RNA–Protein interactions for RNA: ENST00000540643.5

SFI1-229, Transcript of SFI1 centrin binding protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SFI1, Length 4,226 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFI1-229ENST00000540643 PELP1Q8IZL8 1130 aaKnown RBP22.61■■□□□ 1.21
SFI1-229ENST00000540643 MYT1Q01538 1121 aa22.38■■□□□ 1.17
SFI1-229ENST00000540643 NISCHQ9Y2I1 1504 aa22.06■■□□□ 1.12
SFI1-229ENST00000540643 TTBK1Q5TCY1 1321 aaPredicted RBP20.79■□□□□ 0.92
SFI1-229ENST00000540643 PCGF6Q9BYE7 350 aa20.73■□□□□ 0.91
SFI1-229ENST00000540643 HRCP23327 699 aa20.66■□□□□ 0.9
SFI1-229ENST00000540643 ERICH6Q7L0X2 663 aa20.62■□□□□ 0.89
SFI1-229ENST00000540643 CENPBP07199 599 aaPredicted RBP20.58■□□□□ 0.89
SFI1-229ENST00000540643 PPARGC1BQ86YN6 1023 aaKnown RBP20.48■□□□□ 0.87
SFI1-229ENST00000540643 DCAF8L2P0C7V8 631 aa20.15■□□□□ 0.82
SFI1-229ENST00000540643 BCL11AQ9H165 835 aa20.08■□□□□ 0.81
SFI1-229ENST00000540643 YTHDC1Q96MU7 727 aaKnown RBP20.05■□□□□ 0.8
SFI1-229ENST00000540643 GTF3C3Q9Y5Q9 886 aa20.03■□□□□ 0.8
SFI1-229ENST00000540643 SCAF1Q9H7N4 1312 aaKnown RBP19.99■□□□□ 0.79
SFI1-229ENST00000540643 ZEB1P37275 1124 aaPredicted RBP19.91■□□□□ 0.78
SFI1-229ENST00000540643 SUPT5HO00267 1087 aaKnown RBP19.8■□□□□ 0.76
SFI1-229ENST00000540643 PRKCSHP14314 528 aaPredicted RBP19.8■□□□□ 0.76
SFI1-229ENST00000540643 CCER1Q8TC90 406 aaPredicted RBP19.74■□□□□ 0.75
SFI1-229ENST00000540643 ACIN1Q9UKV3 1341 aaKnown RBP19.68■□□□□ 0.74
SFI1-229ENST00000540643 EIF5BO60841 1220 aaKnown RBP19.5■□□□□ 0.71
SFI1-229ENST00000540643 SHROOM4Q9ULL8 1493 aa19.45■□□□□ 0.7
SFI1-229ENST00000540643 FAM9AQ8IZU1 332 aaPredicted RBP19.42■□□□□ 0.7
SFI1-229ENST00000540643 NEUROD1Q13562 356 aa19.41■□□□□ 0.7
SFI1-229ENST00000540643 ANP32EQ9BTT0 268 aa19.36■□□□□ 0.69
SFI1-229ENST00000540643 NEFLP07196 543 aa19.31■□□□□ 0.68
SFI1-229ENST00000540643 EHMT2Q96KQ7 1210 aa19.31■□□□□ 0.68
SFI1-229ENST00000540643 SLC24A1O60721 1099 aa19.27■□□□□ 0.68
SFI1-229ENST00000540643 DIEXFQ68CQ4 756 aaKnown RBP19.25■□□□□ 0.67
SFI1-229ENST00000540643 TRIM26Q12899 539 aaPredicted RBP19.22■□□□□ 0.67
SFI1-229ENST00000540643 RTL5Q5HYW3 569 aaPredicted RBP19.19■□□□□ 0.66
SFI1-229ENST00000540643 BCANQ96GW7 911 aa19.1■□□□□ 0.65
SFI1-229ENST00000540643 GLIPR1L2Q4G1C9 344 aa19.04■□□□□ 0.64
SFI1-229ENST00000540643 CSRNP3Q8WYN3 585 aa19.03■□□□□ 0.64
SFI1-229ENST00000540643 CCDC136Q96JN2 1154 aa18.85■□□□□ 0.61
SFI1-229ENST00000540643 RTN4Q9NQC3 1192 aaKnown RBP18.84■□□□□ 0.61
SFI1-229ENST00000540643 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.78■□□□□ 0.6
SFI1-229ENST00000540643 MYT1LQ9UL68 1186 aa18.76■□□□□ 0.59
SFI1-229ENST00000540643 NBR1Q14596 966 aa18.72■□□□□ 0.59
SFI1-229ENST00000540643 ANO8Q9HCE9 1232 aaPredicted RBP18.71■□□□□ 0.59
SFI1-229ENST00000540643 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.7■□□□□ 0.58
SFI1-229ENST00000540643 APLP2Q06481 763 aa18.68■□□□□ 0.58
SFI1-229ENST00000540643 RANGAP1P46060 587 aaPredicted RBP18.67■□□□□ 0.58
SFI1-229ENST00000540643 PODXL2Q9NZ53 605 aa18.63■□□□□ 0.57
SFI1-229ENST00000540643 LOC105371045A0A1W2PR82 267 aa18.6■□□□□ 0.57
SFI1-229ENST00000540643 CDK11AQ9UQ88 783 aaPredicted RBP18.57■□□□□ 0.56
SFI1-229ENST00000540643 DAXXQ9UER7 740 aaPredicted RBP18.57■□□□□ 0.56
SFI1-229ENST00000540643 DEKP35659 375 aaKnown RBP18.53■□□□□ 0.56
SFI1-229ENST00000540643 CCDC180Q9P1Z9 1646 aa18.5■□□□□ 0.55
SFI1-229ENST00000540643 PKNOX2Q96KN3 472 aa18.5■□□□□ 0.55
SFI1-229ENST00000540643 ZCCHC6Q5VYS8 1495 aaKnown RBP18.47■□□□□ 0.55
SFI1-229ENST00000540643 ZNF316A6NFI3 1004 aaPredicted RBP18.46■□□□□ 0.55
SFI1-229ENST00000540643 FKBP8Q14318 412 aa18.43■□□□□ 0.54
SFI1-229ENST00000540643 CLSPNQ9HAW4 1339 aa18.41■□□□□ 0.54
SFI1-229ENST00000540643 A0A0U1RQG5 324 aaPredicted RBP18.37■□□□□ 0.53
SFI1-229ENST00000540643 SALL2Q9Y467 1007 aaPredicted RBP18.32■□□□□ 0.52
SFI1-229ENST00000540643 ITGAEP38570 1179 aa18.31■□□□□ 0.52
SFI1-229ENST00000540643 TSHZ2Q9NRE2 1034 aa18.3■□□□□ 0.52
SFI1-229ENST00000540643 CHIC1Q5VXU3 224 aa18.29■□□□□ 0.52
SFI1-229ENST00000540643 VSIG10Q8N0Z9 540 aa18.29■□□□□ 0.52
SFI1-229ENST00000540643 ABCC9O60706 1549 aa18.28■□□□□ 0.52
SFI1-229ENST00000540643 ANP32AP39687 249 aaKnown RBP18.25■□□□□ 0.51
SFI1-229ENST00000540643 PLEKHG5O94827 1062 aa18.22■□□□□ 0.51
SFI1-229ENST00000540643 SUPT16HQ9Y5B9 1047 aaKnown RBP18.22■□□□□ 0.51
SFI1-229ENST00000540643 ERICH6BQ5W0A0 696 aa18.18■□□□□ 0.5
SFI1-229ENST00000540643 MIER1Q8N108 512 aa18.18■□□□□ 0.5
SFI1-229ENST00000540643 RBM19Q9Y4C8 960 aaKnown RBP18.16■□□□□ 0.5
SFI1-229ENST00000540643 NPM2Q86SE8 214 aaKnown RBP18.14■□□□□ 0.49
SFI1-229ENST00000540643 UBE2Q2Q8WVN8 375 aa18.12■□□□□ 0.49
SFI1-229ENST00000540643 ZBTB47Q9UFB7 747 aaPredicted RBP18.1■□□□□ 0.49
SFI1-229ENST00000540643 TIMELESSQ9UNS1 1208 aa18.09■□□□□ 0.49
SFI1-229ENST00000540643 NEFMP07197 916 aa18.07■□□□□ 0.48
SFI1-229ENST00000540643 AMER1Q5JTC6 1135 aaPredicted RBP18.04■□□□□ 0.48
SFI1-229ENST00000540643 NAP1L5Q96NT1 182 aaPredicted RBP18.02■□□□□ 0.47
SFI1-229ENST00000540643 ARXQ96QS3 562 aa17.98■□□□□ 0.47
SFI1-229ENST00000540643 HNRNPUL2Q1KMD3 747 aaKnown RBP17.93■□□□□ 0.46
SFI1-229ENST00000540643 TRIM41Q8WV44 630 aa17.92■□□□□ 0.46
SFI1-229ENST00000540643 ARID4BQ4LE39 1312 aaPredicted RBP17.91■□□□□ 0.46
SFI1-229ENST00000540643 NOP58Q9Y2X3 529 aaKnown RBP17.89■□□□□ 0.45
SFI1-229ENST00000540643 PDE4CQ08493 712 aa17.88■□□□□ 0.45
SFI1-229ENST00000540643 SCRIBQ14160 1630 aa17.85■□□□□ 0.45
SFI1-229ENST00000540643 IRX6P78412 446 aaPredicted RBP17.85■□□□□ 0.45
SFI1-229ENST00000540643 CDK11BP21127 795 aaKnown RBP17.83■□□□□ 0.44
SFI1-229ENST00000540643 IL27Q8NEV9 243 aa17.81■□□□□ 0.44
SFI1-229ENST00000540643 TNNT2P45379 298 aaPredicted RBP17.8■□□□□ 0.44
SFI1-229ENST00000540643 LAS1LQ9Y4W2 734 aaKnown RBP17.8■□□□□ 0.44
SFI1-229ENST00000540643 HSP90AA2PQ14568 343 aaPredicted RBP17.79■□□□□ 0.44
SFI1-229ENST00000540643 HSP90AA1P07900 732 aaKnown RBP17.78■□□□□ 0.44
SFI1-229ENST00000540643 DCAF1Q9Y4B6 1507 aa17.77■□□□□ 0.44
SFI1-229ENST00000540643 TRIM52Q96A61 297 aa17.76■□□□□ 0.43
SFI1-229ENST00000540643 CNGB1Q14028 1251 aaPredicted RBP17.74■□□□□ 0.43
SFI1-229ENST00000540643 RSPH6AQ9H0K4 717 aa17.73■□□□□ 0.43
SFI1-229ENST00000540643 PABPN1Q86U42 306 aaKnown RBP eCLIP17.71■□□□□ 0.433e-7■■■□□ 16.2
SFI1-229ENST00000540643 ZMYND15Q9H091 742 aa17.64■□□□□ 0.41
SFI1-229ENST00000540643 ANP32CO43423 234 aa17.62■□□□□ 0.41
SFI1-229ENST00000540643 NCLP19338 710 aaKnown RBP17.62■□□□□ 0.41
SFI1-229ENST00000540643 ARID3AQ99856 593 aa17.59■□□□□ 0.41
SFI1-229ENST00000540643 PPM1GO15355 546 aaPredicted RBP17.57■□□□□ 0.4
SFI1-229ENST00000540643 PNNQ9H307 717 aaKnown RBP17.57■□□□□ 0.4
SFI1-229ENST00000540643 PDIA4P13667 645 aaKnown RBP17.56■□□□□ 0.4
SFI1-229ENST00000540643 HNRNPUQ00839 825 aaKnown RBP eCLIP17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms