RNA–Protein interactions for RNA: ENST00000535726.5

NDUFA9-204, Transcript of NADH:ubiquinone oxidoreductase subunit A9, humanhuman

TSL 5

Gene NDUFA9, Length 930 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA9-204ENST00000535726 AEBP2Q6ZN18 517 aaPredicted RBP28.01■■■□□ 2.07
NDUFA9-204ENST00000535726 CHIC1Q5VXU3 224 aa27.23■■□□□ 1.95
NDUFA9-204ENST00000535726 SENP3Q9H4L4 574 aaPredicted RBP23.98■■□□□ 1.43
NDUFA9-204ENST00000535726 PHF23Q9BUL5 403 aaPredicted RBP23.82■■□□□ 1.4
NDUFA9-204ENST00000535726 FOXD1Q16676 465 aa22.18■■□□□ 1.14
NDUFA9-204ENST00000535726 PLPPR3Q6T4P5 718 aa22.06■■□□□ 1.12
NDUFA9-204ENST00000535726 PPP6R1Q9UPN7 881 aa21.09■□□□□ 0.97
NDUFA9-204ENST00000535726 ADRA2BP18089 450 aa21.05■□□□□ 0.96
NDUFA9-204ENST00000535726 PIAS4Q8N2W9 510 aaPredicted RBP20.87■□□□□ 0.93
NDUFA9-204ENST00000535726 MSH5O43196 834 aa20.69■□□□□ 0.9
NDUFA9-204ENST00000535726 SCAF1Q9H7N4 1312 aaKnown RBP19.5■□□□□ 0.71
NDUFA9-204ENST00000535726 PPP4R3CPQ6ZMV5 832 aa19.34■□□□□ 0.69
NDUFA9-204ENST00000535726 POTEDQ86YR6 584 aa19.16■□□□□ 0.66
NDUFA9-204ENST00000535726 MAPK8IP2Q13387 824 aaPredicted RBP19.15■□□□□ 0.66
NDUFA9-204ENST00000535726 DMRT2Q9Y5R5 561 aa19.07■□□□□ 0.64
NDUFA9-204ENST00000535726 CNKSR2Q8WXI2 1034 aa18.92■□□□□ 0.62
NDUFA9-204ENST00000535726 NCBP3Q53F19 620 aaKnown RBP18.87■□□□□ 0.61
NDUFA9-204ENST00000535726 RNF216Q9NWF9 866 aaPredicted RBP18.62■□□□□ 0.57
NDUFA9-204ENST00000535726 HOXD11P31277 338 aaPredicted RBP18.59■□□□□ 0.57
NDUFA9-204ENST00000535726 KCNA4P22459 653 aa18.52■□□□□ 0.56
NDUFA9-204ENST00000535726 NPM3O75607 178 aaKnown RBP18.46■□□□□ 0.55
NDUFA9-204ENST00000535726 DCAF8L1A6NGE4 600 aa18.18■□□□□ 0.5
NDUFA9-204ENST00000535726 DNAJC5BQ9UF47 199 aa18.15■□□□□ 0.5
NDUFA9-204ENST00000535726 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.69■□□□□ 0.42
NDUFA9-204ENST00000535726 SLC4A1APQ9BWU0 796 aaKnown RBP17.65■□□□□ 0.42
NDUFA9-204ENST00000535726 RNF39Q9H2S5 420 aa17.63■□□□□ 0.41
NDUFA9-204ENST00000535726 C1QBPQ07021 282 aaKnown RBP17.49■□□□□ 0.39
NDUFA9-204ENST00000535726 SLC4A2P04920 1241 aa17.46■□□□□ 0.39
NDUFA9-204ENST00000535726 CACNB1Q02641 598 aaPredicted RBP17.35■□□□□ 0.37
NDUFA9-204ENST00000535726 U3KPZ7 1027 aaPredicted RBP17.32■□□□□ 0.36
NDUFA9-204ENST00000535726 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.21■□□□□ 0.35
NDUFA9-204ENST00000535726 HNRNPUL2Q1KMD3 747 aaKnown RBP17.21■□□□□ 0.35
NDUFA9-204ENST00000535726 FOXD4L1Q9NU39 408 aa17.21■□□□□ 0.35
NDUFA9-204ENST00000535726 MYCNP04198 464 aaPredicted RBP17.14■□□□□ 0.33
NDUFA9-204ENST00000535726 APLP2Q06481 763 aa17.12■□□□□ 0.33
NDUFA9-204ENST00000535726 SAMD1Q6SPF0 538 aaPredicted RBP17.09■□□□□ 0.33
NDUFA9-204ENST00000535726 ZBTB22O15209 634 aa16.98■□□□□ 0.31
NDUFA9-204ENST00000535726 CAPN15O75808 1086 aa16.87■□□□□ 0.29
NDUFA9-204ENST00000535726 SPINK5Q9NQ38 1064 aaPredicted RBP16.87■□□□□ 0.29
NDUFA9-204ENST00000535726 ZNF219Q9P2Y4 722 aaPredicted RBP16.82■□□□□ 0.28
NDUFA9-204ENST00000535726 CSRNP3Q8WYN3 585 aa16.75■□□□□ 0.27
NDUFA9-204ENST00000535726 ATXN8OSP0DMR3 200 aa16.74■□□□□ 0.27
NDUFA9-204ENST00000535726 EHMT2Q96KQ7 1210 aa16.74■□□□□ 0.27
NDUFA9-204ENST00000535726 TRHP20396 242 aaPredicted RBP16.71■□□□□ 0.27
NDUFA9-204ENST00000535726 DSG3P32926 999 aa16.67■□□□□ 0.26
NDUFA9-204ENST00000535726 ATF5Q9Y2D1 282 aaPredicted RBP16.54■□□□□ 0.24
NDUFA9-204ENST00000535726 ABCB7O75027 752 aa16.45■□□□□ 0.22
NDUFA9-204ENST00000535726 POLA2Q14181 598 aa16.42■□□□□ 0.22
NDUFA9-204ENST00000535726 ZBTB12Q9Y330 459 aaPredicted RBP16.28■□□□□ 0.2
NDUFA9-204ENST00000535726 FBLN2P98095 1184 aa16.05■□□□□ 0.16
NDUFA9-204ENST00000535726 RBM42Q9BTD8 480 aaKnown RBP16.02■□□□□ 0.16
NDUFA9-204ENST00000535726 MKRN4PQ13434 485 aaPredicted RBP15.84■□□□□ 0.13
NDUFA9-204ENST00000535726 OSCARQ8IYS5 282 aa15.82■□□□□ 0.12
NDUFA9-204ENST00000535726 SPDYE2BA6NHP3 402 aa15.76■□□□□ 0.11
NDUFA9-204ENST00000535726 SPDYE6P0CI01 402 aa15.76■□□□□ 0.11
NDUFA9-204ENST00000535726 SPDYE2Q495Y8 402 aa15.76■□□□□ 0.11
NDUFA9-204ENST00000535726 AKT1S1Q96B36 256 aa15.72■□□□□ 0.11
NDUFA9-204ENST00000535726 ZNF692Q9BU19 519 aaPredicted RBP15.61■□□□□ 0.09
NDUFA9-204ENST00000535726 SSUH2Q9Y2M2 353 aa15.55■□□□□ 0.08
NDUFA9-204ENST00000535726 REM2Q8IYK8 340 aaPredicted RBP15.5■□□□□ 0.07
NDUFA9-204ENST00000535726 SPDYE4A6NLX3 237 aa15.44■□□□□ 0.06
NDUFA9-204ENST00000535726 PABPN1Q86U42 306 aaKnown RBP eCLIP15.36■□□□□ 0.05
NDUFA9-204ENST00000535726 CHRDL2Q6WN34 429 aa15.35■□□□□ 0.05
NDUFA9-204ENST00000535726 SPDYE1Q8NFV5 336 aaPredicted RBP15.35■□□□□ 0.05
NDUFA9-204ENST00000535726 PITPNM1O00562 1244 aa15.29■□□□□ 0.04
NDUFA9-204ENST00000535726 STAG3Q9UJ98 1225 aa15.2■□□□□ 0.02
NDUFA9-204ENST00000535726 CLEC11AQ9Y240 323 aa15.2■□□□□ 0.02
NDUFA9-204ENST00000535726 PROM2Q8N271 834 aa15.18■□□□□ 0.02
NDUFA9-204ENST00000535726 FKBP8Q14318 412 aa15.15■□□□□ 0.02
NDUFA9-204ENST00000535726 POTEHQ6S545 545 aa15.15■□□□□ 0.02
NDUFA9-204ENST00000535726 FXR2P51116 673 aaKnown RBP eCLIP15.12■□□□□ 0.01
NDUFA9-204ENST00000535726 PRR29P0C7W0 189 aa15.09■□□□□ 0.01
NDUFA9-204ENST00000535726 PIP4P2Q8N4L2 257 aa15.07■□□□□ 0
NDUFA9-204ENST00000535726 PRKAR2AP13861 404 aaKnown RBP14.93□□□□□ -0.02
NDUFA9-204ENST00000535726 FBXO3Q9UK99 471 aa14.86□□□□□ -0.03
NDUFA9-204ENST00000535726 CHADLQ6NUI6 762 aa14.78□□□□□ -0.04
NDUFA9-204ENST00000535726 CREBZFQ9NS37 354 aa14.78□□□□□ -0.04
NDUFA9-204ENST00000535726 PLEKHG5O94827 1062 aa14.75□□□□□ -0.05
NDUFA9-204ENST00000535726 FARP1Q9Y4F1 1045 aaPredicted RBP14.73□□□□□ -0.05
NDUFA9-204ENST00000535726 HAX1O00165 279 aa14.68□□□□□ -0.06
NDUFA9-204ENST00000535726 MIER1Q8N108 512 aa14.68□□□□□ -0.06
NDUFA9-204ENST00000535726 NPM1P06748 294 aaKnown RBP eCLIP14.65□□□□□ -0.06
NDUFA9-204ENST00000535726 PLCD3Q8N3E9 789 aa14.63□□□□□ -0.07
NDUFA9-204ENST00000535726 ZBTB47Q9UFB7 747 aaPredicted RBP14.62□□□□□ -0.07
NDUFA9-204ENST00000535726 C19orf67A6NJJ6 358 aa14.6□□□□□ -0.07
NDUFA9-204ENST00000535726 MNX1P50219 401 aaPredicted RBP14.59□□□□□ -0.07
NDUFA9-204ENST00000535726 VASPP50552 380 aaPredicted RBP14.53□□□□□ -0.08
NDUFA9-204ENST00000535726 CD44P16070 742 aaKnown RBP14.49□□□□□ -0.09
NDUFA9-204ENST00000535726 SP7Q8TDD2 431 aaPredicted RBP14.47□□□□□ -0.09
NDUFA9-204ENST00000535726 PAK3O75914 559 aaPredicted RBP14.46□□□□□ -0.09
NDUFA9-204ENST00000535726 CLCN6P51797 869 aa14.43□□□□□ -0.1
NDUFA9-204ENST00000535726 EVX2Q03828 476 aa14.42□□□□□ -0.1
NDUFA9-204ENST00000535726 ZRANB1Q9UGI0 708 aa14.37□□□□□ -0.11
NDUFA9-204ENST00000535726 KLHL34Q8N239 644 aa14.36□□□□□ -0.11
NDUFA9-204ENST00000535726 ZNF579Q8NAF0 562 aaKnown RBP14.33□□□□□ -0.12
NDUFA9-204ENST00000535726 NUBP1P53384 320 aa14.3□□□□□ -0.12
NDUFA9-204ENST00000535726 IFNLR1Q8IU57 520 aaPredicted RBP14.29□□□□□ -0.12
NDUFA9-204ENST00000535726 RASEFQ8IZ41 740 aa14.26□□□□□ -0.13
NDUFA9-204ENST00000535726 FAM212AQ96EL1 285 aa14.26□□□□□ -0.13
NDUFA9-204ENST00000535726 TSPYL2Q9H2G4 693 aaPredicted RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms