RNA–Protein interactions for RNA: ENST00000535776.5

RAB18-207, Transcript of RAB18, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB18, Length 4,811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB18-207ENST00000535776 DCAF8L2P0C7V8 631 aa25.77■■□□□ 1.72
RAB18-207ENST00000535776 NISCHQ9Y2I1 1504 aa24.54■■□□□ 1.52
RAB18-207ENST00000535776 SUPT5HO00267 1087 aaKnown RBP24.17■■□□□ 1.46
RAB18-207ENST00000535776 SHROOM4Q9ULL8 1493 aa23.78■■□□□ 1.4
RAB18-207ENST00000535776 EHMT2Q96KQ7 1210 aa23.31■■□□□ 1.32
RAB18-207ENST00000535776 APLP2Q06481 763 aa22.93■■□□□ 1.26
RAB18-207ENST00000535776 FAM9AQ8IZU1 332 aaPredicted RBP22.8■■□□□ 1.24
RAB18-207ENST00000535776 TTBK1Q5TCY1 1321 aaPredicted RBP22.46■■□□□ 1.19
RAB18-207ENST00000535776 RANGAP1P46060 587 aaPredicted RBP22.42■■□□□ 1.18
RAB18-207ENST00000535776 TRIM41Q8WV44 630 aa22.41■■□□□ 1.18
RAB18-207ENST00000535776 ATP1B4Q9UN42 357 aaPredicted RBP22.26■■□□□ 1.15
RAB18-207ENST00000535776 PELP1Q8IZL8 1130 aaKnown RBP22.19■■□□□ 1.14
RAB18-207ENST00000535776 UBTFP17480 764 aaKnown RBP22.18■■□□□ 1.14
RAB18-207ENST00000535776 PCGF6Q9BYE7 350 aa22.18■■□□□ 1.14
RAB18-207ENST00000535776 CCER1Q8TC90 406 aaPredicted RBP21.9■■□□□ 1.1
RAB18-207ENST00000535776 ZEB1P37275 1124 aaPredicted RBP21.77■■□□□ 1.08
RAB18-207ENST00000535776 PPARGC1BQ86YN6 1023 aaKnown RBP21.61■■□□□ 1.05
RAB18-207ENST00000535776 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.59■■□□□ 1.05
RAB18-207ENST00000535776 HNRNPUL2Q1KMD3 747 aaKnown RBP21.59■■□□□ 1.05
RAB18-207ENST00000535776 CENPBP07199 599 aaPredicted RBP21.55■■□□□ 1.04
RAB18-207ENST00000535776 MYT1LQ9UL68 1186 aa21.5■■□□□ 1.03
RAB18-207ENST00000535776 ABCC9O60706 1549 aa21.46■■□□□ 1.03
RAB18-207ENST00000535776 PABPN1Q86U42 306 aaKnown RBP eCLIP21.43■■□□□ 1.02
RAB18-207ENST00000535776 ITGAEP38570 1179 aa21.41■■□□□ 1.02
RAB18-207ENST00000535776 CHIC1Q5VXU3 224 aa21.34■■□□□ 1.01
RAB18-207ENST00000535776 LOC105371045A0A1W2PR82 267 aa21.31■■□□□ 1
RAB18-207ENST00000535776 TRIM26Q12899 539 aaPredicted RBP21.31■■□□□ 1
RAB18-207ENST00000535776 NEFLP07196 543 aa21.22■□□□□ 0.99
RAB18-207ENST00000535776 ERICH6Q7L0X2 663 aa21.19■□□□□ 0.98
RAB18-207ENST00000535776 YTHDC1Q96MU7 727 aaKnown RBP21.18■□□□□ 0.98
RAB18-207ENST00000535776 POLR3GLQ9BT43 218 aa21.13■□□□□ 0.97
RAB18-207ENST00000535776 FBLN2P98095 1184 aa20.9■□□□□ 0.94
RAB18-207ENST00000535776 CNGB1Q14028 1251 aaPredicted RBP20.89■□□□□ 0.94
RAB18-207ENST00000535776 FAM50AQ14320 339 aaKnown RBP20.89■□□□□ 0.93
RAB18-207ENST00000535776 HRCP23327 699 aa20.88■□□□□ 0.93
RAB18-207ENST00000535776 SLC4A1APQ9BWU0 796 aaKnown RBP20.81■□□□□ 0.92
RAB18-207ENST00000535776 TRIM52Q96A61 297 aa20.78■□□□□ 0.92
RAB18-207ENST00000535776 NEUROD1Q13562 356 aa20.59■□□□□ 0.89
RAB18-207ENST00000535776 P3H3Q8IVL6 736 aa20.57■□□□□ 0.88
RAB18-207ENST00000535776 CSRNP3Q8WYN3 585 aa20.57■□□□□ 0.88
RAB18-207ENST00000535776 DAXXQ9UER7 740 aaPredicted RBP20.55■□□□□ 0.88
RAB18-207ENST00000535776 ARID3CA6NKF2 412 aa20.52■□□□□ 0.88
RAB18-207ENST00000535776 ZNF326Q5BKZ1 582 aaKnown RBP20.5■□□□□ 0.87
RAB18-207ENST00000535776 SCRIBQ14160 1630 aa20.44■□□□□ 0.86
RAB18-207ENST00000535776 DIEXFQ68CQ4 756 aaKnown RBP20.44■□□□□ 0.86
RAB18-207ENST00000535776 CDK11AQ9UQ88 783 aaPredicted RBP20.39■□□□□ 0.86
RAB18-207ENST00000535776 ZNF777Q9ULD5 760 aaPredicted RBP20.37■□□□□ 0.85
RAB18-207ENST00000535776 BCANQ96GW7 911 aa20.31■□□□□ 0.84
RAB18-207ENST00000535776 CLSPNQ9HAW4 1339 aa20.31■□□□□ 0.84
RAB18-207ENST00000535776 NPM1P06748 294 aaKnown RBP eCLIP20.24■□□□□ 0.83
RAB18-207ENST00000535776 ANP32CO43423 234 aa20.24■□□□□ 0.83
RAB18-207ENST00000535776 ZCCHC6Q5VYS8 1495 aaKnown RBP20.22■□□□□ 0.83
RAB18-207ENST00000535776 ESF1Q9H501 851 aaKnown RBP20.21■□□□□ 0.83
RAB18-207ENST00000535776 NEFMP07197 916 aa20.09■□□□□ 0.81
RAB18-207ENST00000535776 SLC24A1O60721 1099 aa20.08■□□□□ 0.81
RAB18-207ENST00000535776 ZNF316A6NFI3 1004 aaPredicted RBP20.06■□□□□ 0.8
RAB18-207ENST00000535776 CHGAP10645 457 aaKnown RBP20.06■□□□□ 0.8
RAB18-207ENST00000535776 STAG3Q9UJ98 1225 aa20.05■□□□□ 0.8
RAB18-207ENST00000535776 ZBTB47Q9UFB7 747 aaPredicted RBP20.04■□□□□ 0.8
RAB18-207ENST00000535776 CHMP7Q8WUX9 453 aaPredicted RBP20.03■□□□□ 0.8
RAB18-207ENST00000535776 PLPPR3Q6T4P5 718 aa19.99■□□□□ 0.79
RAB18-207ENST00000535776 MYT1Q01538 1121 aa19.96■□□□□ 0.79
RAB18-207ENST00000535776 CANXP27824 592 aaKnown RBP19.94■□□□□ 0.78
RAB18-207ENST00000535776 CHIC2Q9UKJ5 165 aa19.93■□□□□ 0.78
RAB18-207ENST00000535776 TSPY4P0CV99 314 aa19.93■□□□□ 0.78
RAB18-207ENST00000535776 TSPY10P0CW01 314 aa19.93■□□□□ 0.78
RAB18-207ENST00000535776 CCDC180Q9P1Z9 1646 aa19.92■□□□□ 0.78
RAB18-207ENST00000535776 TONSLQ96HA7 1378 aa19.91■□□□□ 0.78
RAB18-207ENST00000535776 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.91■□□□□ 0.782e-7■■□□□ 13.4
RAB18-207ENST00000535776 RTL5Q5HYW3 569 aaPredicted RBP19.9■□□□□ 0.78
RAB18-207ENST00000535776 RB1CC1Q8TDY2 1594 aa19.89■□□□□ 0.77
RAB18-207ENST00000535776 BCL11AQ9H165 835 aa19.88■□□□□ 0.77
RAB18-207ENST00000535776 MTUS2Q5JR59 1369 aa19.85■□□□□ 0.77
RAB18-207ENST00000535776 GTF3C3Q9Y5Q9 886 aa19.78■□□□□ 0.76
RAB18-207ENST00000535776 KCNH8Q96L42 1107 aa19.75■□□□□ 0.75
RAB18-207ENST00000535776 PLEKHD1A6NEE1 506 aa19.72■□□□□ 0.75
RAB18-207ENST00000535776 CLIP1P30622 1438 aa19.71■□□□□ 0.75
RAB18-207ENST00000535776 RSF1Q96T23 1441 aaPredicted RBP19.7■□□□□ 0.74
RAB18-207ENST00000535776 KDM2AQ9Y2K7 1162 aa19.7■□□□□ 0.74
RAB18-207ENST00000535776 DDX10Q13206 875 aaKnown RBP19.68■□□□□ 0.74
RAB18-207ENST00000535776 NACADO15069 1562 aa19.66■□□□□ 0.74
RAB18-207ENST00000535776 BAZ1BQ9UIG0 1483 aaKnown RBP19.65■□□□□ 0.74
RAB18-207ENST00000535776 RRP7BPQ9NSQ0 103 aa19.62■□□□□ 0.73
RAB18-207ENST00000535776 FAM9BQ8IZU0 186 aa19.6■□□□□ 0.73
RAB18-207ENST00000535776 WRNQ14191 1432 aaPredicted RBP eCLIP19.6■□□□□ 0.73
RAB18-207ENST00000535776 DCAF1Q9Y4B6 1507 aa19.6■□□□□ 0.73
RAB18-207ENST00000535776 EEA1Q15075 1411 aa19.6■□□□□ 0.73
RAB18-207ENST00000535776 HNRNPUQ00839 825 aaKnown RBP eCLIP19.59■□□□□ 0.73
RAB18-207ENST00000535776 TMC1Q8TDI8 760 aa19.58■□□□□ 0.73
RAB18-207ENST00000535776 SALL2Q9Y467 1007 aaPredicted RBP19.57■□□□□ 0.72
RAB18-207ENST00000535776 KIF27Q86VH2 1401 aa19.54■□□□□ 0.72
RAB18-207ENST00000535776 PPP1R15AO75807 674 aaPredicted RBP19.53■□□□□ 0.72
RAB18-207ENST00000535776 CFDP1Q9UEE9 299 aaPredicted RBP19.53■□□□□ 0.72
RAB18-207ENST00000535776 GOLGA3Q08378 1498 aa19.5■□□□□ 0.71
RAB18-207ENST00000535776 ACIN1Q9UKV3 1341 aaKnown RBP19.5■□□□□ 0.71
RAB18-207ENST00000535776 ERCC6Q03468 1493 aa19.5■□□□□ 0.71
RAB18-207ENST00000535776 SENP3Q9H4L4 574 aaPredicted RBP19.5■□□□□ 0.71
RAB18-207ENST00000535776 SCAF1Q9H7N4 1312 aaKnown RBP19.49■□□□□ 0.71
RAB18-207ENST00000535776 WDR43Q15061 677 aaKnown RBP eCLIP19.48■□□□□ 0.71
RAB18-207ENST00000535776 ARID4BQ4LE39 1312 aaPredicted RBP19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms