RNA–Protein interactions for RNA: ENST00000537063.1

UBE3B-207, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 3 BASIC

Gene UBE3B, Length 3,600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-207ENST00000537063 NISCHQ9Y2I1 1504 aa20.42■□□□□ 0.86
UBE3B-207ENST00000537063 CCDC180Q9P1Z9 1646 aa17.7■□□□□ 0.42
UBE3B-207ENST00000537063 ZCCHC6Q5VYS8 1495 aaKnown RBP17.27■□□□□ 0.36
UBE3B-207ENST00000537063 DCAF1Q9Y4B6 1507 aa16.94■□□□□ 0.3
UBE3B-207ENST00000537063 SHROOM4Q9ULL8 1493 aa16.79■□□□□ 0.28
UBE3B-207ENST00000537063 MYO15BQ96JP2 1530 aa16.59■□□□□ 0.25
UBE3B-207ENST00000537063 DCAF8L2P0C7V8 631 aa16.48■□□□□ 0.23
UBE3B-207ENST00000537063 NACADO15069 1562 aa16.33■□□□□ 0.2
UBE3B-207ENST00000537063 SUPT5HO00267 1087 aaKnown RBP16.3■□□□□ 0.2
UBE3B-207ENST00000537063 ABCC9O60706 1549 aa16.26■□□□□ 0.19
UBE3B-207ENST00000537063 SCRIBQ14160 1630 aa16.25■□□□□ 0.19
UBE3B-207ENST00000537063 RB1CC1Q8TDY2 1594 aa16.08■□□□□ 0.16
UBE3B-207ENST00000537063 RSF1Q96T23 1441 aaPredicted RBP15.97■□□□□ 0.15
UBE3B-207ENST00000537063 CHIC1Q5VXU3 224 aa15.9■□□□□ 0.14
UBE3B-207ENST00000537063 UNC13AQ9UPW8 1703 aa15.88■□□□□ 0.13
UBE3B-207ENST00000537063 CECR2Q9BXF3 1484 aa15.81■□□□□ 0.12
UBE3B-207ENST00000537063 MROH2BQ7Z745 1585 aa15.79■□□□□ 0.12
UBE3B-207ENST00000537063 BAZ1AQ9NRL2 1556 aaPredicted RBP15.73■□□□□ 0.11
UBE3B-207ENST00000537063 WIZO95785 1651 aa15.7■□□□□ 0.1
UBE3B-207ENST00000537063 BICRAQ9NZM4 1560 aa15.65■□□□□ 0.1
UBE3B-207ENST00000537063 SMARCA4P51532 1647 aa15.64■□□□□ 0.09
UBE3B-207ENST00000537063 EIF4G1Q04637 1599 aaKnown RBP15.55■□□□□ 0.08
UBE3B-207ENST00000537063 TOP2AP11388 1531 aaKnown RBP15.55■□□□□ 0.08
UBE3B-207ENST00000537063 PEG3Q9GZU2 1588 aa15.48■□□□□ 0.07
UBE3B-207ENST00000537063 SMARCA2P51531 1590 aa15.43■□□□□ 0.06
UBE3B-207ENST00000537063 CCDC88BA6NC98 1476 aa15.36■□□□□ 0.05
UBE3B-207ENST00000537063 PABPN1Q86U42 306 aaKnown RBP eCLIP15.32■□□□□ 0.04
UBE3B-207ENST00000537063 TRIM41Q8WV44 630 aa15.31■□□□□ 0.04
UBE3B-207ENST00000537063 LOC105371045A0A1W2PR82 267 aa15.25■□□□□ 0.03
UBE3B-207ENST00000537063 ATAD2BQ9ULI0 1458 aa15.24■□□□□ 0.03
UBE3B-207ENST00000537063 ABCC8Q09428 1581 aa15.17■□□□□ 0.02
UBE3B-207ENST00000537063 BAZ1BQ9UIG0 1483 aaKnown RBP15.15■□□□□ 0.02
UBE3B-207ENST00000537063 HMGXB3Q12766 1538 aa15.11■□□□□ 0.01
UBE3B-207ENST00000537063 NCAPD3P42695 1498 aa15.05■□□□□ 0
UBE3B-207ENST00000537063 FAM9AQ8IZU1 332 aaPredicted RBP15□□□□□ -0.01
UBE3B-207ENST00000537063 EEA1Q15075 1411 aa15□□□□□ -0.01
UBE3B-207ENST00000537063 WRNQ14191 1432 aaPredicted RBP eCLIP14.99□□□□□ -0.01
UBE3B-207ENST00000537063 SYNJ1O43426 1573 aa14.99□□□□□ -0.01
UBE3B-207ENST00000537063 PCGF6Q9BYE7 350 aa14.94□□□□□ -0.02
UBE3B-207ENST00000537063 SOGA1O94964 1423 aa14.93□□□□□ -0.02
UBE3B-207ENST00000537063 BIVM-ERCC5R4GMW8 1640 aa14.91□□□□□ -0.02
UBE3B-207ENST00000537063 TOP2BQ02880 1626 aa14.9□□□□□ -0.02
UBE3B-207ENST00000537063 HRCP23327 699 aa14.9□□□□□ -0.02
UBE3B-207ENST00000537063 PRDM2Q13029 1718 aa14.89□□□□□ -0.03
UBE3B-207ENST00000537063 TRIM26Q12899 539 aaPredicted RBP14.89□□□□□ -0.03
UBE3B-207ENST00000537063 RUSC2Q8N2Y8 1516 aa14.87□□□□□ -0.03
UBE3B-207ENST00000537063 KIF21BO75037 1637 aa14.85□□□□□ -0.03
UBE3B-207ENST00000537063 CFTRP13569 1480 aa14.83□□□□□ -0.04
UBE3B-207ENST00000537063 TNIKQ9UKE5 1360 aa14.83□□□□□ -0.04
UBE3B-207ENST00000537063 GOLGA3Q08378 1498 aa14.8□□□□□ -0.04
UBE3B-207ENST00000537063 CSRNP3Q8WYN3 585 aa14.8□□□□□ -0.04
UBE3B-207ENST00000537063 CC2D2AQ9P2K1 1620 aa14.78□□□□□ -0.04
UBE3B-207ENST00000537063 CEP162Q5TB80 1403 aa14.78□□□□□ -0.04
UBE3B-207ENST00000537063 CEP164Q9UPV0 1460 aa14.76□□□□□ -0.05
UBE3B-207ENST00000537063 CUX1P39880 1505 aa14.75□□□□□ -0.05
UBE3B-207ENST00000537063 EHMT2Q96KQ7 1210 aa14.74□□□□□ -0.05
UBE3B-207ENST00000537063 ERICH3Q5RHP9 1530 aa14.67□□□□□ -0.06
UBE3B-207ENST00000537063 CADPSQ9ULU8 1353 aa14.65□□□□□ -0.06
UBE3B-207ENST00000537063 PRXQ9BXM0 1461 aa14.63□□□□□ -0.07
UBE3B-207ENST00000537063 RAPGEF2Q9Y4G8 1499 aa14.63□□□□□ -0.07
UBE3B-207ENST00000537063 UBTFP17480 764 aaKnown RBP14.57□□□□□ -0.08
UBE3B-207ENST00000537063 KIF27Q86VH2 1401 aa14.55□□□□□ -0.08
UBE3B-207ENST00000537063 CLIP1P30622 1438 aa14.55□□□□□ -0.08
UBE3B-207ENST00000537063 VPS8Q8N3P4 1428 aa14.51□□□□□ -0.09
UBE3B-207ENST00000537063 FANCD2Q9BXW9 1451 aa14.51□□□□□ -0.09
UBE3B-207ENST00000537063 DNMBPQ6XZF7 1577 aa14.5□□□□□ -0.09
UBE3B-207ENST00000537063 LAMC3Q9Y6N6 1575 aa14.49□□□□□ -0.09
UBE3B-207ENST00000537063 FGD5Q6ZNL6 1462 aa14.49□□□□□ -0.09
UBE3B-207ENST00000537063 ZEB1P37275 1124 aaPredicted RBP14.48□□□□□ -0.09
UBE3B-207ENST00000537063 PPARGC1BQ86YN6 1023 aaKnown RBP14.46□□□□□ -0.1
UBE3B-207ENST00000537063 CUX2O14529 1486 aa14.43□□□□□ -0.1
UBE3B-207ENST00000537063 ARAP1Q96P48 1450 aa14.43□□□□□ -0.1
UBE3B-207ENST00000537063 TOPBP1Q92547 1522 aa14.42□□□□□ -0.1
UBE3B-207ENST00000537063 NESP48681 1621 aa14.42□□□□□ -0.1
UBE3B-207ENST00000537063 WDR97A6NE52 1622 aa14.41□□□□□ -0.1
UBE3B-207ENST00000537063 IGF1RP08069 1367 aa14.41□□□□□ -0.1
UBE3B-207ENST00000537063 ABCA10Q8WWZ4 1543 aa14.4□□□□□ -0.1
UBE3B-207ENST00000537063 POLA1P09884 1462 aaPredicted RBP14.37□□□□□ -0.11
UBE3B-207ENST00000537063 URB2Q14146 1524 aaKnown RBP14.34□□□□□ -0.11
UBE3B-207ENST00000537063 CUL7Q14999 1698 aa14.34□□□□□ -0.11
UBE3B-207ENST00000537063 ARHGAP35Q9NRY4 1499 aa14.34□□□□□ -0.11
UBE3B-207ENST00000537063 KIF21AQ7Z4S6 1674 aa14.32□□□□□ -0.12
UBE3B-207ENST00000537063 CARMIL1Q5VZK9 1371 aa14.31□□□□□ -0.12
UBE3B-207ENST00000537063 RAD54L2Q9Y4B4 1467 aa14.3□□□□□ -0.12
UBE3B-207ENST00000537063 ABCA5Q8WWZ7 1642 aa14.3□□□□□ -0.12
UBE3B-207ENST00000537063 PDS5BQ9NTI5 1447 aa14.29□□□□□ -0.12
UBE3B-207ENST00000537063 CTTNBP2Q8WZ74 1663 aa14.26□□□□□ -0.13
UBE3B-207ENST00000537063 MAP3K1Q13233 1512 aa14.25□□□□□ -0.13
UBE3B-207ENST00000537063 TTBK1Q5TCY1 1321 aaPredicted RBP14.23□□□□□ -0.13
UBE3B-207ENST00000537063 TARBP1Q13395 1621 aaKnown RBP14.23□□□□□ -0.13
UBE3B-207ENST00000537063 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.21□□□□□ -0.13
UBE3B-207ENST00000537063 DNAJC5BQ9UF47 199 aa14.21□□□□□ -0.13
UBE3B-207ENST00000537063 EFCAB5A4FU69 1503 aa14.21□□□□□ -0.14
UBE3B-207ENST00000537063 APLP2Q06481 763 aa14.2□□□□□ -0.14
UBE3B-207ENST00000537063 CFAP43Q8NDM7 1665 aa14.19□□□□□ -0.14
UBE3B-207ENST00000537063 TIAM1Q13009 1591 aa14.18□□□□□ -0.14
UBE3B-207ENST00000537063 RANGAP1P46060 587 aaPredicted RBP14.17□□□□□ -0.14
UBE3B-207ENST00000537063 RRBP1Q9P2E9 1410 aaKnown RBP14.17□□□□□ -0.14
UBE3B-207ENST00000537063 CCER1Q8TC90 406 aaPredicted RBP14.17□□□□□ -0.14
UBE3B-207ENST00000537063 GAPVD1Q14C86 1478 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 169.9 ms