RNA–Protein interactions for RNA: ENST00000540830.5

CEP57-212, Transcript of centrosomal protein 57, humanhuman

TSL 1 (best)

Gene CEP57, Length 1,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP57-212ENST00000540830 NISCHQ9Y2I1 1504 aa30.43■■■□□ 2.46
CEP57-212ENST00000540830 CCDC180Q9P1Z9 1646 aa25.93■■□□□ 1.74
CEP57-212ENST00000540830 ZCCHC6Q5VYS8 1495 aaKnown RBP25.88■■□□□ 1.73
CEP57-212ENST00000540830 SHROOM4Q9ULL8 1493 aa25.56■■□□□ 1.68
CEP57-212ENST00000540830 SUPT5HO00267 1087 aaKnown RBP25.33■■□□□ 1.65
CEP57-212ENST00000540830 DCAF1Q9Y4B6 1507 aa25.3■■□□□ 1.64
CEP57-212ENST00000540830 HRCP23327 699 aa25.18■■□□□ 1.62
CEP57-212ENST00000540830 CHIC1Q5VXU3 224 aa25.16■■□□□ 1.62
CEP57-212ENST00000540830 MYO15BQ96JP2 1530 aa25.09■■□□□ 1.61
CEP57-212ENST00000540830 PCGF6Q9BYE7 350 aa24.57■■□□□ 1.52
CEP57-212ENST00000540830 ABCC9O60706 1549 aa24.51■■□□□ 1.51
CEP57-212ENST00000540830 TRIM26Q12899 539 aaPredicted RBP24.35■■□□□ 1.49
CEP57-212ENST00000540830 DCAF8L2P0C7V8 631 aa24.33■■□□□ 1.49
CEP57-212ENST00000540830 ZEB1P37275 1124 aaPredicted RBP24.22■■□□□ 1.47
CEP57-212ENST00000540830 RSF1Q96T23 1441 aaPredicted RBP24.14■■□□□ 1.45
CEP57-212ENST00000540830 LOC105371045A0A1W2PR82 267 aa24.13■■□□□ 1.45
CEP57-212ENST00000540830 PPARGC1BQ86YN6 1023 aaKnown RBP24.13■■□□□ 1.45
CEP57-212ENST00000540830 RB1CC1Q8TDY2 1594 aa24.1■■□□□ 1.45
CEP57-212ENST00000540830 PELP1Q8IZL8 1130 aaKnown RBP23.86■■□□□ 1.41
CEP57-212ENST00000540830 SCRIBQ14160 1630 aa23.86■■□□□ 1.41
CEP57-212ENST00000540830 TRIM41Q8WV44 630 aa23.8■■□□□ 1.4
CEP57-212ENST00000540830 NACADO15069 1562 aa23.78■■□□□ 1.4
CEP57-212ENST00000540830 EIF4G1Q04637 1599 aaKnown RBP23.54■■□□□ 1.36
CEP57-212ENST00000540830 BAZ1AQ9NRL2 1556 aaPredicted RBP23.53■■□□□ 1.36
CEP57-212ENST00000540830 MROH2BQ7Z745 1585 aa23.51■■□□□ 1.35
CEP57-212ENST00000540830 CECR2Q9BXF3 1484 aa23.45■■□□□ 1.34
CEP57-212ENST00000540830 WRNQ14191 1432 aaPredicted RBP eCLIP23.39■■□□□ 1.34
CEP57-212ENST00000540830 WIZO95785 1651 aa23.38■■□□□ 1.33
CEP57-212ENST00000540830 SCAF1Q9H7N4 1312 aaKnown RBP23.29■■□□□ 1.32
CEP57-212ENST00000540830 FAM9AQ8IZU1 332 aaPredicted RBP23.25■■□□□ 1.31
CEP57-212ENST00000540830 TOP2AP11388 1531 aaKnown RBP23.25■■□□□ 1.31
CEP57-212ENST00000540830 EEA1Q15075 1411 aa23.21■■□□□ 1.31
CEP57-212ENST00000540830 TNIKQ9UKE5 1360 aa23.1■■□□□ 1.29
CEP57-212ENST00000540830 ACIN1Q9UKV3 1341 aaKnown RBP23.08■■□□□ 1.29
CEP57-212ENST00000540830 SMARCA4P51532 1647 aa23.08■■□□□ 1.29
CEP57-212ENST00000540830 SMARCA2P51531 1590 aa23.06■■□□□ 1.28
CEP57-212ENST00000540830 CCER1Q8TC90 406 aaPredicted RBP23.03■■□□□ 1.28
CEP57-212ENST00000540830 CEP162Q5TB80 1403 aa23.01■■□□□ 1.27
CEP57-212ENST00000540830 CCDC88BA6NC98 1476 aa22.99■■□□□ 1.27
CEP57-212ENST00000540830 CENPBP07199 599 aaPredicted RBP22.96■■□□□ 1.27
CEP57-212ENST00000540830 MYT1Q01538 1121 aa22.94■■□□□ 1.26
CEP57-212ENST00000540830 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.93■■□□□ 1.26
CEP57-212ENST00000540830 ABCC8Q09428 1581 aa22.9■■□□□ 1.26
CEP57-212ENST00000540830 DIEXFQ68CQ4 756 aaKnown RBP22.9■■□□□ 1.26
CEP57-212ENST00000540830 GOLGA3Q08378 1498 aa22.86■■□□□ 1.25
CEP57-212ENST00000540830 PEG3Q9GZU2 1588 aa22.85■■□□□ 1.25
CEP57-212ENST00000540830 NEUROD1Q13562 356 aa22.84■■□□□ 1.25
CEP57-212ENST00000540830 KIF21BO75037 1637 aa22.8■■□□□ 1.24
CEP57-212ENST00000540830 CSRNP3Q8WYN3 585 aa22.8■■□□□ 1.24
CEP57-212ENST00000540830 UNC13AQ9UPW8 1703 aa22.79■■□□□ 1.24
CEP57-212ENST00000540830 SOGA1O94964 1423 aa22.79■■□□□ 1.24
CEP57-212ENST00000540830 EHMT2Q96KQ7 1210 aa22.74■■□□□ 1.23
CEP57-212ENST00000540830 ZNF316A6NFI3 1004 aaPredicted RBP22.72■■□□□ 1.23
CEP57-212ENST00000540830 CEP164Q9UPV0 1460 aa22.72■■□□□ 1.23
CEP57-212ENST00000540830 BAZ1BQ9UIG0 1483 aaKnown RBP22.7■■□□□ 1.22
CEP57-212ENST00000540830 GTF3C3Q9Y5Q9 886 aa22.66■■□□□ 1.22
CEP57-212ENST00000540830 RUSC2Q8N2Y8 1516 aa22.59■■□□□ 1.21
CEP57-212ENST00000540830 VPS8Q8N3P4 1428 aa22.57■■□□□ 1.2
CEP57-212ENST00000540830 CLSPNQ9HAW4 1339 aa22.56■■□□□ 1.2
CEP57-212ENST00000540830 UBTFP17480 764 aaKnown RBP22.51■■□□□ 1.19
CEP57-212ENST00000540830 SYNJ1O43426 1573 aa22.5■■□□□ 1.19
CEP57-212ENST00000540830 CLIP1P30622 1438 aa22.5■■□□□ 1.19
CEP57-212ENST00000540830 BICRAQ9NZM4 1560 aa22.49■■□□□ 1.19
CEP57-212ENST00000540830 ERICH3Q5RHP9 1530 aa22.4■■□□□ 1.18
CEP57-212ENST00000540830 TOP2BQ02880 1626 aa22.36■■□□□ 1.17
CEP57-212ENST00000540830 BIVM-ERCC5R4GMW8 1640 aa22.34■■□□□ 1.17
CEP57-212ENST00000540830 ATAD2BQ9ULI0 1458 aa22.33■■□□□ 1.17
CEP57-212ENST00000540830 RAPGEF2Q9Y4G8 1499 aa22.28■■□□□ 1.16
CEP57-212ENST00000540830 MIER1Q8N108 512 aa22.26■■□□□ 1.15
CEP57-212ENST00000540830 CUX2O14529 1486 aa22.26■■□□□ 1.15
CEP57-212ENST00000540830 APLP2Q06481 763 aa22.25■■□□□ 1.15
CEP57-212ENST00000540830 PRXQ9BXM0 1461 aa22.24■■□□□ 1.15
CEP57-212ENST00000540830 TTBK1Q5TCY1 1321 aaPredicted RBP22.21■■□□□ 1.15
CEP57-212ENST00000540830 RRBP1Q9P2E9 1410 aaKnown RBP22.19■■□□□ 1.14
CEP57-212ENST00000540830 DHX57Q6P158 1386 aaKnown RBP22.17■■□□□ 1.14
CEP57-212ENST00000540830 HNRNPUL2Q1KMD3 747 aaKnown RBP22.16■■□□□ 1.14
CEP57-212ENST00000540830 ARAP1Q96P48 1450 aa22.12■■□□□ 1.13
CEP57-212ENST00000540830 HMGXB3Q12766 1538 aa22.06■■□□□ 1.12
CEP57-212ENST00000540830 MAP3K1Q13233 1512 aa22.06■■□□□ 1.12
CEP57-212ENST00000540830 YTHDC1Q96MU7 727 aaKnown RBP22.02■■□□□ 1.12
CEP57-212ENST00000540830 KIF27Q86VH2 1401 aa21.96■■□□□ 1.11
CEP57-212ENST00000540830 NCAPD3P42695 1498 aa21.95■■□□□ 1.1
CEP57-212ENST00000540830 PABPN1Q86U42 306 aaKnown RBP eCLIP21.91■■□□□ 1.1
CEP57-212ENST00000540830 CCNB3Q8WWL7 1395 aa21.91■■□□□ 1.1
CEP57-212ENST00000540830 CUX1P39880 1505 aa21.9■■□□□ 1.1
CEP57-212ENST00000540830 PRDM2Q13029 1718 aa21.87■■□□□ 1.09
CEP57-212ENST00000540830 ARHGAP35Q9NRY4 1499 aa21.86■■□□□ 1.09
CEP57-212ENST00000540830 CFTRP13569 1480 aa21.84■■□□□ 1.09
CEP57-212ENST00000540830 SUPT16HQ9Y5B9 1047 aaKnown RBP21.84■■□□□ 1.09
CEP57-212ENST00000540830 KANK4Q5T7N3 995 aaPredicted RBP21.81■■□□□ 1.08
CEP57-212ENST00000540830 TIMELESSQ9UNS1 1208 aa21.8■■□□□ 1.08
CEP57-212ENST00000540830 TIAM1Q13009 1591 aa21.79■■□□□ 1.08
CEP57-212ENST00000540830 MAPKBP1O60336 1514 aa21.77■■□□□ 1.08
CEP57-212ENST00000540830 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.71■■□□□ 1.07
CEP57-212ENST00000540830 CFAP43Q8NDM7 1665 aa21.7■■□□□ 1.06
CEP57-212ENST00000540830 SETD5Q9C0A6 1442 aa21.69■■□□□ 1.06
CEP57-212ENST00000540830 RAB3GAP2Q9H2M9 1393 aa21.69■■□□□ 1.06
CEP57-212ENST00000540830 LRRC9Q6ZRR7 1453 aa21.66■■□□□ 1.06
CEP57-212ENST00000540830 FHAD1B1AJZ9 1412 aa21.66■■□□□ 1.06
CEP57-212ENST00000540830 IGF1RP08069 1367 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms