RNA–Protein interactions for RNA: ENST00000538195.1

PDCD2-206, Transcript of programmed cell death 2, humanhuman

TSL 5

Gene PDCD2, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-206ENST00000538195 AEBP2Q6ZN18 517 aaPredicted RBP29.24■■■□□ 2.27
PDCD2-206ENST00000538195 CHIC1Q5VXU3 224 aa29.11■■■□□ 2.25
PDCD2-206ENST00000538195 PHF23Q9BUL5 403 aaPredicted RBP25.69■■□□□ 1.7
PDCD2-206ENST00000538195 SENP3Q9H4L4 574 aaPredicted RBP24.68■■□□□ 1.54
PDCD2-206ENST00000538195 PLPPR3Q6T4P5 718 aa23.91■■□□□ 1.42
PDCD2-206ENST00000538195 FOXD1Q16676 465 aa22.86■■□□□ 1.25
PDCD2-206ENST00000538195 ADRA2BP18089 450 aa22.52■■□□□ 1.2
PDCD2-206ENST00000538195 PPP6R1Q9UPN7 881 aa22.49■■□□□ 1.19
PDCD2-206ENST00000538195 PIAS4Q8N2W9 510 aaPredicted RBP21.72■■□□□ 1.07
PDCD2-206ENST00000538195 KCNA4P22459 653 aa21.38■■□□□ 1.01
PDCD2-206ENST00000538195 PPP4R3CPQ6ZMV5 832 aa21.17■□□□□ 0.98
PDCD2-206ENST00000538195 MSH5O43196 834 aa20.81■□□□□ 0.92
PDCD2-206ENST00000538195 NCBP3Q53F19 620 aaKnown RBP20.77■□□□□ 0.92
PDCD2-206ENST00000538195 EHMT2Q96KQ7 1210 aa20.63■□□□□ 0.89
PDCD2-206ENST00000538195 SCAF1Q9H7N4 1312 aaKnown RBP20.55■□□□□ 0.88
PDCD2-206ENST00000538195 NPM3O75607 178 aaKnown RBP20.49■□□□□ 0.87
PDCD2-206ENST00000538195 SLC4A1APQ9BWU0 796 aaKnown RBP20.47■□□□□ 0.87
PDCD2-206ENST00000538195 CNKSR2Q8WXI2 1034 aa20.42■□□□□ 0.86
PDCD2-206ENST00000538195 MAPK8IP2Q13387 824 aaPredicted RBP20.26■□□□□ 0.83
PDCD2-206ENST00000538195 CSRNP3Q8WYN3 585 aa20.06■□□□□ 0.8
PDCD2-206ENST00000538195 RNF216Q9NWF9 866 aaPredicted RBP19.87■□□□□ 0.77
PDCD2-206ENST00000538195 DMRT2Q9Y5R5 561 aa19.8■□□□□ 0.76
PDCD2-206ENST00000538195 DNAJC5BQ9UF47 199 aa19.7■□□□□ 0.74
PDCD2-206ENST00000538195 ZBTB22O15209 634 aa19.67■□□□□ 0.74
PDCD2-206ENST00000538195 HOXD11P31277 338 aaPredicted RBP19.61■□□□□ 0.73
PDCD2-206ENST00000538195 FOXD4L1Q9NU39 408 aa19.48■□□□□ 0.71
PDCD2-206ENST00000538195 SLC4A2P04920 1241 aa19.19■□□□□ 0.66
PDCD2-206ENST00000538195 DCAF8L1A6NGE4 600 aa18.99■□□□□ 0.63
PDCD2-206ENST00000538195 MYCNP04198 464 aaPredicted RBP18.9■□□□□ 0.62
PDCD2-206ENST00000538195 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.75■□□□□ 0.59
PDCD2-206ENST00000538195 ATXN8OSP0DMR3 200 aa18.71■□□□□ 0.59
PDCD2-206ENST00000538195 U3KPZ7 1027 aaPredicted RBP18.49■□□□□ 0.55
PDCD2-206ENST00000538195 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.44■□□□□ 0.54
PDCD2-206ENST00000538195 HNRNPUL2Q1KMD3 747 aaKnown RBP18.44■□□□□ 0.54
PDCD2-206ENST00000538195 SAMD1Q6SPF0 538 aaPredicted RBP18.41■□□□□ 0.54
PDCD2-206ENST00000538195 ATF5Q9Y2D1 282 aaPredicted RBP18.39■□□□□ 0.53
PDCD2-206ENST00000538195 FKBP8Q14318 412 aa18.13■□□□□ 0.49
PDCD2-206ENST00000538195 APLP2Q06481 763 aa18.1■□□□□ 0.49
PDCD2-206ENST00000538195 ZNF219Q9P2Y4 722 aaPredicted RBP18.01■□□□□ 0.47
PDCD2-206ENST00000538195 POTEDQ86YR6 584 aa17.92■□□□□ 0.46
PDCD2-206ENST00000538195 RNF39Q9H2S5 420 aa17.9■□□□□ 0.46
PDCD2-206ENST00000538195 SPINK5Q9NQ38 1064 aaPredicted RBP17.82■□□□□ 0.44
PDCD2-206ENST00000538195 TRHP20396 242 aaPredicted RBP17.81■□□□□ 0.44
PDCD2-206ENST00000538195 CAPN15O75808 1086 aa17.73■□□□□ 0.43
PDCD2-206ENST00000538195 C1QBPQ07021 282 aaKnown RBP17.71■□□□□ 0.43
PDCD2-206ENST00000538195 POLA2Q14181 598 aa17.63■□□□□ 0.41
PDCD2-206ENST00000538195 MKRN4PQ13434 485 aaPredicted RBP17.6■□□□□ 0.41
PDCD2-206ENST00000538195 FBLN2P98095 1184 aa17.56■□□□□ 0.4
PDCD2-206ENST00000538195 RTN4Q9NQC3 1192 aaKnown RBP17.55■□□□□ 0.4
PDCD2-206ENST00000538195 AMER1Q5JTC6 1135 aaPredicted RBP17.54■□□□□ 0.4
PDCD2-206ENST00000538195 SPDYE4A6NLX3 237 aa17.51■□□□□ 0.39
PDCD2-206ENST00000538195 ABCB7O75027 752 aa17.46■□□□□ 0.39
PDCD2-206ENST00000538195 ZBTB12Q9Y330 459 aaPredicted RBP17.33■□□□□ 0.36
PDCD2-206ENST00000538195 FBXO3Q9UK99 471 aa17.27■□□□□ 0.36
PDCD2-206ENST00000538195 DSG3P32926 999 aa17.26■□□□□ 0.35
PDCD2-206ENST00000538195 PROM2Q8N271 834 aa17.25■□□□□ 0.35
PDCD2-206ENST00000538195 CACNB1Q02641 598 aaPredicted RBP17.04■□□□□ 0.32
PDCD2-206ENST00000538195 VASPP50552 380 aaPredicted RBP17.03■□□□□ 0.32
PDCD2-206ENST00000538195 OSCARQ8IYS5 282 aa17.02■□□□□ 0.32
PDCD2-206ENST00000538195 ZNF692Q9BU19 519 aaPredicted RBP17■□□□□ 0.31
PDCD2-206ENST00000538195 SPDYE2BA6NHP3 402 aa16.93■□□□□ 0.3
PDCD2-206ENST00000538195 SPDYE6P0CI01 402 aa16.93■□□□□ 0.3
PDCD2-206ENST00000538195 SPDYE2Q495Y8 402 aa16.93■□□□□ 0.3
PDCD2-206ENST00000538195 IFNLR1Q8IU57 520 aaPredicted RBP16.86■□□□□ 0.29
PDCD2-206ENST00000538195 SSUH2Q9Y2M2 353 aa16.86■□□□□ 0.29
PDCD2-206ENST00000538195 SLC24A1O60721 1099 aa16.83■□□□□ 0.28
PDCD2-206ENST00000538195 PABPN1Q86U42 306 aaKnown RBP eCLIP16.79■□□□□ 0.28
PDCD2-206ENST00000538195 STAG3Q9UJ98 1225 aa16.72■□□□□ 0.27
PDCD2-206ENST00000538195 KLHL34Q8N239 644 aa16.64■□□□□ 0.25
PDCD2-206ENST00000538195 PLCD3Q8N3E9 789 aa16.6■□□□□ 0.25
PDCD2-206ENST00000538195 MIER1Q8N108 512 aa16.55■□□□□ 0.24
PDCD2-206ENST00000538195 SPOCK2Q92563 424 aa16.55■□□□□ 0.24
PDCD2-206ENST00000538195 PKD2Q13563 968 aa16.52■□□□□ 0.24
PDCD2-206ENST00000538195 DCAF8L2P0C7V8 631 aa16.46■□□□□ 0.23
PDCD2-206ENST00000538195 RBM42Q9BTD8 480 aaKnown RBP16.41■□□□□ 0.22
PDCD2-206ENST00000538195 PLEKHG5O94827 1062 aa16.4■□□□□ 0.22
PDCD2-206ENST00000538195 AKT1S1Q96B36 256 aa16.34■□□□□ 0.21
PDCD2-206ENST00000538195 ECM2O94769 699 aaPredicted RBP16.33■□□□□ 0.2
PDCD2-206ENST00000538195 ZBTB47Q9UFB7 747 aaPredicted RBP16.33■□□□□ 0.2
PDCD2-206ENST00000538195 SPDYE1Q8NFV5 336 aaPredicted RBP16.3■□□□□ 0.2
PDCD2-206ENST00000538195 CLEC11AQ9Y240 323 aa16.25■□□□□ 0.19
PDCD2-206ENST00000538195 CIZ1Q9ULV3 898 aaPredicted RBP16.23■□□□□ 0.19
PDCD2-206ENST00000538195 PLCB2Q00722 1185 aa16.22■□□□□ 0.19
PDCD2-206ENST00000538195 REM2Q8IYK8 340 aaPredicted RBP16.21■□□□□ 0.19
PDCD2-206ENST00000538195 PRR29P0C7W0 189 aa16.16■□□□□ 0.18
PDCD2-206ENST00000538195 RGL2O15211 777 aa16.15■□□□□ 0.18
PDCD2-206ENST00000538195 CREBZFQ9NS37 354 aa16.08■□□□□ 0.16
PDCD2-206ENST00000538195 NPM1P06748 294 aaKnown RBP eCLIP16.04■□□□□ 0.16
PDCD2-206ENST00000538195 NUBP1P53384 320 aa16.03■□□□□ 0.16
PDCD2-206ENST00000538195 HAP1P54257 671 aaPredicted RBP16.03■□□□□ 0.16
PDCD2-206ENST00000538195 PITPNM1O00562 1244 aa16.02■□□□□ 0.16
PDCD2-206ENST00000538195 GSE1Q14687 1217 aa16.02■□□□□ 0.16
PDCD2-206ENST00000538195 TRIM41Q8WV44 630 aa16.01■□□□□ 0.15
PDCD2-206ENST00000538195 BBXQ8WY36 941 aaPredicted RBP16.01■□□□□ 0.15
PDCD2-206ENST00000538195 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.99■□□□□ 0.15
PDCD2-206ENST00000538195 DCAF8Q5TAQ9 597 aa15.98■□□□□ 0.15
PDCD2-206ENST00000538195 MNX1P50219 401 aaPredicted RBP15.97■□□□□ 0.15
PDCD2-206ENST00000538195 CHGAP10645 457 aaKnown RBP15.92■□□□□ 0.14
PDCD2-206ENST00000538195 FAM212AQ96EL1 285 aa15.91■□□□□ 0.14
PDCD2-206ENST00000538195 PAXIP1Q6ZW49 1069 aaPredicted RBP15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms