RNA–Protein interactions for RNA: ENST00000540114.5

PPFIBP1-210, Transcript of PPFIA binding protein 1, humanhuman

TSL 2

Gene PPFIBP1, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIBP1-210ENST00000540114 NISCHQ9Y2I1 1504 aa32.4■■■□□ 2.78
PPFIBP1-210ENST00000540114 CCDC180Q9P1Z9 1646 aa27.92■■■□□ 2.06
PPFIBP1-210ENST00000540114 ZCCHC6Q5VYS8 1495 aaKnown RBP27.24■■□□□ 1.95
PPFIBP1-210ENST00000540114 DCAF8L2P0C7V8 631 aa27.14■■□□□ 1.94
PPFIBP1-210ENST00000540114 SHROOM4Q9ULL8 1493 aa27.05■■□□□ 1.92
PPFIBP1-210ENST00000540114 DCAF1Q9Y4B6 1507 aa26.61■■□□□ 1.85
PPFIBP1-210ENST00000540114 ABCC9O60706 1549 aa26.49■■□□□ 1.83
PPFIBP1-210ENST00000540114 SUPT5HO00267 1087 aaKnown RBP26.21■■□□□ 1.79
PPFIBP1-210ENST00000540114 MYO15BQ96JP2 1530 aa26.13■■□□□ 1.77
PPFIBP1-210ENST00000540114 NACADO15069 1562 aa26.01■■□□□ 1.75
PPFIBP1-210ENST00000540114 SCRIBQ14160 1630 aa26.01■■□□□ 1.75
PPFIBP1-210ENST00000540114 RB1CC1Q8TDY2 1594 aa25.75■■□□□ 1.71
PPFIBP1-210ENST00000540114 RSF1Q96T23 1441 aaPredicted RBP25.34■■□□□ 1.65
PPFIBP1-210ENST00000540114 CECR2Q9BXF3 1484 aa25.29■■□□□ 1.64
PPFIBP1-210ENST00000540114 UNC13AQ9UPW8 1703 aa25.26■■□□□ 1.63
PPFIBP1-210ENST00000540114 PABPN1Q86U42 306 aaKnown RBP eCLIP25.18■■□□□ 1.62
PPFIBP1-210ENST00000540114 MROH2BQ7Z745 1585 aa25.13■■□□□ 1.61
PPFIBP1-210ENST00000540114 CHIC1Q5VXU3 224 aa25.1■■□□□ 1.61
PPFIBP1-210ENST00000540114 BICRAQ9NZM4 1560 aa25■■□□□ 1.59
PPFIBP1-210ENST00000540114 BAZ1AQ9NRL2 1556 aaPredicted RBP24.96■■□□□ 1.59
PPFIBP1-210ENST00000540114 WIZO95785 1651 aa24.95■■□□□ 1.58
PPFIBP1-210ENST00000540114 SMARCA4P51532 1647 aa24.82■■□□□ 1.56
PPFIBP1-210ENST00000540114 TOP2AP11388 1531 aaKnown RBP24.58■■□□□ 1.52
PPFIBP1-210ENST00000540114 TRIM41Q8WV44 630 aa24.51■■□□□ 1.51
PPFIBP1-210ENST00000540114 CCDC88BA6NC98 1476 aa24.45■■□□□ 1.5
PPFIBP1-210ENST00000540114 SMARCA2P51531 1590 aa24.4■■□□□ 1.5
PPFIBP1-210ENST00000540114 PEG3Q9GZU2 1588 aa24.39■■□□□ 1.49
PPFIBP1-210ENST00000540114 ATAD2BQ9ULI0 1458 aa24.39■■□□□ 1.49
PPFIBP1-210ENST00000540114 LOC105371045A0A1W2PR82 267 aa24.31■■□□□ 1.48
PPFIBP1-210ENST00000540114 BAZ1BQ9UIG0 1483 aaKnown RBP24.3■■□□□ 1.48
PPFIBP1-210ENST00000540114 EIF4G1Q04637 1599 aaKnown RBP24.25■■□□□ 1.47
PPFIBP1-210ENST00000540114 FAM9AQ8IZU1 332 aaPredicted RBP24.24■■□□□ 1.47
PPFIBP1-210ENST00000540114 ABCC8Q09428 1581 aa24.11■■□□□ 1.45
PPFIBP1-210ENST00000540114 NCAPD3P42695 1498 aa24.06■■□□□ 1.44
PPFIBP1-210ENST00000540114 EHMT2Q96KQ7 1210 aa24.04■■□□□ 1.44
PPFIBP1-210ENST00000540114 HRCP23327 699 aa23.98■■□□□ 1.43
PPFIBP1-210ENST00000540114 HMGXB3Q12766 1538 aa23.98■■□□□ 1.43
PPFIBP1-210ENST00000540114 PCGF6Q9BYE7 350 aa23.86■■□□□ 1.41
PPFIBP1-210ENST00000540114 WRNQ14191 1432 aaPredicted RBP eCLIP23.85■■□□□ 1.41
PPFIBP1-210ENST00000540114 CC2D2AQ9P2K1 1620 aa23.85■■□□□ 1.41
PPFIBP1-210ENST00000540114 SOGA1O94964 1423 aa23.75■■□□□ 1.39
PPFIBP1-210ENST00000540114 SYNJ1O43426 1573 aa23.71■■□□□ 1.39
PPFIBP1-210ENST00000540114 RUSC2Q8N2Y8 1516 aa23.66■■□□□ 1.38
PPFIBP1-210ENST00000540114 CFTRP13569 1480 aa23.64■■□□□ 1.38
PPFIBP1-210ENST00000540114 CSRNP3Q8WYN3 585 aa23.62■■□□□ 1.37
PPFIBP1-210ENST00000540114 EEA1Q15075 1411 aa23.56■■□□□ 1.36
PPFIBP1-210ENST00000540114 CADPSQ9ULU8 1353 aa23.56■■□□□ 1.36
PPFIBP1-210ENST00000540114 TOP2BQ02880 1626 aa23.51■■□□□ 1.35
PPFIBP1-210ENST00000540114 PPARGC1BQ86YN6 1023 aaKnown RBP23.51■■□□□ 1.35
PPFIBP1-210ENST00000540114 UBTFP17480 764 aaKnown RBP23.47■■□□□ 1.35
PPFIBP1-210ENST00000540114 CUX1P39880 1505 aa23.44■■□□□ 1.34
PPFIBP1-210ENST00000540114 BIVM-ERCC5R4GMW8 1640 aa23.43■■□□□ 1.34
PPFIBP1-210ENST00000540114 DNAJC5BQ9UF47 199 aa23.41■■□□□ 1.34
PPFIBP1-210ENST00000540114 PRDM2Q13029 1718 aa23.39■■□□□ 1.33
PPFIBP1-210ENST00000540114 GOLGA3Q08378 1498 aa23.34■■□□□ 1.33
PPFIBP1-210ENST00000540114 NESP48681 1621 aa23.34■■□□□ 1.33
PPFIBP1-210ENST00000540114 TNIKQ9UKE5 1360 aa23.34■■□□□ 1.33
PPFIBP1-210ENST00000540114 TRIM26Q12899 539 aaPredicted RBP23.31■■□□□ 1.32
PPFIBP1-210ENST00000540114 FANCD2Q9BXW9 1451 aa23.31■■□□□ 1.32
PPFIBP1-210ENST00000540114 CEP162Q5TB80 1403 aa23.3■■□□□ 1.32
PPFIBP1-210ENST00000540114 CEP164Q9UPV0 1460 aa23.29■■□□□ 1.32
PPFIBP1-210ENST00000540114 KIF21BO75037 1637 aa23.22■■□□□ 1.31
PPFIBP1-210ENST00000540114 RAPGEF2Q9Y4G8 1499 aa23.21■■□□□ 1.31
PPFIBP1-210ENST00000540114 KIF27Q86VH2 1401 aa23.21■■□□□ 1.31
PPFIBP1-210ENST00000540114 RANGAP1P46060 587 aaPredicted RBP23.18■■□□□ 1.3
PPFIBP1-210ENST00000540114 FGD5Q6ZNL6 1462 aa23.17■■□□□ 1.3
PPFIBP1-210ENST00000540114 LAMC3Q9Y6N6 1575 aa23.16■■□□□ 1.3
PPFIBP1-210ENST00000540114 CUX2O14529 1486 aa23.13■■□□□ 1.29
PPFIBP1-210ENST00000540114 PRXQ9BXM0 1461 aa23.08■■□□□ 1.29
PPFIBP1-210ENST00000540114 PDS5BQ9NTI5 1447 aa23.07■■□□□ 1.28
PPFIBP1-210ENST00000540114 TOPBP1Q92547 1522 aa23.06■■□□□ 1.28
PPFIBP1-210ENST00000540114 TTBK1Q5TCY1 1321 aaPredicted RBP23.06■■□□□ 1.28
PPFIBP1-210ENST00000540114 DNMBPQ6XZF7 1577 aa23.06■■□□□ 1.28
PPFIBP1-210ENST00000540114 CLIP1P30622 1438 aa23.05■■□□□ 1.28
PPFIBP1-210ENST00000540114 RAD54L2Q9Y4B4 1467 aa23.02■■□□□ 1.28
PPFIBP1-210ENST00000540114 IGF1RP08069 1367 aa23■■□□□ 1.27
PPFIBP1-210ENST00000540114 ERICH3Q5RHP9 1530 aa23■■□□□ 1.27
PPFIBP1-210ENST00000540114 POLA1P09884 1462 aaPredicted RBP23■■□□□ 1.27
PPFIBP1-210ENST00000540114 URB2Q14146 1524 aaKnown RBP22.98■■□□□ 1.27
PPFIBP1-210ENST00000540114 KIF21AQ7Z4S6 1674 aa22.93■■□□□ 1.26
PPFIBP1-210ENST00000540114 CARMIL1Q5VZK9 1371 aa22.91■■□□□ 1.26
PPFIBP1-210ENST00000540114 ABCA10Q8WWZ4 1543 aa22.88■■□□□ 1.25
PPFIBP1-210ENST00000540114 ZEB1P37275 1124 aaPredicted RBP22.87■■□□□ 1.25
PPFIBP1-210ENST00000540114 VPS8Q8N3P4 1428 aa22.83■■□□□ 1.25
PPFIBP1-210ENST00000540114 TDRD9Q8NDG6 1382 aaKnown RBP22.82■■□□□ 1.24
PPFIBP1-210ENST00000540114 APLP2Q06481 763 aa22.81■■□□□ 1.24
PPFIBP1-210ENST00000540114 ARAP1Q96P48 1450 aa22.72■■□□□ 1.23
PPFIBP1-210ENST00000540114 MRC2Q9UBG0 1479 aa22.72■■□□□ 1.23
PPFIBP1-210ENST00000540114 GAPVD1Q14C86 1478 aa22.69■■□□□ 1.22
PPFIBP1-210ENST00000540114 WDR97A6NE52 1622 aa22.69■■□□□ 1.22
PPFIBP1-210ENST00000540114 ARHGAP35Q9NRY4 1499 aa22.67■■□□□ 1.22
PPFIBP1-210ENST00000540114 ERCC6Q03468 1493 aa22.66■■□□□ 1.22
PPFIBP1-210ENST00000540114 ABCA5Q8WWZ7 1642 aa22.63■■□□□ 1.21
PPFIBP1-210ENST00000540114 CUL7Q14999 1698 aa22.63■■□□□ 1.21
PPFIBP1-210ENST00000540114 P3H3Q8IVL6 736 aa22.62■■□□□ 1.21
PPFIBP1-210ENST00000540114 TARBP1Q13395 1621 aaKnown RBP22.62■■□□□ 1.21
PPFIBP1-210ENST00000540114 AQRO60306 1485 aaKnown RBP eCLIP22.59■■□□□ 1.21
PPFIBP1-210ENST00000540114 KANK4Q5T7N3 995 aaPredicted RBP22.53■■□□□ 1.2
PPFIBP1-210ENST00000540114 WDR62O43379 1518 aa22.53■■□□□ 1.2
PPFIBP1-210ENST00000540114 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms