RNA–Protein interactions for RNA: ENST00000540759.6

PIP4K2C-203, Transcript of phosphatidylinositol-5-phosphate 4-kinase type 2 gamma, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PIP4K2C, Length 2,876 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIP4K2C-203ENST00000540759 NISCHQ9Y2I1 1504 aa25.84■■□□□ 1.73
PIP4K2C-203ENST00000540759 SHROOM4Q9ULL8 1493 aa22.58■■□□□ 1.21
PIP4K2C-203ENST00000540759 DCAF8L2P0C7V8 631 aa22.54■■□□□ 1.2
PIP4K2C-203ENST00000540759 SUPT5HO00267 1087 aaKnown RBP21.92■■□□□ 1.1
PIP4K2C-203ENST00000540759 CCDC180Q9P1Z9 1646 aa21.76■■□□□ 1.07
PIP4K2C-203ENST00000540759 ZCCHC6Q5VYS8 1495 aaKnown RBP21.7■■□□□ 1.06
PIP4K2C-203ENST00000540759 ABCC9O60706 1549 aa21.39■■□□□ 1.01
PIP4K2C-203ENST00000540759 SCRIBQ14160 1630 aa20.99■□□□□ 0.95
PIP4K2C-203ENST00000540759 DCAF1Q9Y4B6 1507 aa20.79■□□□□ 0.92
PIP4K2C-203ENST00000540759 CHIC1Q5VXU3 224 aa20.73■□□□□ 0.91
PIP4K2C-203ENST00000540759 PABPN1Q86U42 306 aaKnown RBP eCLIP20.64■□□□□ 0.89
PIP4K2C-203ENST00000540759 EHMT2Q96KQ7 1210 aa20.61■□□□□ 0.89
PIP4K2C-203ENST00000540759 MYO15BQ96JP2 1530 aa20.58■□□□□ 0.88
PIP4K2C-203ENST00000540759 CECR2Q9BXF3 1484 aa20.53■□□□□ 0.88
PIP4K2C-203ENST00000540759 LOC105371045A0A1W2PR82 267 aa20.46■□□□□ 0.87
PIP4K2C-203ENST00000540759 RSF1Q96T23 1441 aaPredicted RBP20.45■□□□□ 0.86
PIP4K2C-203ENST00000540759 FAM9AQ8IZU1 332 aaPredicted RBP20.42■□□□□ 0.86
PIP4K2C-203ENST00000540759 NACADO15069 1562 aa20.39■□□□□ 0.85
PIP4K2C-203ENST00000540759 MROH2BQ7Z745 1585 aa20.27■□□□□ 0.84
PIP4K2C-203ENST00000540759 RB1CC1Q8TDY2 1594 aa20.25■□□□□ 0.83
PIP4K2C-203ENST00000540759 TRIM41Q8WV44 630 aa20.17■□□□□ 0.82
PIP4K2C-203ENST00000540759 WIZO95785 1651 aa20.14■□□□□ 0.81
PIP4K2C-203ENST00000540759 UNC13AQ9UPW8 1703 aa19.98■□□□□ 0.79
PIP4K2C-203ENST00000540759 PCGF6Q9BYE7 350 aa19.95■□□□□ 0.78
PIP4K2C-203ENST00000540759 PPARGC1BQ86YN6 1023 aaKnown RBP19.87■□□□□ 0.77
PIP4K2C-203ENST00000540759 BICRAQ9NZM4 1560 aa19.83■□□□□ 0.76
PIP4K2C-203ENST00000540759 BAZ1AQ9NRL2 1556 aaPredicted RBP19.8■□□□□ 0.76
PIP4K2C-203ENST00000540759 SMARCA4P51532 1647 aa19.74■□□□□ 0.75
PIP4K2C-203ENST00000540759 TTBK1Q5TCY1 1321 aaPredicted RBP19.73■□□□□ 0.75
PIP4K2C-203ENST00000540759 CCDC88BA6NC98 1476 aa19.72■□□□□ 0.75
PIP4K2C-203ENST00000540759 ABCC8Q09428 1581 aa19.7■□□□□ 0.74
PIP4K2C-203ENST00000540759 RANGAP1P46060 587 aaPredicted RBP19.6■□□□□ 0.73
PIP4K2C-203ENST00000540759 TOP2AP11388 1531 aaKnown RBP19.55■□□□□ 0.72
PIP4K2C-203ENST00000540759 SMARCA2P51531 1590 aa19.53■□□□□ 0.72
PIP4K2C-203ENST00000540759 SOGA1O94964 1423 aa19.46■□□□□ 0.71
PIP4K2C-203ENST00000540759 ATAD2BQ9ULI0 1458 aa19.45■□□□□ 0.7
PIP4K2C-203ENST00000540759 RUSC2Q8N2Y8 1516 aa19.45■□□□□ 0.7
PIP4K2C-203ENST00000540759 BAZ1BQ9UIG0 1483 aaKnown RBP19.42■□□□□ 0.7
PIP4K2C-203ENST00000540759 UBTFP17480 764 aaKnown RBP19.38■□□□□ 0.69
PIP4K2C-203ENST00000540759 EIF4G1Q04637 1599 aaKnown RBP19.33■□□□□ 0.68
PIP4K2C-203ENST00000540759 DNAJC5BQ9UF47 199 aa19.28■□□□□ 0.68
PIP4K2C-203ENST00000540759 HRCP23327 699 aa19.27■□□□□ 0.68
PIP4K2C-203ENST00000540759 TRIM26Q12899 539 aaPredicted RBP19.26■□□□□ 0.67
PIP4K2C-203ENST00000540759 WRNQ14191 1432 aaPredicted RBP eCLIP19.23■□□□□ 0.67
PIP4K2C-203ENST00000540759 CSRNP3Q8WYN3 585 aa19.23■□□□□ 0.67
PIP4K2C-203ENST00000540759 SYNJ1O43426 1573 aa19.14■□□□□ 0.65
PIP4K2C-203ENST00000540759 PEG3Q9GZU2 1588 aa19.11■□□□□ 0.65
PIP4K2C-203ENST00000540759 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.01■□□□□ 0.63
PIP4K2C-203ENST00000540759 CEP162Q5TB80 1403 aa19.01■□□□□ 0.63
PIP4K2C-203ENST00000540759 NCAPD3P42695 1498 aa19■□□□□ 0.63
PIP4K2C-203ENST00000540759 CC2D2AQ9P2K1 1620 aa18.95■□□□□ 0.62
PIP4K2C-203ENST00000540759 RAPGEF2Q9Y4G8 1499 aa18.91■□□□□ 0.62
PIP4K2C-203ENST00000540759 NESP48681 1621 aa18.91■□□□□ 0.62
PIP4K2C-203ENST00000540759 TNIKQ9UKE5 1360 aa18.84■□□□□ 0.61
PIP4K2C-203ENST00000540759 CUX1P39880 1505 aa18.84■□□□□ 0.61
PIP4K2C-203ENST00000540759 HNRNPUL2Q1KMD3 747 aaKnown RBP18.83■□□□□ 0.61
PIP4K2C-203ENST00000540759 P3H3Q8IVL6 736 aa18.83■□□□□ 0.6
PIP4K2C-203ENST00000540759 GOLGA3Q08378 1498 aa18.82■□□□□ 0.6
PIP4K2C-203ENST00000540759 HMGXB3Q12766 1538 aa18.81■□□□□ 0.6
PIP4K2C-203ENST00000540759 CADPSQ9ULU8 1353 aa18.79■□□□□ 0.6
PIP4K2C-203ENST00000540759 CFTRP13569 1480 aa18.79■□□□□ 0.6
PIP4K2C-203ENST00000540759 CCER1Q8TC90 406 aaPredicted RBP18.77■□□□□ 0.6
PIP4K2C-203ENST00000540759 ATP1B4Q9UN42 357 aaPredicted RBP18.75■□□□□ 0.59
PIP4K2C-203ENST00000540759 CLIP1P30622 1438 aa18.75■□□□□ 0.59
PIP4K2C-203ENST00000540759 TOP2BQ02880 1626 aa18.72■□□□□ 0.59
PIP4K2C-203ENST00000540759 EEA1Q15075 1411 aa18.72■□□□□ 0.59
PIP4K2C-203ENST00000540759 CEP164Q9UPV0 1460 aa18.71■□□□□ 0.59
PIP4K2C-203ENST00000540759 CUX2O14529 1486 aa18.7■□□□□ 0.58
PIP4K2C-203ENST00000540759 APLP2Q06481 763 aa18.69■□□□□ 0.58
PIP4K2C-203ENST00000540759 RAD54L2Q9Y4B4 1467 aa18.68■□□□□ 0.58
PIP4K2C-203ENST00000540759 ITGAEP38570 1179 aa18.66■□□□□ 0.58
PIP4K2C-203ENST00000540759 FANCD2Q9BXW9 1451 aa18.64■□□□□ 0.57
PIP4K2C-203ENST00000540759 KANK4Q5T7N3 995 aaPredicted RBP18.64■□□□□ 0.57
PIP4K2C-203ENST00000540759 FGD5Q6ZNL6 1462 aa18.62■□□□□ 0.57
PIP4K2C-203ENST00000540759 KIF27Q86VH2 1401 aa18.62■□□□□ 0.57
PIP4K2C-203ENST00000540759 TDRD9Q8NDG6 1382 aaKnown RBP18.58■□□□□ 0.56
PIP4K2C-203ENST00000540759 IGF1RP08069 1367 aa18.56■□□□□ 0.56
PIP4K2C-203ENST00000540759 BIVM-ERCC5R4GMW8 1640 aa18.55■□□□□ 0.56
PIP4K2C-203ENST00000540759 ARID3CA6NKF2 412 aa18.53■□□□□ 0.56
PIP4K2C-203ENST00000540759 KIF21BO75037 1637 aa18.51■□□□□ 0.55
PIP4K2C-203ENST00000540759 PRXQ9BXM0 1461 aa18.51■□□□□ 0.55
PIP4K2C-203ENST00000540759 CARMIL1Q5VZK9 1371 aa18.5■□□□□ 0.55
PIP4K2C-203ENST00000540759 ARAP1Q96P48 1450 aa18.48■□□□□ 0.55
PIP4K2C-203ENST00000540759 VPS8Q8N3P4 1428 aa18.47■□□□□ 0.55
PIP4K2C-203ENST00000540759 POLA1P09884 1462 aaPredicted RBP18.43■□□□□ 0.54
PIP4K2C-203ENST00000540759 TOPBP1Q92547 1522 aa18.42■□□□□ 0.54
PIP4K2C-203ENST00000540759 URB2Q14146 1524 aaKnown RBP18.4■□□□□ 0.54
PIP4K2C-203ENST00000540759 ZEB1P37275 1124 aaPredicted RBP18.37■□□□□ 0.53
PIP4K2C-203ENST00000540759 ARHGAP35Q9NRY4 1499 aa18.36■□□□□ 0.53
PIP4K2C-203ENST00000540759 FHOD3Q2V2M9 1422 aa18.32■□□□□ 0.52
PIP4K2C-203ENST00000540759 FBLN2P98095 1184 aa18.32■□□□□ 0.52
PIP4K2C-203ENST00000540759 AQRO60306 1485 aaKnown RBP eCLIP18.3■□□□□ 0.522e-6■■■□□ 19.1
PIP4K2C-203ENST00000540759 FAM50AQ14320 339 aaKnown RBP18.29■□□□□ 0.52
PIP4K2C-203ENST00000540759 PDS5BQ9NTI5 1447 aa18.27■□□□□ 0.52
PIP4K2C-203ENST00000540759 ERICH3Q5RHP9 1530 aa18.27■□□□□ 0.51
PIP4K2C-203ENST00000540759 DNMBPQ6XZF7 1577 aa18.26■□□□□ 0.51
PIP4K2C-203ENST00000540759 KIF21AQ7Z4S6 1674 aa18.26■□□□□ 0.51
PIP4K2C-203ENST00000540759 PRDM2Q13029 1718 aa18.23■□□□□ 0.51
PIP4K2C-203ENST00000540759 ABCA10Q8WWZ4 1543 aa18.18■□□□□ 0.5
PIP4K2C-203ENST00000540759 GAPVD1Q14C86 1478 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms