RNA–Protein interactions for RNA: ENST00000534756.1

LINC01493-203, Transcript of long intergenic non-protein coding RNA 1493, humanhuman

TSL 3 BASIC

Gene LINC01493, Length 509 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01493-203ENST00000534756 AEBP2Q6ZN18 517 aaPredicted RBP26.59■■□□□ 1.85
LINC01493-203ENST00000534756 CHIC1Q5VXU3 224 aa25.57■■□□□ 1.68
LINC01493-203ENST00000534756 PHF23Q9BUL5 403 aaPredicted RBP22.56■■□□□ 1.2
LINC01493-203ENST00000534756 SENP3Q9H4L4 574 aaPredicted RBP22.45■■□□□ 1.18
LINC01493-203ENST00000534756 FOXD1Q16676 465 aa21■□□□□ 0.95
LINC01493-203ENST00000534756 PLPPR3Q6T4P5 718 aa20.59■□□□□ 0.89
LINC01493-203ENST00000534756 PPP6R1Q9UPN7 881 aa20.05■□□□□ 0.8
LINC01493-203ENST00000534756 ADRA2BP18089 450 aa20.01■□□□□ 0.79
LINC01493-203ENST00000534756 PIAS4Q8N2W9 510 aaPredicted RBP19.7■□□□□ 0.74
LINC01493-203ENST00000534756 MSH5O43196 834 aa19.32■□□□□ 0.68
LINC01493-203ENST00000534756 POTEDQ86YR6 584 aa19.18■□□□□ 0.66
LINC01493-203ENST00000534756 MAPK8IP2Q13387 824 aaPredicted RBP18.28■□□□□ 0.52
LINC01493-203ENST00000534756 PPP4R3CPQ6ZMV5 832 aa18.19■□□□□ 0.5
LINC01493-203ENST00000534756 SCAF1Q9H7N4 1312 aaKnown RBP18.1■□□□□ 0.49
LINC01493-203ENST00000534756 DMRT2Q9Y5R5 561 aa17.91■□□□□ 0.46
LINC01493-203ENST00000534756 CNKSR2Q8WXI2 1034 aa17.67■□□□□ 0.42
LINC01493-203ENST00000534756 NCBP3Q53F19 620 aaKnown RBP17.52■□□□□ 0.4
LINC01493-203ENST00000534756 KCNA4P22459 653 aa17.5■□□□□ 0.39
LINC01493-203ENST00000534756 HOXD11P31277 338 aaPredicted RBP17.41■□□□□ 0.38
LINC01493-203ENST00000534756 NPM3O75607 178 aaKnown RBP17.38■□□□□ 0.37
LINC01493-203ENST00000534756 RNF216Q9NWF9 866 aaPredicted RBP17.38■□□□□ 0.37
LINC01493-203ENST00000534756 DCAF8L1A6NGE4 600 aa17.26■□□□□ 0.35
LINC01493-203ENST00000534756 DNAJC5BQ9UF47 199 aa16.71■□□□□ 0.27
LINC01493-203ENST00000534756 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.64■□□□□ 0.25
LINC01493-203ENST00000534756 RNF39Q9H2S5 420 aa16.6■□□□□ 0.25
LINC01493-203ENST00000534756 SLC4A1APQ9BWU0 796 aaKnown RBP16.55■□□□□ 0.24
LINC01493-203ENST00000534756 SLC4A2P04920 1241 aa16.51■□□□□ 0.23
LINC01493-203ENST00000534756 CACNB1Q02641 598 aaPredicted RBP16.42■□□□□ 0.22
LINC01493-203ENST00000534756 U3KPZ7 1027 aaPredicted RBP16.35■□□□□ 0.21
LINC01493-203ENST00000534756 C1QBPQ07021 282 aaKnown RBP16.32■□□□□ 0.2
LINC01493-203ENST00000534756 ZBTB22O15209 634 aa16.12■□□□□ 0.17
LINC01493-203ENST00000534756 FOXD4L1Q9NU39 408 aa16.07■□□□□ 0.16
LINC01493-203ENST00000534756 SPINK5Q9NQ38 1064 aaPredicted RBP16.05■□□□□ 0.16
LINC01493-203ENST00000534756 MYCNP04198 464 aaPredicted RBP15.98■□□□□ 0.15
LINC01493-203ENST00000534756 CAPN15O75808 1086 aa15.95■□□□□ 0.14
LINC01493-203ENST00000534756 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.88■□□□□ 0.13
LINC01493-203ENST00000534756 HNRNPUL2Q1KMD3 747 aaKnown RBP15.88■□□□□ 0.13
LINC01493-203ENST00000534756 SAMD1Q6SPF0 538 aaPredicted RBP15.86■□□□□ 0.13
LINC01493-203ENST00000534756 TRHP20396 242 aaPredicted RBP15.84■□□□□ 0.13
LINC01493-203ENST00000534756 EHMT2Q96KQ7 1210 aa15.84■□□□□ 0.13
LINC01493-203ENST00000534756 CSRNP3Q8WYN3 585 aa15.76■□□□□ 0.11
LINC01493-203ENST00000534756 APLP2Q06481 763 aa15.75■□□□□ 0.11
LINC01493-203ENST00000534756 ATF5Q9Y2D1 282 aaPredicted RBP15.75■□□□□ 0.11
LINC01493-203ENST00000534756 DSG3P32926 999 aa15.73■□□□□ 0.11
LINC01493-203ENST00000534756 ABCB7O75027 752 aa15.68■□□□□ 0.1
LINC01493-203ENST00000534756 ZNF219Q9P2Y4 722 aaPredicted RBP15.66■□□□□ 0.1
LINC01493-203ENST00000534756 POLA2Q14181 598 aa15.5■□□□□ 0.07
LINC01493-203ENST00000534756 ATXN8OSP0DMR3 200 aa15.47■□□□□ 0.07
LINC01493-203ENST00000534756 ZBTB12Q9Y330 459 aaPredicted RBP15.03■□□□□ -0
LINC01493-203ENST00000534756 MKRN4PQ13434 485 aaPredicted RBP15□□□□□ -0.01
LINC01493-203ENST00000534756 OSCARQ8IYS5 282 aa14.97□□□□□ -0.01
LINC01493-203ENST00000534756 FBLN2P98095 1184 aa14.94□□□□□ -0.02
LINC01493-203ENST00000534756 RBM42Q9BTD8 480 aaKnown RBP14.87□□□□□ -0.03
LINC01493-203ENST00000534756 POTEHQ6S545 545 aa14.78□□□□□ -0.04
LINC01493-203ENST00000534756 AKT1S1Q96B36 256 aa14.67□□□□□ -0.06
LINC01493-203ENST00000534756 SPDYE2BA6NHP3 402 aa14.66□□□□□ -0.06
LINC01493-203ENST00000534756 SPDYE6P0CI01 402 aa14.66□□□□□ -0.06
LINC01493-203ENST00000534756 SPDYE2Q495Y8 402 aa14.66□□□□□ -0.06
LINC01493-203ENST00000534756 ZNF692Q9BU19 519 aaPredicted RBP14.65□□□□□ -0.06
LINC01493-203ENST00000534756 REM2Q8IYK8 340 aaPredicted RBP14.62□□□□□ -0.07
LINC01493-203ENST00000534756 SSUH2Q9Y2M2 353 aa14.55□□□□□ -0.08
LINC01493-203ENST00000534756 CHRDL2Q6WN34 429 aa14.48□□□□□ -0.09
LINC01493-203ENST00000534756 SPDYE4A6NLX3 237 aa14.47□□□□□ -0.09
LINC01493-203ENST00000534756 PABPN1Q86U42 306 aaKnown RBP eCLIP14.47□□□□□ -0.09
LINC01493-203ENST00000534756 PITPNM1O00562 1244 aa14.46□□□□□ -0.09
LINC01493-203ENST00000534756 CLEC11AQ9Y240 323 aa14.38□□□□□ -0.11
LINC01493-203ENST00000534756 SPDYE1Q8NFV5 336 aaPredicted RBP14.31□□□□□ -0.12
LINC01493-203ENST00000534756 PIP4P2Q8N4L2 257 aa14.26□□□□□ -0.13
LINC01493-203ENST00000534756 FKBP8Q14318 412 aa14.25□□□□□ -0.13
LINC01493-203ENST00000534756 FXR2P51116 673 aaKnown RBP eCLIP14.2□□□□□ -0.14
LINC01493-203ENST00000534756 PRR29P0C7W0 189 aa14.16□□□□□ -0.14
LINC01493-203ENST00000534756 PROM2Q8N271 834 aa14.12□□□□□ -0.15
LINC01493-203ENST00000534756 CHADLQ6NUI6 762 aa14.1□□□□□ -0.15
LINC01493-203ENST00000534756 PRKAR2AP13861 404 aaKnown RBP14.09□□□□□ -0.15
LINC01493-203ENST00000534756 STAG3Q9UJ98 1225 aa14.03□□□□□ -0.16
LINC01493-203ENST00000534756 CREBZFQ9NS37 354 aa13.93□□□□□ -0.18
LINC01493-203ENST00000534756 HAX1O00165 279 aa13.89□□□□□ -0.19
LINC01493-203ENST00000534756 EVX2Q03828 476 aa13.85□□□□□ -0.19
LINC01493-203ENST00000534756 FARP1Q9Y4F1 1045 aaPredicted RBP13.85□□□□□ -0.19
LINC01493-203ENST00000534756 MIER1Q8N108 512 aa13.78□□□□□ -0.2
LINC01493-203ENST00000534756 MNX1P50219 401 aaPredicted RBP13.75□□□□□ -0.21
LINC01493-203ENST00000534756 C19orf67A6NJJ6 358 aa13.73□□□□□ -0.21
LINC01493-203ENST00000534756 PLCD3Q8N3E9 789 aa13.7□□□□□ -0.22
LINC01493-203ENST00000534756 FBXO3Q9UK99 471 aa13.68□□□□□ -0.22
LINC01493-203ENST00000534756 CD44P16070 742 aaKnown RBP13.65□□□□□ -0.22
LINC01493-203ENST00000534756 SP7Q8TDD2 431 aaPredicted RBP13.64□□□□□ -0.23
LINC01493-203ENST00000534756 PLEKHG5O94827 1062 aa13.6□□□□□ -0.23
LINC01493-203ENST00000534756 NPM1P06748 294 aaKnown RBP eCLIP13.6□□□□□ -0.23
LINC01493-203ENST00000534756 VASPP50552 380 aaPredicted RBP13.59□□□□□ -0.23
LINC01493-203ENST00000534756 ZRANB1Q9UGI0 708 aa13.56□□□□□ -0.24
LINC01493-203ENST00000534756 TSPYL2Q9H2G4 693 aaPredicted RBP13.51□□□□□ -0.25
LINC01493-203ENST00000534756 RASEFQ8IZ41 740 aa13.49□□□□□ -0.25
LINC01493-203ENST00000534756 GABBR2O75899 941 aa13.46□□□□□ -0.25
LINC01493-203ENST00000534756 KLHL34Q8N239 644 aa13.46□□□□□ -0.25
LINC01493-203ENST00000534756 IFNLR1Q8IU57 520 aaPredicted RBP13.45□□□□□ -0.26
LINC01493-203ENST00000534756 PHF12Q96QT6 1004 aa13.45□□□□□ -0.26
LINC01493-203ENST00000534756 PAK3O75914 559 aaPredicted RBP13.44□□□□□ -0.26
LINC01493-203ENST00000534756 NUBP1P53384 320 aa13.44□□□□□ -0.26
LINC01493-203ENST00000534756 ZBTB47Q9UFB7 747 aaPredicted RBP13.42□□□□□ -0.26
LINC01493-203ENST00000534756 ZNF579Q8NAF0 562 aaKnown RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms