RNA–Protein interactions for RNA: ENST00000539552.1

AC055720.1-201, humanhuman

TSL 5 BASIC

Gene AC055720.1, Length 475 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055720.1-201ENST00000539552 AEBP2Q6ZN18 517 aaPredicted RBP19.99■□□□□ 0.79
AC055720.1-201ENST00000539552 CHIC1Q5VXU3 224 aa18.94■□□□□ 0.62
AC055720.1-201ENST00000539552 SENP3Q9H4L4 574 aaPredicted RBP17.31■□□□□ 0.36
AC055720.1-201ENST00000539552 PHF23Q9BUL5 403 aaPredicted RBP16.97■□□□□ 0.31
AC055720.1-201ENST00000539552 FOXD1Q16676 465 aa16.05■□□□□ 0.16
AC055720.1-201ENST00000539552 POTEDQ86YR6 584 aa15.37■□□□□ 0.05
AC055720.1-201ENST00000539552 MSH5O43196 834 aa15.31■□□□□ 0.04
AC055720.1-201ENST00000539552 PIAS4Q8N2W9 510 aaPredicted RBP15.05■□□□□ -0
AC055720.1-201ENST00000539552 PLPPR3Q6T4P5 718 aa14.96□□□□□ -0.01
AC055720.1-201ENST00000539552 ADRA2BP18089 450 aa14.69□□□□□ -0.06
AC055720.1-201ENST00000539552 PPP6R1Q9UPN7 881 aa14.68□□□□□ -0.06
AC055720.1-201ENST00000539552 SCAF1Q9H7N4 1312 aaKnown RBP13.66□□□□□ -0.22
AC055720.1-201ENST00000539552 DMRT2Q9Y5R5 561 aa13.6□□□□□ -0.23
AC055720.1-201ENST00000539552 MAPK8IP2Q13387 824 aaPredicted RBP13.56□□□□□ -0.24
AC055720.1-201ENST00000539552 CACNB1Q02641 598 aaPredicted RBP13.36□□□□□ -0.27
AC055720.1-201ENST00000539552 DCAF8L1A6NGE4 600 aa13.26□□□□□ -0.29
AC055720.1-201ENST00000539552 PPP4R3CPQ6ZMV5 832 aa13.01□□□□□ -0.33
AC055720.1-201ENST00000539552 HOXD11P31277 338 aaPredicted RBP12.95□□□□□ -0.34
AC055720.1-201ENST00000539552 RNF39Q9H2S5 420 aa12.91□□□□□ -0.34
AC055720.1-201ENST00000539552 CNKSR2Q8WXI2 1034 aa12.89□□□□□ -0.35
AC055720.1-201ENST00000539552 RNF216Q9NWF9 866 aaPredicted RBP12.83□□□□□ -0.36
AC055720.1-201ENST00000539552 C1QBPQ07021 282 aaKnown RBP12.79□□□□□ -0.36
AC055720.1-201ENST00000539552 DNAJC5BQ9UF47 199 aa12.59□□□□□ -0.39
AC055720.1-201ENST00000539552 NCBP3Q53F19 620 aaKnown RBP12.56□□□□□ -0.4
AC055720.1-201ENST00000539552 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.5□□□□□ -0.41
AC055720.1-201ENST00000539552 NPM3O75607 178 aaKnown RBP12.19□□□□□ -0.46
AC055720.1-201ENST00000539552 CAPN15O75808 1086 aa12.12□□□□□ -0.47
AC055720.1-201ENST00000539552 POTEHQ6S545 545 aa12.05□□□□□ -0.48
AC055720.1-201ENST00000539552 U3KPZ7 1027 aaPredicted RBP12.04□□□□□ -0.48
AC055720.1-201ENST00000539552 DSG3P32926 999 aa11.98□□□□□ -0.49
AC055720.1-201ENST00000539552 SPINK5Q9NQ38 1064 aaPredicted RBP11.97□□□□□ -0.49
AC055720.1-201ENST00000539552 APLP2Q06481 763 aa11.94□□□□□ -0.5
AC055720.1-201ENST00000539552 TRHP20396 242 aaPredicted RBP11.84□□□□□ -0.51
AC055720.1-201ENST00000539552 ZNF219Q9P2Y4 722 aaPredicted RBP11.82□□□□□ -0.52
AC055720.1-201ENST00000539552 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.8□□□□□ -0.52
AC055720.1-201ENST00000539552 HNRNPUL2Q1KMD3 747 aaKnown RBP11.8□□□□□ -0.52
AC055720.1-201ENST00000539552 ABCB7O75027 752 aa11.74□□□□□ -0.53
AC055720.1-201ENST00000539552 SAMD1Q6SPF0 538 aaPredicted RBP11.66□□□□□ -0.54
AC055720.1-201ENST00000539552 SLC4A2P04920 1241 aa11.65□□□□□ -0.54
AC055720.1-201ENST00000539552 KCNA4P22459 653 aa11.65□□□□□ -0.54
AC055720.1-201ENST00000539552 RBM42Q9BTD8 480 aaKnown RBP11.62□□□□□ -0.55
AC055720.1-201ENST00000539552 MYCNP04198 464 aaPredicted RBP11.39□□□□□ -0.59
AC055720.1-201ENST00000539552 POLA2Q14181 598 aa11.39□□□□□ -0.59
AC055720.1-201ENST00000539552 CHRDL2Q6WN34 429 aa11.39□□□□□ -0.59
AC055720.1-201ENST00000539552 ZBTB12Q9Y330 459 aaPredicted RBP11.24□□□□□ -0.61
AC055720.1-201ENST00000539552 AKT1S1Q96B36 256 aa11.2□□□□□ -0.62
AC055720.1-201ENST00000539552 SP7Q8TDD2 431 aaPredicted RBP11.14□□□□□ -0.63
AC055720.1-201ENST00000539552 FOXD4L1Q9NU39 408 aa11.06□□□□□ -0.64
AC055720.1-201ENST00000539552 REM2Q8IYK8 340 aaPredicted RBP11.05□□□□□ -0.64
AC055720.1-201ENST00000539552 SLC4A1APQ9BWU0 796 aaKnown RBP11.04□□□□□ -0.64
AC055720.1-201ENST00000539552 HAX1O00165 279 aa11.02□□□□□ -0.65
AC055720.1-201ENST00000539552 OSCARQ8IYS5 282 aa11.01□□□□□ -0.65
AC055720.1-201ENST00000539552 PIP4P2Q8N4L2 257 aa11.01□□□□□ -0.65
AC055720.1-201ENST00000539552 ATF5Q9Y2D1 282 aaPredicted RBP10.97□□□□□ -0.65
AC055720.1-201ENST00000539552 PITPNM1O00562 1244 aa10.92□□□□□ -0.66
AC055720.1-201ENST00000539552 FXR2P51116 673 aaKnown RBP eCLIP10.87□□□□□ -0.67
AC055720.1-201ENST00000539552 FBLN2P98095 1184 aa10.84□□□□□ -0.67
AC055720.1-201ENST00000539552 SPDYE2BA6NHP3 402 aa10.79□□□□□ -0.68
AC055720.1-201ENST00000539552 SPDYE6P0CI01 402 aa10.79□□□□□ -0.68
AC055720.1-201ENST00000539552 SPDYE2Q495Y8 402 aa10.79□□□□□ -0.68
AC055720.1-201ENST00000539552 ATXN8OSP0DMR3 200 aa10.76□□□□□ -0.69
AC055720.1-201ENST00000539552 CLEC11AQ9Y240 323 aa10.75□□□□□ -0.69
AC055720.1-201ENST00000539552 SPDYE1Q8NFV5 336 aaPredicted RBP10.72□□□□□ -0.69
AC055720.1-201ENST00000539552 PRKAR2AP13861 404 aaKnown RBP10.7□□□□□ -0.7
AC055720.1-201ENST00000539552 ZNF692Q9BU19 519 aaPredicted RBP10.64□□□□□ -0.71
AC055720.1-201ENST00000539552 EVX2Q03828 476 aa10.63□□□□□ -0.71
AC055720.1-201ENST00000539552 ZBTB22O15209 634 aa10.6□□□□□ -0.71
AC055720.1-201ENST00000539552 C19orf67A6NJJ6 358 aa10.54□□□□□ -0.72
AC055720.1-201ENST00000539552 PRR29P0C7W0 189 aa10.51□□□□□ -0.73
AC055720.1-201ENST00000539552 SSUH2Q9Y2M2 353 aa10.51□□□□□ -0.73
AC055720.1-201ENST00000539552 GABBR2O75899 941 aa10.49□□□□□ -0.73
AC055720.1-201ENST00000539552 LHX8Q68G74 356 aa10.46□□□□□ -0.73
AC055720.1-201ENST00000539552 CHADLQ6NUI6 762 aa10.46□□□□□ -0.73
AC055720.1-201ENST00000539552 MKRN4PQ13434 485 aaPredicted RBP10.45□□□□□ -0.74
AC055720.1-201ENST00000539552 PABPN1Q86U42 306 aaKnown RBP eCLIP10.43□□□□□ -0.74
AC055720.1-201ENST00000539552 CD44P16070 742 aaKnown RBP10.35□□□□□ -0.75
AC055720.1-201ENST00000539552 CLCN6P51797 869 aa10.34□□□□□ -0.75
AC055720.1-201ENST00000539552 DCBLD2Q96PD2 775 aa10.29□□□□□ -0.76
AC055720.1-201ENST00000539552 FARP1Q9Y4F1 1045 aaPredicted RBP10.29□□□□□ -0.76
AC055720.1-201ENST00000539552 ZRANB1Q9UGI0 708 aa10.17□□□□□ -0.78
AC055720.1-201ENST00000539552 STAG3Q9UJ98 1225 aa10.17□□□□□ -0.78
AC055720.1-201ENST00000539552 PAK3O75914 559 aaPredicted RBP10.16□□□□□ -0.78
AC055720.1-201ENST00000539552 PLSCR2Q9NRY7 297 aa10.16□□□□□ -0.78
AC055720.1-201ENST00000539552 POTEIP0CG38 1075 aa10.15□□□□□ -0.78
AC055720.1-201ENST00000539552 ZNF579Q8NAF0 562 aaKnown RBP10.12□□□□□ -0.79
AC055720.1-201ENST00000539552 NPM1P06748 294 aaKnown RBP eCLIP10.02□□□□□ -0.81
AC055720.1-201ENST00000539552 CREBZFQ9NS37 354 aa10.02□□□□□ -0.81
AC055720.1-201ENST00000539552 GALR2O43603 387 aaPredicted RBP10□□□□□ -0.81
AC055720.1-201ENST00000539552 SPDYE4A6NLX3 237 aa9.96□□□□□ -0.82
AC055720.1-201ENST00000539552 PHF12Q96QT6 1004 aa9.92□□□□□ -0.82
AC055720.1-201ENST00000539552 OTUD5Q96G74 571 aa9.9□□□□□ -0.82
AC055720.1-201ENST00000539552 POTEMA6NI47 508 aa9.88□□□□□ -0.83
AC055720.1-201ENST00000539552 CSRNP3Q8WYN3 585 aa9.88□□□□□ -0.83
AC055720.1-201ENST00000539552 MAMSTRQ6ZN01 415 aa9.84□□□□□ -0.83
AC055720.1-201ENST00000539552 SLC39A7Q92504 469 aa9.84□□□□□ -0.83
AC055720.1-201ENST00000539552 POTEGQ6S5H5 508 aa9.83□□□□□ -0.84
AC055720.1-201ENST00000539552 METRNQ9UJH8 293 aa9.83□□□□□ -0.84
AC055720.1-201ENST00000539552 POTEB2H3BUK9 544 aa9.81□□□□□ -0.84
AC055720.1-201ENST00000539552 C7P10643 843 aa9.81□□□□□ -0.84
AC055720.1-201ENST00000539552 PCDH10Q9P2E7 1040 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms