RNA–Protein interactions for RNA: ENST00000535709.5

GYPA-211, Transcript of glycophorin A (MNS blood group), humanhuman


Gene GYPA, Length 695 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-211ENST00000535709 SF3B1O75533 1304 aaKnown RBP eCLIP4.33□□□□□ -1.723e-6■■■■■ 137.9
GYPA-211ENST00000535709 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.53□□□□□ -1.681e-7■■■■■ 33.2
GYPA-211ENST00000535709 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.77□□□□□ -1.656e-10■■■■■ 33.2
GYPA-211ENST00000535709 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.48□□□□□ -1.691e-6■■■■■ 31.9
GYPA-211ENST00000535709 SND1Q7KZF4 910 aaKnown RBP eCLIP6.36□□□□□ -1.393e-7■■■■□ 23.9
GYPA-211ENST00000535709 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.7□□□□□ -1.55e-6■■■□□ 18.6
GYPA-211ENST00000535709 RPS3P23396 243 aaKnown RBP eCLIP3.47□□□□□ -1.853e-8■■■□□ 17.8
GYPA-211ENST00000535709 HNRNPLP14866 589 aaKnown RBP eCLIP4.91□□□□□ -1.628e-7■■□□□ 13.7
GYPA-211ENST00000535709 SF3B4Q15427 424 aaKnown RBP eCLIP4.1□□□□□ -1.751e-7■■□□□ 13.1
GYPA-211ENST00000535709 AQRO60306 1485 aaKnown RBP eCLIP5.89□□□□□ -1.471e-6■□□□□ 9.4
GYPA-211ENST00000535709 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.61□□□□□ -1.511e-6■□□□□ 8.2
GYPA-211ENST00000535709 KHSRPQ92945 711 aaKnown RBP eCLIP7.88□□□□□ -1.151e-7■□□□□ 8.2
Retrieved 12 of 12 RNA–protein pairs in 5.6 ms