RNA–Protein interactions for RNA: ENST00000535327.5

CCDC7-207, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-207ENST00000535327 AEBP2Q6ZN18 517 aaPredicted RBP37.25■■■■□ 3.55
CCDC7-207ENST00000535327 CHIC1Q5VXU3 224 aa35.52■■■■□ 3.28
CCDC7-207ENST00000535327 SENP3Q9H4L4 574 aaPredicted RBP31.53■■■□□ 2.64
CCDC7-207ENST00000535327 PHF23Q9BUL5 403 aaPredicted RBP31.27■■■□□ 2.6
CCDC7-207ENST00000535327 FOXD1Q16676 465 aa29.5■■■□□ 2.31
CCDC7-207ENST00000535327 PLPPR3Q6T4P5 718 aa28.45■■■□□ 2.14
CCDC7-207ENST00000535327 PPP6R1Q9UPN7 881 aa27.87■■■□□ 2.05
CCDC7-207ENST00000535327 ADRA2BP18089 450 aa27.78■■■□□ 2.04
CCDC7-207ENST00000535327 PIAS4Q8N2W9 510 aaPredicted RBP27.58■■■□□ 2.01
CCDC7-207ENST00000535327 MSH5O43196 834 aa27.33■■□□□ 1.97
CCDC7-207ENST00000535327 POTEDQ86YR6 584 aa26.39■■□□□ 1.82
CCDC7-207ENST00000535327 MAPK8IP2Q13387 824 aaPredicted RBP25.48■■□□□ 1.67
CCDC7-207ENST00000535327 SCAF1Q9H7N4 1312 aaKnown RBP25.17■■□□□ 1.62
CCDC7-207ENST00000535327 DMRT2Q9Y5R5 561 aa25.1■■□□□ 1.61
CCDC7-207ENST00000535327 PPP4R3CPQ6ZMV5 832 aa25.04■■□□□ 1.6
CCDC7-207ENST00000535327 CNKSR2Q8WXI2 1034 aa24.44■■□□□ 1.5
CCDC7-207ENST00000535327 HOXD11P31277 338 aaPredicted RBP24.27■■□□□ 1.48
CCDC7-207ENST00000535327 RNF216Q9NWF9 866 aaPredicted RBP24.15■■□□□ 1.46
CCDC7-207ENST00000535327 DCAF8L1A6NGE4 600 aa24.12■■□□□ 1.45
CCDC7-207ENST00000535327 NCBP3Q53F19 620 aaKnown RBP24.04■■□□□ 1.44
CCDC7-207ENST00000535327 NPM3O75607 178 aaKnown RBP23.85■■□□□ 1.41
CCDC7-207ENST00000535327 KCNA4P22459 653 aa23.69■■□□□ 1.38
CCDC7-207ENST00000535327 RNF39Q9H2S5 420 aa23.43■■□□□ 1.34
CCDC7-207ENST00000535327 CACNB1Q02641 598 aaPredicted RBP23.37■■□□□ 1.33
CCDC7-207ENST00000535327 DNAJC5BQ9UF47 199 aa23.23■■□□□ 1.31
CCDC7-207ENST00000535327 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.14■■□□□ 1.29
CCDC7-207ENST00000535327 C1QBPQ07021 282 aaKnown RBP23.03■■□□□ 1.28
CCDC7-207ENST00000535327 U3KPZ7 1027 aaPredicted RBP22.75■■□□□ 1.23
CCDC7-207ENST00000535327 SLC4A2P04920 1241 aa22.74■■□□□ 1.23
CCDC7-207ENST00000535327 SPINK5Q9NQ38 1064 aaPredicted RBP22.39■■□□□ 1.17
CCDC7-207ENST00000535327 SLC4A1APQ9BWU0 796 aaKnown RBP22.34■■□□□ 1.17
CCDC7-207ENST00000535327 CAPN15O75808 1086 aa22.26■■□□□ 1.15
CCDC7-207ENST00000535327 DSG3P32926 999 aa22.07■■□□□ 1.12
CCDC7-207ENST00000535327 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22■■□□□ 1.11
CCDC7-207ENST00000535327 TRHP20396 242 aaPredicted RBP22■■□□□ 1.11
CCDC7-207ENST00000535327 HNRNPUL2Q1KMD3 747 aaKnown RBP22■■□□□ 1.11
CCDC7-207ENST00000535327 MYCNP04198 464 aaPredicted RBP21.95■■□□□ 1.1
CCDC7-207ENST00000535327 SAMD1Q6SPF0 538 aaPredicted RBP21.94■■□□□ 1.1
CCDC7-207ENST00000535327 FOXD4L1Q9NU39 408 aa21.9■■□□□ 1.1
CCDC7-207ENST00000535327 APLP2Q06481 763 aa21.89■■□□□ 1.09
CCDC7-207ENST00000535327 ZBTB22O15209 634 aa21.84■■□□□ 1.09
CCDC7-207ENST00000535327 ABCB7O75027 752 aa21.84■■□□□ 1.09
CCDC7-207ENST00000535327 ZNF219Q9P2Y4 722 aaPredicted RBP21.83■■□□□ 1.09
CCDC7-207ENST00000535327 ATF5Q9Y2D1 282 aaPredicted RBP21.62■■□□□ 1.05
CCDC7-207ENST00000535327 POLA2Q14181 598 aa21.46■■□□□ 1.03
CCDC7-207ENST00000535327 ATXN8OSP0DMR3 200 aa21.11■□□□□ 0.97
CCDC7-207ENST00000535327 CSRNP3Q8WYN3 585 aa21.04■□□□□ 0.96
CCDC7-207ENST00000535327 EHMT2Q96KQ7 1210 aa20.95■□□□□ 0.94
CCDC7-207ENST00000535327 RBM42Q9BTD8 480 aaKnown RBP20.89■□□□□ 0.93
CCDC7-207ENST00000535327 ZBTB12Q9Y330 459 aaPredicted RBP20.86■□□□□ 0.93
CCDC7-207ENST00000535327 OSCARQ8IYS5 282 aa20.79■□□□□ 0.92
CCDC7-207ENST00000535327 POTEHQ6S545 545 aa20.69■□□□□ 0.9
CCDC7-207ENST00000535327 MKRN4PQ13434 485 aaPredicted RBP20.6■□□□□ 0.89
CCDC7-207ENST00000535327 FBLN2P98095 1184 aa20.54■□□□□ 0.88
CCDC7-207ENST00000535327 AKT1S1Q96B36 256 aa20.53■□□□□ 0.88
CCDC7-207ENST00000535327 CHRDL2Q6WN34 429 aa20.44■□□□□ 0.86
CCDC7-207ENST00000535327 REM2Q8IYK8 340 aaPredicted RBP20.42■□□□□ 0.86
CCDC7-207ENST00000535327 SPDYE2BA6NHP3 402 aa20.31■□□□□ 0.84
CCDC7-207ENST00000535327 SPDYE6P0CI01 402 aa20.31■□□□□ 0.84
CCDC7-207ENST00000535327 SPDYE2Q495Y8 402 aa20.31■□□□□ 0.84
CCDC7-207ENST00000535327 PITPNM1O00562 1244 aa20.23■□□□□ 0.83
CCDC7-207ENST00000535327 ZNF692Q9BU19 519 aaPredicted RBP20.19■□□□□ 0.82
CCDC7-207ENST00000535327 SSUH2Q9Y2M2 353 aa20.13■□□□□ 0.81
CCDC7-207ENST00000535327 PIP4P2Q8N4L2 257 aa20.07■□□□□ 0.8
CCDC7-207ENST00000535327 FXR2P51116 673 aaKnown RBP eCLIP19.95■□□□□ 0.78
CCDC7-207ENST00000535327 CLEC11AQ9Y240 323 aa19.95■□□□□ 0.78
CCDC7-207ENST00000535327 PABPN1Q86U42 306 aaKnown RBP eCLIP19.93■□□□□ 0.78
CCDC7-207ENST00000535327 SPDYE1Q8NFV5 336 aaPredicted RBP19.89■□□□□ 0.77
CCDC7-207ENST00000535327 PRKAR2AP13861 404 aaKnown RBP19.69■□□□□ 0.74
CCDC7-207ENST00000535327 SPDYE4A6NLX3 237 aa19.68■□□□□ 0.74
CCDC7-207ENST00000535327 PRR29P0C7W0 189 aa19.61■□□□□ 0.73
CCDC7-207ENST00000535327 CHADLQ6NUI6 762 aa19.61■□□□□ 0.73
CCDC7-207ENST00000535327 HAX1O00165 279 aa19.6■□□□□ 0.73
CCDC7-207ENST00000535327 EVX2Q03828 476 aa19.51■□□□□ 0.71
CCDC7-207ENST00000535327 SP7Q8TDD2 431 aaPredicted RBP19.49■□□□□ 0.71
CCDC7-207ENST00000535327 C19orf67A6NJJ6 358 aa19.3■□□□□ 0.68
CCDC7-207ENST00000535327 STAG3Q9UJ98 1225 aa19.28■□□□□ 0.68
CCDC7-207ENST00000535327 CREBZFQ9NS37 354 aa19.25■□□□□ 0.67
CCDC7-207ENST00000535327 FARP1Q9Y4F1 1045 aaPredicted RBP19.25■□□□□ 0.67
CCDC7-207ENST00000535327 PROM2Q8N271 834 aa19.23■□□□□ 0.67
CCDC7-207ENST00000535327 CD44P16070 742 aaKnown RBP19.06■□□□□ 0.64
CCDC7-207ENST00000535327 FKBP8Q14318 412 aa19.04■□□□□ 0.64
CCDC7-207ENST00000535327 GABBR2O75899 941 aa18.98■□□□□ 0.63
CCDC7-207ENST00000535327 MNX1P50219 401 aaPredicted RBP18.97■□□□□ 0.63
CCDC7-207ENST00000535327 ZRANB1Q9UGI0 708 aa18.86■□□□□ 0.61
CCDC7-207ENST00000535327 NPM1P06748 294 aaKnown RBP eCLIP18.77■□□□□ 0.6
CCDC7-207ENST00000535327 MIER1Q8N108 512 aa18.74■□□□□ 0.59
CCDC7-207ENST00000535327 ZNF579Q8NAF0 562 aaKnown RBP18.74■□□□□ 0.59
CCDC7-207ENST00000535327 PHF12Q96QT6 1004 aa18.67■□□□□ 0.58
CCDC7-207ENST00000535327 POTEIP0CG38 1075 aa18.65■□□□□ 0.58
CCDC7-207ENST00000535327 PAK3O75914 559 aaPredicted RBP18.63■□□□□ 0.57
CCDC7-207ENST00000535327 GALR2O43603 387 aaPredicted RBP18.61■□□□□ 0.57
CCDC7-207ENST00000535327 PLCD3Q8N3E9 789 aa18.61■□□□□ 0.57
CCDC7-207ENST00000535327 TSPYL2Q9H2G4 693 aaPredicted RBP18.59■□□□□ 0.57
CCDC7-207ENST00000535327 PLEKHG5O94827 1062 aa18.56■□□□□ 0.56
CCDC7-207ENST00000535327 CLCN6P51797 869 aa18.53■□□□□ 0.56
CCDC7-207ENST00000535327 RASEFQ8IZ41 740 aa18.51■□□□□ 0.55
CCDC7-207ENST00000535327 DCBLD2Q96PD2 775 aa18.47■□□□□ 0.55
CCDC7-207ENST00000535327 CCDC61Q9Y6R9 512 aa18.46■□□□□ 0.55
CCDC7-207ENST00000535327 MS4A3Q96HJ5 214 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms