RNA–Protein interactions for RNA: ENST00000535709.5

GYPA-211, Transcript of glycophorin A (MNS blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GYPA, Length 695 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-211ENST00000535709 AEBP2Q6ZN18 517 aaPredicted RBP17.98■□□□□ 0.47
GYPA-211ENST00000535709 CHIC1Q5VXU3 224 aa17.34■□□□□ 0.37
GYPA-211ENST00000535709 SENP3Q9H4L4 574 aaPredicted RBP15.4■□□□□ 0.06
GYPA-211ENST00000535709 PHF23Q9BUL5 403 aaPredicted RBP15.16■□□□□ 0.02
GYPA-211ENST00000535709 FOXD1Q16676 465 aa14.25□□□□□ -0.13
GYPA-211ENST00000535709 PLPPR3Q6T4P5 718 aa13.97□□□□□ -0.17
GYPA-211ENST00000535709 PPP6R1Q9UPN7 881 aa13.43□□□□□ -0.26
GYPA-211ENST00000535709 ADRA2BP18089 450 aa13.39□□□□□ -0.27
GYPA-211ENST00000535709 PIAS4Q8N2W9 510 aaPredicted RBP13.39□□□□□ -0.27
GYPA-211ENST00000535709 MSH5O43196 834 aa13.36□□□□□ -0.27
GYPA-211ENST00000535709 POTEDQ86YR6 584 aa12.61□□□□□ -0.39
GYPA-211ENST00000535709 SCAF1Q9H7N4 1312 aaKnown RBP12.37□□□□□ -0.43
GYPA-211ENST00000535709 DMRT2Q9Y5R5 561 aa12.23□□□□□ -0.45
GYPA-211ENST00000535709 MAPK8IP2Q13387 824 aaPredicted RBP12.22□□□□□ -0.45
GYPA-211ENST00000535709 PPP4R3CPQ6ZMV5 832 aa12.22□□□□□ -0.45
GYPA-211ENST00000535709 CNKSR2Q8WXI2 1034 aa11.99□□□□□ -0.49
GYPA-211ENST00000535709 HOXD11P31277 338 aaPredicted RBP11.87□□□□□ -0.51
GYPA-211ENST00000535709 NCBP3Q53F19 620 aaKnown RBP11.87□□□□□ -0.51
GYPA-211ENST00000535709 RNF216Q9NWF9 866 aaPredicted RBP11.84□□□□□ -0.51
GYPA-211ENST00000535709 NPM3O75607 178 aaKnown RBP11.64□□□□□ -0.55
GYPA-211ENST00000535709 DCAF8L1A6NGE4 600 aa11.63□□□□□ -0.55
GYPA-211ENST00000535709 KCNA4P22459 653 aa11.56□□□□□ -0.56
GYPA-211ENST00000535709 DNAJC5BQ9UF47 199 aa11.51□□□□□ -0.57
GYPA-211ENST00000535709 RNF39Q9H2S5 420 aa11.37□□□□□ -0.59
GYPA-211ENST00000535709 CACNB1Q02641 598 aaPredicted RBP11.26□□□□□ -0.61
GYPA-211ENST00000535709 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.26□□□□□ -0.61
GYPA-211ENST00000535709 C1QBPQ07021 282 aaKnown RBP11.25□□□□□ -0.61
GYPA-211ENST00000535709 U3KPZ7 1027 aaPredicted RBP11.06□□□□□ -0.64
GYPA-211ENST00000535709 SLC4A2P04920 1241 aa11.05□□□□□ -0.64
GYPA-211ENST00000535709 SLC4A1APQ9BWU0 796 aaKnown RBP10.99□□□□□ -0.65
GYPA-211ENST00000535709 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.9□□□□□ -0.66
GYPA-211ENST00000535709 HNRNPUL2Q1KMD3 747 aaKnown RBP10.9□□□□□ -0.66
GYPA-211ENST00000535709 APLP2Q06481 763 aa10.89□□□□□ -0.67
GYPA-211ENST00000535709 MYCNP04198 464 aaPredicted RBP10.82□□□□□ -0.68
GYPA-211ENST00000535709 SAMD1Q6SPF0 538 aaPredicted RBP10.82□□□□□ -0.68
GYPA-211ENST00000535709 FOXD4L1Q9NU39 408 aa10.81□□□□□ -0.68
GYPA-211ENST00000535709 CAPN15O75808 1086 aa10.78□□□□□ -0.68
GYPA-211ENST00000535709 SPINK5Q9NQ38 1064 aaPredicted RBP10.78□□□□□ -0.68
GYPA-211ENST00000535709 ZNF219Q9P2Y4 722 aaPredicted RBP10.73□□□□□ -0.69
GYPA-211ENST00000535709 DSG3P32926 999 aa10.7□□□□□ -0.7
GYPA-211ENST00000535709 TRHP20396 242 aaPredicted RBP10.64□□□□□ -0.71
GYPA-211ENST00000535709 ZBTB22O15209 634 aa10.62□□□□□ -0.71
GYPA-211ENST00000535709 ABCB7O75027 752 aa10.52□□□□□ -0.73
GYPA-211ENST00000535709 ATXN8OSP0DMR3 200 aa10.49□□□□□ -0.73
GYPA-211ENST00000535709 ATF5Q9Y2D1 282 aaPredicted RBP10.43□□□□□ -0.74
GYPA-211ENST00000535709 POLA2Q14181 598 aa10.41□□□□□ -0.74
GYPA-211ENST00000535709 ZBTB12Q9Y330 459 aaPredicted RBP10.34□□□□□ -0.75
GYPA-211ENST00000535709 CSRNP3Q8WYN3 585 aa10.32□□□□□ -0.76
GYPA-211ENST00000535709 RBM42Q9BTD8 480 aaKnown RBP10.29□□□□□ -0.76
GYPA-211ENST00000535709 EHMT2Q96KQ7 1210 aa10.26□□□□□ -0.77
GYPA-211ENST00000535709 FBLN2P98095 1184 aa10.12□□□□□ -0.79
GYPA-211ENST00000535709 OSCARQ8IYS5 282 aa10.09□□□□□ -0.79
GYPA-211ENST00000535709 AKT1S1Q96B36 256 aa10.06□□□□□ -0.8
GYPA-211ENST00000535709 SPDYE2BA6NHP3 402 aa10□□□□□ -0.81
GYPA-211ENST00000535709 SPDYE6P0CI01 402 aa10□□□□□ -0.81
GYPA-211ENST00000535709 MKRN4PQ13434 485 aaPredicted RBP10□□□□□ -0.81
GYPA-211ENST00000535709 SPDYE2Q495Y8 402 aa10□□□□□ -0.81
GYPA-211ENST00000535709 POTEHQ6S545 545 aa9.94□□□□□ -0.82
GYPA-211ENST00000535709 CHRDL2Q6WN34 429 aa9.91□□□□□ -0.82
GYPA-211ENST00000535709 REM2Q8IYK8 340 aaPredicted RBP9.91□□□□□ -0.82
GYPA-211ENST00000535709 SSUH2Q9Y2M2 353 aa9.88□□□□□ -0.83
GYPA-211ENST00000535709 ZNF692Q9BU19 519 aaPredicted RBP9.85□□□□□ -0.83
GYPA-211ENST00000535709 PITPNM1O00562 1244 aa9.81□□□□□ -0.84
GYPA-211ENST00000535709 SPDYE1Q8NFV5 336 aaPredicted RBP9.77□□□□□ -0.85
GYPA-211ENST00000535709 SLC24A1O60721 1099 aa9.72□□□□□ -0.85
GYPA-211ENST00000535709 PABPN1Q86U42 306 aaKnown RBP eCLIP9.71□□□□□ -0.86
GYPA-211ENST00000535709 FXR2P51116 673 aaKnown RBP eCLIP9.7□□□□□ -0.86
GYPA-211ENST00000535709 PIP4P2Q8N4L2 257 aa9.7□□□□□ -0.86
GYPA-211ENST00000535709 SPDYE4A6NLX3 237 aa9.66□□□□□ -0.86
GYPA-211ENST00000535709 CLEC11AQ9Y240 323 aa9.66□□□□□ -0.86
GYPA-211ENST00000535709 PRR29P0C7W0 189 aa9.56□□□□□ -0.88
GYPA-211ENST00000535709 STAG3Q9UJ98 1225 aa9.56□□□□□ -0.88
GYPA-211ENST00000535709 PRKAR2AP13861 404 aaKnown RBP9.55□□□□□ -0.88
GYPA-211ENST00000535709 PROM2Q8N271 834 aa9.51□□□□□ -0.89
GYPA-211ENST00000535709 HAX1O00165 279 aa9.44□□□□□ -0.9
GYPA-211ENST00000535709 CHADLQ6NUI6 762 aa9.43□□□□□ -0.9
GYPA-211ENST00000535709 SP7Q8TDD2 431 aaPredicted RBP9.43□□□□□ -0.9
GYPA-211ENST00000535709 C19orf67A6NJJ6 358 aa9.39□□□□□ -0.91
GYPA-211ENST00000535709 CREBZFQ9NS37 354 aa9.37□□□□□ -0.91
GYPA-211ENST00000535709 FARP1Q9Y4F1 1045 aaPredicted RBP9.37□□□□□ -0.91
GYPA-211ENST00000535709 FKBP8Q14318 412 aa9.35□□□□□ -0.91
GYPA-211ENST00000535709 EVX2Q03828 476 aa9.29□□□□□ -0.92
GYPA-211ENST00000535709 CD44P16070 742 aaKnown RBP9.27□□□□□ -0.93
GYPA-211ENST00000535709 NPM1P06748 294 aaKnown RBP eCLIP9.25□□□□□ -0.93
GYPA-211ENST00000535709 MNX1P50219 401 aaPredicted RBP9.24□□□□□ -0.93
GYPA-211ENST00000535709 PLEKHG5O94827 1062 aa9.23□□□□□ -0.93
GYPA-211ENST00000535709 CLCN6P51797 869 aa9.22□□□□□ -0.93
GYPA-211ENST00000535709 FBXO3Q9UK99 471 aa9.19□□□□□ -0.94
GYPA-211ENST00000535709 PAK3O75914 559 aaPredicted RBP9.18□□□□□ -0.94
GYPA-211ENST00000535709 ZNF579Q8NAF0 562 aaKnown RBP9.18□□□□□ -0.94
GYPA-211ENST00000535709 GABBR2O75899 941 aa9.16□□□□□ -0.94
GYPA-211ENST00000535709 MIER1Q8N108 512 aa9.16□□□□□ -0.94
GYPA-211ENST00000535709 ZBTB47Q9UFB7 747 aaPredicted RBP9.15□□□□□ -0.94
GYPA-211ENST00000535709 ZRANB1Q9UGI0 708 aa9.15□□□□□ -0.94
GYPA-211ENST00000535709 PLCD3Q8N3E9 789 aa9.14□□□□□ -0.95
GYPA-211ENST00000535709 VASPP50552 380 aaPredicted RBP9.03□□□□□ -0.96
GYPA-211ENST00000535709 PHF12Q96QT6 1004 aa9.02□□□□□ -0.97
GYPA-211ENST00000535709 CCDC61Q9Y6R9 512 aa9.01□□□□□ -0.97
GYPA-211ENST00000535709 RASEFQ8IZ41 740 aa9□□□□□ -0.97
GYPA-211ENST00000535709 TSPYL2Q9H2G4 693 aaPredicted RBP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms