RNA–Protein interactions for RNA: ENST00000541212.5

PSMD9-207, Transcript of proteasome 26S subunit, non-ATPase 9, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PSMD9, Length 2,784 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD9-207ENST00000541212 NISCHQ9Y2I1 1504 aa30.36■■■□□ 2.45
PSMD9-207ENST00000541212 SHROOM4Q9ULL8 1493 aa26.42■■□□□ 1.82
PSMD9-207ENST00000541212 SUPT5HO00267 1087 aaKnown RBP25.86■■□□□ 1.73
PSMD9-207ENST00000541212 DCAF8L2P0C7V8 631 aa25.86■■□□□ 1.73
PSMD9-207ENST00000541212 ZCCHC6Q5VYS8 1495 aaKnown RBP25.61■■□□□ 1.69
PSMD9-207ENST00000541212 CCDC180Q9P1Z9 1646 aa25.55■■□□□ 1.68
PSMD9-207ENST00000541212 CHIC1Q5VXU3 224 aa24.88■■□□□ 1.57
PSMD9-207ENST00000541212 MYO15BQ96JP2 1530 aa24.81■■□□□ 1.56
PSMD9-207ENST00000541212 DCAF1Q9Y4B6 1507 aa24.61■■□□□ 1.53
PSMD9-207ENST00000541212 LOC105371045A0A1W2PR82 267 aa24.41■■□□□ 1.5
PSMD9-207ENST00000541212 SCRIBQ14160 1630 aa24.4■■□□□ 1.5
PSMD9-207ENST00000541212 ABCC9O60706 1549 aa24.32■■□□□ 1.48
PSMD9-207ENST00000541212 PCGF6Q9BYE7 350 aa24.22■■□□□ 1.47
PSMD9-207ENST00000541212 RSF1Q96T23 1441 aaPredicted RBP24.13■■□□□ 1.45
PSMD9-207ENST00000541212 EHMT2Q96KQ7 1210 aa24.03■■□□□ 1.44
PSMD9-207ENST00000541212 FAM9AQ8IZU1 332 aaPredicted RBP24■■□□□ 1.43
PSMD9-207ENST00000541212 CECR2Q9BXF3 1484 aa23.95■■□□□ 1.42
PSMD9-207ENST00000541212 HRCP23327 699 aa23.92■■□□□ 1.42
PSMD9-207ENST00000541212 RB1CC1Q8TDY2 1594 aa23.89■■□□□ 1.42
PSMD9-207ENST00000541212 TRIM41Q8WV44 630 aa23.88■■□□□ 1.41
PSMD9-207ENST00000541212 PPARGC1BQ86YN6 1023 aaKnown RBP23.83■■□□□ 1.41
PSMD9-207ENST00000541212 MROH2BQ7Z745 1585 aa23.76■■□□□ 1.39
PSMD9-207ENST00000541212 NACADO15069 1562 aa23.74■■□□□ 1.39
PSMD9-207ENST00000541212 WIZO95785 1651 aa23.63■■□□□ 1.37
PSMD9-207ENST00000541212 TRIM26Q12899 539 aaPredicted RBP23.48■■□□□ 1.35
PSMD9-207ENST00000541212 PABPN1Q86U42 306 aaKnown RBP eCLIP23.46■■□□□ 1.35
PSMD9-207ENST00000541212 BAZ1AQ9NRL2 1556 aaPredicted RBP23.24■■□□□ 1.31
PSMD9-207ENST00000541212 UNC13AQ9UPW8 1703 aa23.19■■□□□ 1.3
PSMD9-207ENST00000541212 ABCC8Q09428 1581 aa23.18■■□□□ 1.3
PSMD9-207ENST00000541212 TTBK1Q5TCY1 1321 aaPredicted RBP23.17■■□□□ 1.3
PSMD9-207ENST00000541212 CCDC88BA6NC98 1476 aa23.14■■□□□ 1.3
PSMD9-207ENST00000541212 SMARCA4P51532 1647 aa23.12■■□□□ 1.29
PSMD9-207ENST00000541212 EIF4G1Q04637 1599 aaKnown RBP23.04■■□□□ 1.28
PSMD9-207ENST00000541212 TOP2AP11388 1531 aaKnown RBP23.04■■□□□ 1.28
PSMD9-207ENST00000541212 SMARCA2P51531 1590 aa23■■□□□ 1.27
PSMD9-207ENST00000541212 SOGA1O94964 1423 aa22.98■■□□□ 1.27
PSMD9-207ENST00000541212 BICRAQ9NZM4 1560 aa22.94■■□□□ 1.26
PSMD9-207ENST00000541212 RUSC2Q8N2Y8 1516 aa22.93■■□□□ 1.26
PSMD9-207ENST00000541212 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.88■■□□□ 1.25
PSMD9-207ENST00000541212 UBTFP17480 764 aaKnown RBP22.83■■□□□ 1.25
PSMD9-207ENST00000541212 CSRNP3Q8WYN3 585 aa22.77■■□□□ 1.24
PSMD9-207ENST00000541212 RANGAP1P46060 587 aaPredicted RBP22.73■■□□□ 1.23
PSMD9-207ENST00000541212 ZEB1P37275 1124 aaPredicted RBP22.72■■□□□ 1.23
PSMD9-207ENST00000541212 CEP162Q5TB80 1403 aa22.7■■□□□ 1.23
PSMD9-207ENST00000541212 CCER1Q8TC90 406 aaPredicted RBP22.67■■□□□ 1.22
PSMD9-207ENST00000541212 WRNQ14191 1432 aaPredicted RBP eCLIP22.64■■□□□ 1.22
PSMD9-207ENST00000541212 ATAD2BQ9ULI0 1458 aa22.62■■□□□ 1.21
PSMD9-207ENST00000541212 TNIKQ9UKE5 1360 aa22.56■■□□□ 1.2
PSMD9-207ENST00000541212 BAZ1BQ9UIG0 1483 aaKnown RBP22.56■■□□□ 1.2
PSMD9-207ENST00000541212 SYNJ1O43426 1573 aa22.55■■□□□ 1.2
PSMD9-207ENST00000541212 PEG3Q9GZU2 1588 aa22.49■■□□□ 1.19
PSMD9-207ENST00000541212 GOLGA3Q08378 1498 aa22.43■■□□□ 1.18
PSMD9-207ENST00000541212 EEA1Q15075 1411 aa22.4■■□□□ 1.18
PSMD9-207ENST00000541212 HNRNPUL2Q1KMD3 747 aaKnown RBP22.39■■□□□ 1.17
PSMD9-207ENST00000541212 RAPGEF2Q9Y4G8 1499 aa22.35■■□□□ 1.17
PSMD9-207ENST00000541212 CLIP1P30622 1438 aa22.29■■□□□ 1.16
PSMD9-207ENST00000541212 CEP164Q9UPV0 1460 aa22.28■■□□□ 1.16
PSMD9-207ENST00000541212 APLP2Q06481 763 aa22.16■■□□□ 1.14
PSMD9-207ENST00000541212 KIF21BO75037 1637 aa22.15■■□□□ 1.14
PSMD9-207ENST00000541212 SCAF1Q9H7N4 1312 aaKnown RBP22.15■■□□□ 1.14
PSMD9-207ENST00000541212 DIEXFQ68CQ4 756 aaKnown RBP22.12■■□□□ 1.13
PSMD9-207ENST00000541212 TOP2BQ02880 1626 aa22.12■■□□□ 1.13
PSMD9-207ENST00000541212 VPS8Q8N3P4 1428 aa22.1■■□□□ 1.13
PSMD9-207ENST00000541212 NCAPD3P42695 1498 aa22.09■■□□□ 1.13
PSMD9-207ENST00000541212 CUX1P39880 1505 aa22.07■■□□□ 1.12
PSMD9-207ENST00000541212 KANK4Q5T7N3 995 aaPredicted RBP22.05■■□□□ 1.12
PSMD9-207ENST00000541212 NEUROD1Q13562 356 aa21.97■■□□□ 1.11
PSMD9-207ENST00000541212 BIVM-ERCC5R4GMW8 1640 aa21.97■■□□□ 1.11
PSMD9-207ENST00000541212 HMGXB3Q12766 1538 aa21.96■■□□□ 1.11
PSMD9-207ENST00000541212 PRXQ9BXM0 1461 aa21.96■■□□□ 1.11
PSMD9-207ENST00000541212 CFTRP13569 1480 aa21.94■■□□□ 1.1
PSMD9-207ENST00000541212 ITGAEP38570 1179 aa21.92■■□□□ 1.1
PSMD9-207ENST00000541212 ARAP1Q96P48 1450 aa21.91■■□□□ 1.1
PSMD9-207ENST00000541212 ZNF316A6NFI3 1004 aaPredicted RBP21.9■■□□□ 1.1
PSMD9-207ENST00000541212 KIF27Q86VH2 1401 aa21.9■■□□□ 1.1
PSMD9-207ENST00000541212 YTHDC1Q96MU7 727 aaKnown RBP21.87■■□□□ 1.09
PSMD9-207ENST00000541212 P3H3Q8IVL6 736 aa21.85■■□□□ 1.09
PSMD9-207ENST00000541212 CUX2O14529 1486 aa21.83■■□□□ 1.08
PSMD9-207ENST00000541212 ACIN1Q9UKV3 1341 aaKnown RBP21.82■■□□□ 1.08
PSMD9-207ENST00000541212 ERICH3Q5RHP9 1530 aa21.78■■□□□ 1.08
PSMD9-207ENST00000541212 IGF1RP08069 1367 aa21.78■■□□□ 1.08
PSMD9-207ENST00000541212 CADPSQ9ULU8 1353 aa21.78■■□□□ 1.08
PSMD9-207ENST00000541212 ATP1B4Q9UN42 357 aaPredicted RBP21.76■■□□□ 1.07
PSMD9-207ENST00000541212 MIER1Q8N108 512 aa21.76■■□□□ 1.07
PSMD9-207ENST00000541212 ARHGAP35Q9NRY4 1499 aa21.75■■□□□ 1.07
PSMD9-207ENST00000541212 DNAJC5BQ9UF47 199 aa21.72■■□□□ 1.07
PSMD9-207ENST00000541212 GTF3C3Q9Y5Q9 886 aa21.71■■□□□ 1.07
PSMD9-207ENST00000541212 FGD5Q6ZNL6 1462 aa21.71■■□□□ 1.07
PSMD9-207ENST00000541212 CC2D2AQ9P2K1 1620 aa21.7■■□□□ 1.06
PSMD9-207ENST00000541212 CARMIL1Q5VZK9 1371 aa21.68■■□□□ 1.06
PSMD9-207ENST00000541212 NESP48681 1621 aa21.67■■□□□ 1.06
PSMD9-207ENST00000541212 DHX57Q6P158 1386 aaKnown RBP21.65■■□□□ 1.06
PSMD9-207ENST00000541212 RAD54L2Q9Y4B4 1467 aa21.65■■□□□ 1.06
PSMD9-207ENST00000541212 PELP1Q8IZL8 1130 aaKnown RBP21.62■■□□□ 1.05
PSMD9-207ENST00000541212 CENPBP07199 599 aaPredicted RBP21.59■■□□□ 1.05
PSMD9-207ENST00000541212 FANCD2Q9BXW9 1451 aa21.59■■□□□ 1.05
PSMD9-207ENST00000541212 CCNB3Q8WWL7 1395 aa21.57■■□□□ 1.04
PSMD9-207ENST00000541212 FAM50AQ14320 339 aaKnown RBP21.54■■□□□ 1.04
PSMD9-207ENST00000541212 RRBP1Q9P2E9 1410 aaKnown RBP21.53■■□□□ 1.04
PSMD9-207ENST00000541212 PRDM2Q13029 1718 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms