RNA–Protein interactions for RNA: ENST00000539778.6

CMIP-203, Transcript of c-Maf inducing protein, humanhuman

TSL 1 (best) BASIC

Gene CMIP, Length 3,937 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMIP-203ENST00000539778 NISCHQ9Y2I1 1504 aa25.87■■□□□ 1.73
CMIP-203ENST00000539778 CCDC180Q9P1Z9 1646 aa22.31■■□□□ 1.16
CMIP-203ENST00000539778 ZCCHC6Q5VYS8 1495 aaKnown RBP21.93■■□□□ 1.1
CMIP-203ENST00000539778 DCAF1Q9Y4B6 1507 aa21.48■■□□□ 1.03
CMIP-203ENST00000539778 SHROOM4Q9ULL8 1493 aa21.4■■□□□ 1.02
CMIP-203ENST00000539778 MYO15BQ96JP2 1530 aa20.94■□□□□ 0.94
CMIP-203ENST00000539778 SUPT5HO00267 1087 aaKnown RBP20.89■□□□□ 0.93
CMIP-203ENST00000539778 ABCC9O60706 1549 aa20.71■□□□□ 0.91
CMIP-203ENST00000539778 DCAF8L2P0C7V8 631 aa20.7■□□□□ 0.9
CMIP-203ENST00000539778 CHIC1Q5VXU3 224 aa20.55■□□□□ 0.88
CMIP-203ENST00000539778 NACADO15069 1562 aa20.5■□□□□ 0.87
CMIP-203ENST00000539778 SCRIBQ14160 1630 aa20.49■□□□□ 0.87
CMIP-203ENST00000539778 RSF1Q96T23 1441 aaPredicted RBP20.33■□□□□ 0.84
CMIP-203ENST00000539778 RB1CC1Q8TDY2 1594 aa20.22■□□□□ 0.83
CMIP-203ENST00000539778 PELP1Q8IZL8 1130 aaKnown RBP20.03■□□□□ 0.8
CMIP-203ENST00000539778 MROH2BQ7Z745 1585 aa20.02■□□□□ 0.8
CMIP-203ENST00000539778 CECR2Q9BXF3 1484 aa20.02■□□□□ 0.79
CMIP-203ENST00000539778 UNC13AQ9UPW8 1703 aa19.95■□□□□ 0.78
CMIP-203ENST00000539778 BAZ1AQ9NRL2 1556 aaPredicted RBP19.95■□□□□ 0.78
CMIP-203ENST00000539778 WIZO95785 1651 aa19.92■□□□□ 0.78
CMIP-203ENST00000539778 EIF4G1Q04637 1599 aaKnown RBP19.89■□□□□ 0.77
CMIP-203ENST00000539778 SMARCA4P51532 1647 aa19.76■□□□□ 0.75
CMIP-203ENST00000539778 TOP2AP11388 1531 aaKnown RBP19.73■□□□□ 0.75
CMIP-203ENST00000539778 LOC105371045A0A1W2PR82 267 aa19.72■□□□□ 0.75
CMIP-203ENST00000539778 HRCP23327 699 aa19.71■□□□□ 0.75
CMIP-203ENST00000539778 PPARGC1BQ86YN6 1023 aaKnown RBP19.7■□□□□ 0.74
CMIP-203ENST00000539778 BICRAQ9NZM4 1560 aa19.63■□□□□ 0.73
CMIP-203ENST00000539778 DNAJC5BQ9UF47 199 aa19.63■□□□□ 0.73
CMIP-203ENST00000539778 TRIM41Q8WV44 630 aa19.61■□□□□ 0.73
CMIP-203ENST00000539778 SMARCA2P51531 1590 aa19.59■□□□□ 0.73
CMIP-203ENST00000539778 PEG3Q9GZU2 1588 aa19.56■□□□□ 0.72
CMIP-203ENST00000539778 PCGF6Q9BYE7 350 aa19.55■□□□□ 0.72
CMIP-203ENST00000539778 PABPN1Q86U42 306 aaKnown RBP eCLIP19.5■□□□□ 0.71
CMIP-203ENST00000539778 CCDC88BA6NC98 1476 aa19.49■□□□□ 0.71
CMIP-203ENST00000539778 SCAF1Q9H7N4 1312 aaKnown RBP19.47■□□□□ 0.71
CMIP-203ENST00000539778 TRIM26Q12899 539 aaPredicted RBP19.43■□□□□ 0.7
CMIP-203ENST00000539778 MYT1Q01538 1121 aa19.34■□□□□ 0.69
CMIP-203ENST00000539778 ABCC8Q09428 1581 aa19.32■□□□□ 0.68
CMIP-203ENST00000539778 DNAJC5Q9H3Z4 198 aa19.25■□□□□ 0.67
CMIP-203ENST00000539778 FAM9AQ8IZU1 332 aaPredicted RBP19.21■□□□□ 0.67
CMIP-203ENST00000539778 EEA1Q15075 1411 aa19.19■□□□□ 0.66
CMIP-203ENST00000539778 ATAD2BQ9ULI0 1458 aa19.19■□□□□ 0.66
CMIP-203ENST00000539778 WRNQ14191 1432 aaPredicted RBP eCLIP19.13■□□□□ 0.65
CMIP-203ENST00000539778 SOGA1O94964 1423 aa19.08■□□□□ 0.64
CMIP-203ENST00000539778 SYNJ1O43426 1573 aa19.07■□□□□ 0.64
CMIP-203ENST00000539778 BAZ1BQ9UIG0 1483 aaKnown RBP19.06■□□□□ 0.64
CMIP-203ENST00000539778 PRKCSHP14314 528 aaPredicted RBP19.05■□□□□ 0.64
CMIP-203ENST00000539778 TNIKQ9UKE5 1360 aa19.04■□□□□ 0.64
CMIP-203ENST00000539778 KIF21BO75037 1637 aa19.02■□□□□ 0.63
CMIP-203ENST00000539778 ZEB1P37275 1124 aaPredicted RBP19.01■□□□□ 0.63
CMIP-203ENST00000539778 HMGXB3Q12766 1538 aa19■□□□□ 0.63
CMIP-203ENST00000539778 RUSC2Q8N2Y8 1516 aa19■□□□□ 0.63
CMIP-203ENST00000539778 CEP162Q5TB80 1403 aa18.98■□□□□ 0.63
CMIP-203ENST00000539778 BIVM-ERCC5R4GMW8 1640 aa18.96■□□□□ 0.63
CMIP-203ENST00000539778 GOLGA3Q08378 1498 aa18.95■□□□□ 0.62
CMIP-203ENST00000539778 TOP2BQ02880 1626 aa18.93■□□□□ 0.62
CMIP-203ENST00000539778 AEBP2Q6ZN18 517 aaPredicted RBP18.91■□□□□ 0.62
CMIP-203ENST00000539778 NCAPD3P42695 1498 aa18.9■□□□□ 0.62
CMIP-203ENST00000539778 CSRNP3Q8WYN3 585 aa18.9■□□□□ 0.62
CMIP-203ENST00000539778 CEP164Q9UPV0 1460 aa18.87■□□□□ 0.61
CMIP-203ENST00000539778 EHMT2Q96KQ7 1210 aa18.85■□□□□ 0.61
CMIP-203ENST00000539778 PRDM2Q13029 1718 aa18.82■□□□□ 0.6
CMIP-203ENST00000539778 BCL11AQ9H165 835 aa18.81■□□□□ 0.6
CMIP-203ENST00000539778 ERICH3Q5RHP9 1530 aa18.72■□□□□ 0.59
CMIP-203ENST00000539778 CFTRP13569 1480 aa18.7■□□□□ 0.58
CMIP-203ENST00000539778 CUX1P39880 1505 aa18.68■□□□□ 0.58
CMIP-203ENST00000539778 RAPGEF2Q9Y4G8 1499 aa18.67■□□□□ 0.58
CMIP-203ENST00000539778 PRXQ9BXM0 1461 aa18.65■□□□□ 0.58
CMIP-203ENST00000539778 VPS8Q8N3P4 1428 aa18.62■□□□□ 0.57
CMIP-203ENST00000539778 CLIP1P30622 1438 aa18.62■□□□□ 0.57
CMIP-203ENST00000539778 UBTFP17480 764 aaKnown RBP18.6■□□□□ 0.57
CMIP-203ENST00000539778 NEUROD1Q13562 356 aa18.5■□□□□ 0.55
CMIP-203ENST00000539778 ARAP1Q96P48 1450 aa18.48■□□□□ 0.55
CMIP-203ENST00000539778 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.47■□□□□ 0.55
CMIP-203ENST00000539778 KIF27Q86VH2 1401 aa18.46■□□□□ 0.55
CMIP-203ENST00000539778 TTBK1Q5TCY1 1321 aaPredicted RBP18.43■□□□□ 0.54
CMIP-203ENST00000539778 CCER1Q8TC90 406 aaPredicted RBP18.42■□□□□ 0.54
CMIP-203ENST00000539778 GTF3C3Q9Y5Q9 886 aa18.42■□□□□ 0.54
CMIP-203ENST00000539778 CC2D2AQ9P2K1 1620 aa18.41■□□□□ 0.54
CMIP-203ENST00000539778 TRHP20396 242 aaPredicted RBP18.4■□□□□ 0.54
CMIP-203ENST00000539778 CADPSQ9ULU8 1353 aa18.4■□□□□ 0.54
CMIP-203ENST00000539778 ERCC6Q03468 1493 aa18.38■□□□□ 0.53
CMIP-203ENST00000539778 ACIN1Q9UKV3 1341 aaKnown RBP18.34■□□□□ 0.53
CMIP-203ENST00000539778 ARHGAP35Q9NRY4 1499 aa18.31■□□□□ 0.52
CMIP-203ENST00000539778 FGD5Q6ZNL6 1462 aa18.29■□□□□ 0.52
CMIP-203ENST00000539778 MAP3K1Q13233 1512 aa18.28■□□□□ 0.52
CMIP-203ENST00000539778 IGF1RP08069 1367 aa18.27■□□□□ 0.52
CMIP-203ENST00000539778 DNMBPQ6XZF7 1577 aa18.27■□□□□ 0.52
CMIP-203ENST00000539778 RRBP1Q9P2E9 1410 aaKnown RBP18.25■□□□□ 0.51
CMIP-203ENST00000539778 CUX2O14529 1486 aa18.25■□□□□ 0.51
CMIP-203ENST00000539778 WDR97A6NE52 1622 aa18.22■□□□□ 0.51
CMIP-203ENST00000539778 FANCD2Q9BXW9 1451 aa18.22■□□□□ 0.51
CMIP-203ENST00000539778 ABCA10Q8WWZ4 1543 aa18.19■□□□□ 0.5
CMIP-203ENST00000539778 CFAP43Q8NDM7 1665 aa18.17■□□□□ 0.5
CMIP-203ENST00000539778 CUL7Q14999 1698 aa18.16■□□□□ 0.5
CMIP-203ENST00000539778 TIAM1Q13009 1591 aa18.16■□□□□ 0.5
CMIP-203ENST00000539778 APLP2Q06481 763 aa18.16■□□□□ 0.5
CMIP-203ENST00000539778 LAMC3Q9Y6N6 1575 aa18.16■□□□□ 0.5
CMIP-203ENST00000539778 TOPBP1Q92547 1522 aa18.15■□□□□ 0.5
CMIP-203ENST00000539778 CARMIL1Q5VZK9 1371 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms