.75■■□□□ 1.23
RASSF3-204ENST00000542104 CCDC88BA6NC98 1476 aa22.74■■□□□ 1.23
RASSF3-204ENST00000542104 ABCC8Q09428 1581 aa22.68■■□□□ 1.22
RASSF3-204ENST00000542104 TOP2AP11388 1531 aaKnown RBP22.68■■□□□ 1.22
RASSF3-204ENST00000542104 TTBK1Q5TCY1 1321 aaPredicted RBP22.67■■□□□ 1.22
RASSF3-204ENST00000542104 SMARCA2P51531 1590 aa22.58■■□□□ 1.2
RASSF3-204ENST00000542104 BICRAQ9NZM4 1560 aa22.56■■□□□ 1.2
RASSF3-204ENST00000542104 UBTFP17480 764 aaKnown RBP22.54■■□□□ 1.2
RASSF3-204ENST00000542104 SOGA1O94964 1423 aa22.49■■□□□ 1.19
RASSF3-204ENST00000542104 EIF4G1Q04637 1599 aaKnown RBP22.48■■□□□ 1.19
RASSF3-204ENST00000542104 CSRNP3Q8WYN3 585 aa22.43■■□□□ 1.18
RASSF3-204ENST00000542104 RUSC2Q8N2Y8 1516 aa22.38■■□□□ 1.17
RASSF3-204ENST00000542104 ZEB1P37275 1124 aaPredicted RBP22.37■■□□□ 1.17
RASSF3-204ENST00000542104 RANGAP1P46060 587 aaPredicted RBP22.36■■□□□ 1.17
RASSF3-204ENST00000542104 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.33■■□□□ 1.16
RASSF3-204ENST00000542104 WRNQ14191 1432 aaPredicted RBP eCLIP22.31■■□□□ 1.16
RASSF3-204ENST00000542104 ATAD2BQ9ULI0 1458 aa22.31■■□□□ 1.16
RASSF3-204ENST00000542104 BAZ1BQ9UIG0 1483 aaKnown RBP22.31■■□□□ 1.16
RASSF3-204ENST00000542104 CEP162Q5TB80 1403 aa22.27■■□□□ 1.16
RASSF3-204ENST00000542104 CCER1Q8TC90 406 aaPredicted RBP22.25■■□□□ 1.15
RASSF3-204ENST00000542104 TNIKQ9UKE5 1360 aa22.18■■□□□ 1.14
RASSF3-204ENST00000542104 PEG3Q9GZU2 1588 aa22.15■■□□□ 1.14
RASSF3-204ENST00000542104 EEA1Q15075 1411 aa22.14■■□□□ 1.13
RASSF3-204ENST00000542104 SYNJ1O43426 1573 aa22.09■■□□□ 1.13
RASSF3-204ENST00000542104 GOLGA3Q08378 1498 aa22.08■■□□□ 1.12
RASSF3-204ENST00000542104 APLP2Q06481 763 aa21.99■■□□□ 1.11
RASSF3-204ENST00000542104 HNRNPUL2Q1KMD3 747 aaKnown RBP21.96■■□□□ 1.11
RASSF3-204ENST00000542104 CEP164Q9UPV0 1460 aa21.96■■□□□ 1.11
RASSF3-204ENST00000542104 CLIP1P30622 1438 aa21.93■■□□□ 1.1
RASSF3-204ENST00000542104 RAPGEF2Q9Y4G8 1499 aa21.9■■□□□ 1.1
RASSF3-204ENST00000542104 SCAF1Q9H7N4 1312 aaKnown RBP21.85■■□□□ 1.09
RASSF3-204ENST00000542104 NCAPD3P42695 1498 aa21.85■■□□□ 1.09
RASSF3-204ENST00000542104 PELP1Q8IZL8 1130 aaKnown RBP21.78■■□□□ 1.08
RASSF3-204ENST00000542104 KIF21BO75037 1637 aa21.75■■□□□ 1.07
RASSF3-204ENST00000542104 TOP2BQ02880 1626 aa21.75■■□□□ 1.07
RASSF3-204ENST00000542104 VPS8Q8N3P4 1428 aa21.71■■□□□ 1.07
RASSF3-204ENST00000542104 HMGXB3Q12766 1538 aa21.71■■□□□ 1.07
RASSF3-204ENST00000542104 CUX1P39880 1505 aa21.68■■□□□ 1.06
RASSF3-204ENST00000542104 KIF27Q86VH2 1401 aa21.65■■□□□ 1.06
RASSF3-204ENST00000542104 CFTRP13569 1480 aa21.64■■□□□ 1.06
RASSF3-204ENST00000542104 DIEXFQ68CQ4 756 aaKnown RBP21.63■■□□□ 1.05
RASSF3-204ENST00000542104 KANK4Q5T7N3 995 aaPredicted RBP21.58■■□□□ 1.05
RASSF3-204ENST00000542104 BIVM-ERCC5R4GMW8 1640 aa21.58■■□□□ 1.04
RASSF3-204ENST00000542104 PRXQ9BXM0 1461 aa21.57■■□□□ 1.04
RASSF3-204ENST00000542104 CADPSQ9ULU8 1353 aa21.56■■□□□ 1.04
RASSF3-204ENST00000542104 ITGAEP38570 1179 aa21.55■■□□□ 1.04
RASSF3-204ENST00000542104 CUX2O14529 1486 aa21.53■■□□□ 1.04
RASSF3-204ENST00000542104 ATP1B4Q9UN42 357 aaPredicted RBP21.53■■□□□ 1.04
RASSF3-204ENST00000542104 P3H3Q8IVL6 736 aa21.5■■□□□ 1.03
RASSF3-204ENST00000542104 ARAP1Q96P48 1450 aa21.46■■□□□ 1.03
RASSF3-204ENST00000542104 ZNF316A6NFI3 1004 aaPredicted RBP21.45■■□□□ 1.02
RASSF3-204ENST00000542104 ERICH3Q5RHP9 1530 aa21.45■■□□□ 1.02
RASSF3-204ENST00000542104 IGF1RP08069 1367 aa21.44■■□□□ 1.02
RASSF3-204ENST00000542104 CC2D2AQ9P2K1 1620 aa21.44■■□□□ 1.02
RASSF3-204ENST00000542104 CARMIL1Q5VZK9 1371 aa21.4■■□□□ 1.02
RASSF3-204ENST00000542104 FGD5Q6ZNL6 1462 aa21.39■■□□□ 1.01
RASSF3-204ENST00000542104 FANCD2Q9BXW9 1451 aa21.34■■□□□ 1.01
RASSF3-204ENST00000542104 ARHGAP35Q9NRY4 1499 aa21.33■■□□□ 1.01
RASSF3-204ENST00000542104 NESP48681 1621 aa21.33■■□□□ 1
RASSF3-204ENST00000542104 YTHDC1Q96MU7 727 aaKnown RBP21.33■■□□□ 1
RASSF3-204ENST00000542104 NEUROD1Q13562 356 aa21.31■■□□□ 1
RASSF3-204ENST00000542104 DNAJC5BQ9UF47 199 aa21.31■■□□□ 1
RASSF3-204ENST00000542104 RAD54L2Q9Y4B4 1467 aa21.29■■□□□ 1
RASSF3-204ENST00000542104 FAM50AQ14320 339 aaKnown RBP21.24■□□□□ 0.99
RASSF3-204ENST00000542104 ACIN1Q9UKV3 1341 aaKnown RBP21.24■□□□□ 0.99
RASSF3-204ENST00000542104 GTF3C3Q9Y5Q9 886 aa21.24■□□□□ 0.99
RASSF3-204ENST00000542104 CENPBP07199 599 aaPredicted RBP21.22■□□□□ 0.99
RASSF3-204ENST00000542104 CCNB3Q8WWL7 1395 aa21.2■□□□□ 0.98
RASSF3-204ENST00000542104 MIER1Q8N108 512 aa21.19■□□□□ 0.98
RASSF3-204ENST00000542104 DHX57Q6P158 1386 aaKnown RBP21.17■□□□□ 0.98
RASSF3-204ENST00000542104 PRDM2Q13029 1718 aa21.16■□□□□ 0.98
RASSF3-204ENST00000542104 TDRD9Q8NDG6 1382 aaKnown RBP21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms