RNA–Protein interactions for RNA: ENST00000534460.5

RCOR3-215, Transcript of REST corepressor 3, humanhuman

TSL 3

Gene RCOR3, Length 427 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCOR3-215ENST00000534460 AEBP2Q6ZN18 517 aaPredicted RBP25.42■■□□□ 1.66
RCOR3-215ENST00000534460 CHIC1Q5VXU3 224 aa24.58■■□□□ 1.53
RCOR3-215ENST00000534460 SENP3Q9H4L4 574 aaPredicted RBP21.64■■□□□ 1.05
RCOR3-215ENST00000534460 PHF23Q9BUL5 403 aaPredicted RBP21.59■■□□□ 1.05
RCOR3-215ENST00000534460 FOXD1Q16676 465 aa20.08■□□□□ 0.81
RCOR3-215ENST00000534460 PLPPR3Q6T4P5 718 aa19.84■□□□□ 0.77
RCOR3-215ENST00000534460 PPP6R1Q9UPN7 881 aa19.11■□□□□ 0.65
RCOR3-215ENST00000534460 ADRA2BP18089 450 aa19.04■□□□□ 0.64
RCOR3-215ENST00000534460 PIAS4Q8N2W9 510 aaPredicted RBP18.84■□□□□ 0.61
RCOR3-215ENST00000534460 MSH5O43196 834 aa18.66■□□□□ 0.58
RCOR3-215ENST00000534460 SCAF1Q9H7N4 1312 aaKnown RBP17.48■□□□□ 0.39
RCOR3-215ENST00000534460 POTEDQ86YR6 584 aa17.43■□□□□ 0.38
RCOR3-215ENST00000534460 PPP4R3CPQ6ZMV5 832 aa17.41■□□□□ 0.38
RCOR3-215ENST00000534460 MAPK8IP2Q13387 824 aaPredicted RBP17.35■□□□□ 0.37
RCOR3-215ENST00000534460 DMRT2Q9Y5R5 561 aa17.24■□□□□ 0.35
RCOR3-215ENST00000534460 CNKSR2Q8WXI2 1034 aa17.02■□□□□ 0.32
RCOR3-215ENST00000534460 NCBP3Q53F19 620 aaKnown RBP16.9■□□□□ 0.3
RCOR3-215ENST00000534460 HOXD11P31277 338 aaPredicted RBP16.79■□□□□ 0.28
RCOR3-215ENST00000534460 RNF216Q9NWF9 866 aaPredicted RBP16.78■□□□□ 0.28
RCOR3-215ENST00000534460 KCNA4P22459 653 aa16.69■□□□□ 0.26
RCOR3-215ENST00000534460 NPM3O75607 178 aaKnown RBP16.65■□□□□ 0.26
RCOR3-215ENST00000534460 DNAJC5BQ9UF47 199 aa16.37■□□□□ 0.21
RCOR3-215ENST00000534460 DCAF8L1A6NGE4 600 aa16.36■□□□□ 0.21
RCOR3-215ENST00000534460 RNF39Q9H2S5 420 aa15.97■□□□□ 0.15
RCOR3-215ENST00000534460 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.91■□□□□ 0.142e-6■□□□□ 10.2
RCOR3-215ENST00000534460 SLC4A1APQ9BWU0 796 aaKnown RBP15.84■□□□□ 0.13
RCOR3-215ENST00000534460 SLC4A2P04920 1241 aa15.8■□□□□ 0.12
RCOR3-215ENST00000534460 C1QBPQ07021 282 aaKnown RBP15.78■□□□□ 0.12
RCOR3-215ENST00000534460 CACNB1Q02641 598 aaPredicted RBP15.67■□□□□ 0.1
RCOR3-215ENST00000534460 U3KPZ7 1027 aaPredicted RBP15.66■□□□□ 0.1
RCOR3-215ENST00000534460 FOXD4L1Q9NU39 408 aa15.46■□□□□ 0.07
RCOR3-215ENST00000534460 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.41■□□□□ 0.06
RCOR3-215ENST00000534460 HNRNPUL2Q1KMD3 747 aaKnown RBP15.41■□□□□ 0.06
RCOR3-215ENST00000534460 MYCNP04198 464 aaPredicted RBP15.4■□□□□ 0.06
RCOR3-215ENST00000534460 ZBTB22O15209 634 aa15.37■□□□□ 0.05
RCOR3-215ENST00000534460 SAMD1Q6SPF0 538 aaPredicted RBP15.33■□□□□ 0.04
RCOR3-215ENST00000534460 APLP2Q06481 763 aa15.3■□□□□ 0.04
RCOR3-215ENST00000534460 SPINK5Q9NQ38 1064 aaPredicted RBP15.28■□□□□ 0.04
RCOR3-215ENST00000534460 CAPN15O75808 1086 aa15.2■□□□□ 0.02
RCOR3-215ENST00000534460 ZNF219Q9P2Y4 722 aaPredicted RBP15.13■□□□□ 0.01
RCOR3-215ENST00000534460 DSG3P32926 999 aa15.09■□□□□ 0.01
RCOR3-215ENST00000534460 CSRNP3Q8WYN3 585 aa15.06■□□□□ 0
RCOR3-215ENST00000534460 TRHP20396 242 aaPredicted RBP15.05■□□□□ -0
RCOR3-215ENST00000534460 ATXN8OSP0DMR3 200 aa15.02■□□□□ -0
RCOR3-215ENST00000534460 EHMT2Q96KQ7 1210 aa15□□□□□ -0.01
RCOR3-215ENST00000534460 ATF5Q9Y2D1 282 aaPredicted RBP14.97□□□□□ -0.01
RCOR3-215ENST00000534460 ABCB7O75027 752 aa14.86□□□□□ -0.03
RCOR3-215ENST00000534460 POLA2Q14181 598 aa14.79□□□□□ -0.04
RCOR3-215ENST00000534460 ZBTB12Q9Y330 459 aaPredicted RBP14.59□□□□□ -0.07
RCOR3-215ENST00000534460 RBM42Q9BTD8 480 aaKnown RBP14.39□□□□□ -0.11
RCOR3-215ENST00000534460 FBLN2P98095 1184 aa14.36□□□□□ -0.11
RCOR3-215ENST00000534460 MKRN4PQ13434 485 aaPredicted RBP14.33□□□□□ -0.12
RCOR3-215ENST00000534460 OSCARQ8IYS5 282 aa14.28□□□□□ -0.12
RCOR3-215ENST00000534460 SPDYE2BA6NHP3 402 aa14.17□□□□□ -0.14
RCOR3-215ENST00000534460 SPDYE6P0CI01 402 aa14.17□□□□□ -0.14
RCOR3-215ENST00000534460 SPDYE2Q495Y8 402 aa14.17□□□□□ -0.14
RCOR3-215ENST00000534460 AKT1S1Q96B36 256 aa14.16□□□□□ -0.14
RCOR3-215ENST00000534460 SSUH2Q9Y2M2 353 aa14.04□□□□□ -0.16
RCOR3-215ENST00000534460 ZNF692Q9BU19 519 aaPredicted RBP14.02□□□□□ -0.17
RCOR3-215ENST00000534460 REM2Q8IYK8 340 aaPredicted RBP14□□□□□ -0.17
RCOR3-215ENST00000534460 CHRDL2Q6WN34 429 aa13.87□□□□□ -0.19
RCOR3-215ENST00000534460 SPDYE4A6NLX3 237 aa13.86□□□□□ -0.19
RCOR3-215ENST00000534460 PITPNM1O00562 1244 aa13.82□□□□□ -0.2
RCOR3-215ENST00000534460 PABPN1Q86U42 306 aaKnown RBP eCLIP13.81□□□□□ -0.2
RCOR3-215ENST00000534460 SPDYE1Q8NFV5 336 aaPredicted RBP13.79□□□□□ -0.2
RCOR3-215ENST00000534460 POTEHQ6S545 545 aa13.74□□□□□ -0.21
RCOR3-215ENST00000534460 PROM2Q8N271 834 aa13.69□□□□□ -0.22
RCOR3-215ENST00000534460 FXR2P51116 673 aaKnown RBP eCLIP13.67□□□□□ -0.22
RCOR3-215ENST00000534460 CLEC11AQ9Y240 323 aa13.66□□□□□ -0.22
RCOR3-215ENST00000534460 PIP4P2Q8N4L2 257 aa13.63□□□□□ -0.23
RCOR3-215ENST00000534460 STAG3Q9UJ98 1225 aa13.59□□□□□ -0.23
RCOR3-215ENST00000534460 FKBP8Q14318 412 aa13.58□□□□□ -0.24
RCOR3-215ENST00000534460 PRR29P0C7W0 189 aa13.55□□□□□ -0.24
RCOR3-215ENST00000534460 PRKAR2AP13861 404 aaKnown RBP13.46□□□□□ -0.25
RCOR3-215ENST00000534460 CHADLQ6NUI6 762 aa13.36□□□□□ -0.27
RCOR3-215ENST00000534460 CREBZFQ9NS37 354 aa13.34□□□□□ -0.27
RCOR3-215ENST00000534460 FARP1Q9Y4F1 1045 aaPredicted RBP13.28□□□□□ -0.28
RCOR3-215ENST00000534460 FBXO3Q9UK99 471 aa13.24□□□□□ -0.29
RCOR3-215ENST00000534460 HAX1O00165 279 aa13.22□□□□□ -0.29
RCOR3-215ENST00000534460 C19orf67A6NJJ6 358 aa13.21□□□□□ -0.29
RCOR3-215ENST00000534460 MNX1P50219 401 aaPredicted RBP13.21□□□□□ -0.29
RCOR3-215ENST00000534460 MIER1Q8N108 512 aa13.14□□□□□ -0.31
RCOR3-215ENST00000534460 EVX2Q03828 476 aa13.12□□□□□ -0.31
RCOR3-215ENST00000534460 PLEKHG5O94827 1062 aa13.11□□□□□ -0.31
RCOR3-215ENST00000534460 NPM1P06748 294 aaKnown RBP eCLIP13.11□□□□□ -0.31
RCOR3-215ENST00000534460 SP7Q8TDD2 431 aaPredicted RBP13.1□□□□□ -0.31
RCOR3-215ENST00000534460 PLCD3Q8N3E9 789 aa13.08□□□□□ -0.32
RCOR3-215ENST00000534460 CD44P16070 742 aaKnown RBP13.06□□□□□ -0.32
RCOR3-215ENST00000534460 VASPP50552 380 aaPredicted RBP13.04□□□□□ -0.32
RCOR3-215ENST00000534460 ZBTB47Q9UFB7 747 aaPredicted RBP13.04□□□□□ -0.32
RCOR3-215ENST00000534460 PAK3O75914 559 aaPredicted RBP12.93□□□□□ -0.34
RCOR3-215ENST00000534460 CLCN6P51797 869 aa12.93□□□□□ -0.34
RCOR3-215ENST00000534460 ZNF579Q8NAF0 562 aaKnown RBP12.93□□□□□ -0.34
RCOR3-215ENST00000534460 ZRANB1Q9UGI0 708 aa12.92□□□□□ -0.34
RCOR3-215ENST00000534460 NUBP1P53384 320 aa12.9□□□□□ -0.34
RCOR3-215ENST00000534460 RASEFQ8IZ41 740 aa12.88□□□□□ -0.35
RCOR3-215ENST00000534460 GABBR2O75899 941 aa12.86□□□□□ -0.35
RCOR3-215ENST00000534460 IFNLR1Q8IU57 520 aaPredicted RBP12.85□□□□□ -0.35
RCOR3-215ENST00000534460 KLHL34Q8N239 644 aa12.82□□□□□ -0.36
RCOR3-215ENST00000534460 TSPYL2Q9H2G4 693 aaPredicted RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 113.5 ms