RNA–Protein interactions for RNA: ENST00000533043.1

NPM1P35-201, Transcript of nucleophosmin 1 pseudogene 35, humanhuman

BASIC

Gene NPM1P35, Length 868 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1P35-201ENST00000533043 AEBP2Q6ZN18 517 aaPredicted RBP27.66■■■□□ 2.02
NPM1P35-201ENST00000533043 CHIC1Q5VXU3 224 aa26.96■■□□□ 1.91
NPM1P35-201ENST00000533043 PHF23Q9BUL5 403 aaPredicted RBP23.68■■□□□ 1.38
NPM1P35-201ENST00000533043 SENP3Q9H4L4 574 aaPredicted RBP23.51■■□□□ 1.35
NPM1P35-201ENST00000533043 PLPPR3Q6T4P5 718 aa21.86■■□□□ 1.09
NPM1P35-201ENST00000533043 FOXD1Q16676 465 aa21.8■■□□□ 1.08
NPM1P35-201ENST00000533043 PPP6R1Q9UPN7 881 aa20.9■□□□□ 0.94
NPM1P35-201ENST00000533043 ADRA2BP18089 450 aa20.88■□□□□ 0.93
NPM1P35-201ENST00000533043 PIAS4Q8N2W9 510 aaPredicted RBP20.54■□□□□ 0.88
NPM1P35-201ENST00000533043 MSH5O43196 834 aa20.16■□□□□ 0.82
NPM1P35-201ENST00000533043 PPP4R3CPQ6ZMV5 832 aa19.24■□□□□ 0.67
NPM1P35-201ENST00000533043 SCAF1Q9H7N4 1312 aaKnown RBP19.14■□□□□ 0.65
NPM1P35-201ENST00000533043 MAPK8IP2Q13387 824 aaPredicted RBP18.95■□□□□ 0.62
NPM1P35-201ENST00000533043 DMRT2Q9Y5R5 561 aa18.75■□□□□ 0.59
NPM1P35-201ENST00000533043 NCBP3Q53F19 620 aaKnown RBP18.73■□□□□ 0.59
NPM1P35-201ENST00000533043 CNKSR2Q8WXI2 1034 aa18.73■□□□□ 0.59
NPM1P35-201ENST00000533043 KCNA4P22459 653 aa18.7■□□□□ 0.58
NPM1P35-201ENST00000533043 POTEDQ86YR6 584 aa18.47■□□□□ 0.55
NPM1P35-201ENST00000533043 NPM3O75607 178 aaKnown RBP18.43■□□□□ 0.54
NPM1P35-201ENST00000533043 RNF216Q9NWF9 866 aaPredicted RBP18.39■□□□□ 0.53
NPM1P35-201ENST00000533043 HOXD11P31277 338 aaPredicted RBP18.35■□□□□ 0.53
NPM1P35-201ENST00000533043 DNAJC5BQ9UF47 199 aa18■□□□□ 0.47
NPM1P35-201ENST00000533043 DCAF8L1A6NGE4 600 aa17.88■□□□□ 0.45
NPM1P35-201ENST00000533043 SLC4A1APQ9BWU0 796 aaKnown RBP17.8■□□□□ 0.44
NPM1P35-201ENST00000533043 SLC4A2P04920 1241 aa17.44■□□□□ 0.38
NPM1P35-201ENST00000533043 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.44■□□□□ 0.38
NPM1P35-201ENST00000533043 RNF39Q9H2S5 420 aa17.27■□□□□ 0.36
NPM1P35-201ENST00000533043 FOXD4L1Q9NU39 408 aa17.25■□□□□ 0.35
NPM1P35-201ENST00000533043 ZBTB22O15209 634 aa17.21■□□□□ 0.35
NPM1P35-201ENST00000533043 EHMT2Q96KQ7 1210 aa17.17■□□□□ 0.34
NPM1P35-201ENST00000533043 U3KPZ7 1027 aaPredicted RBP17.17■□□□□ 0.34
NPM1P35-201ENST00000533043 MYCNP04198 464 aaPredicted RBP17.06■□□□□ 0.32
NPM1P35-201ENST00000533043 C1QBPQ07021 282 aaKnown RBP17.06■□□□□ 0.32
NPM1P35-201ENST00000533043 CSRNP3Q8WYN3 585 aa17.04■□□□□ 0.32
NPM1P35-201ENST00000533043 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.95■□□□□ 0.3
NPM1P35-201ENST00000533043 HNRNPUL2Q1KMD3 747 aaKnown RBP16.95■□□□□ 0.3
NPM1P35-201ENST00000533043 SAMD1Q6SPF0 538 aaPredicted RBP16.88■□□□□ 0.29
NPM1P35-201ENST00000533043 CACNB1Q02641 598 aaPredicted RBP16.84■□□□□ 0.29
NPM1P35-201ENST00000533043 APLP2Q06481 763 aa16.8■□□□□ 0.28
NPM1P35-201ENST00000533043 SPINK5Q9NQ38 1064 aaPredicted RBP16.69■□□□□ 0.26
NPM1P35-201ENST00000533043 ATXN8OSP0DMR3 200 aa16.68■□□□□ 0.26
NPM1P35-201ENST00000533043 CAPN15O75808 1086 aa16.62■□□□□ 0.25
NPM1P35-201ENST00000533043 ATF5Q9Y2D1 282 aaPredicted RBP16.57■□□□□ 0.24
NPM1P35-201ENST00000533043 ZNF219Q9P2Y4 722 aaPredicted RBP16.56■□□□□ 0.24
NPM1P35-201ENST00000533043 TRHP20396 242 aaPredicted RBP16.51■□□□□ 0.23
NPM1P35-201ENST00000533043 DSG3P32926 999 aa16.38■□□□□ 0.21
NPM1P35-201ENST00000533043 ABCB7O75027 752 aa16.29■□□□□ 0.2
NPM1P35-201ENST00000533043 POLA2Q14181 598 aa16.25■□□□□ 0.19
NPM1P35-201ENST00000533043 ZBTB12Q9Y330 459 aaPredicted RBP16.03■□□□□ 0.16
NPM1P35-201ENST00000533043 FBLN2P98095 1184 aa15.9■□□□□ 0.14
NPM1P35-201ENST00000533043 MKRN4PQ13434 485 aaPredicted RBP15.87■□□□□ 0.13
NPM1P35-201ENST00000533043 OSCARQ8IYS5 282 aa15.71■□□□□ 0.11
NPM1P35-201ENST00000533043 RBM42Q9BTD8 480 aaKnown RBP15.64■□□□□ 0.09
NPM1P35-201ENST00000533043 SPDYE2BA6NHP3 402 aa15.57■□□□□ 0.08
NPM1P35-201ENST00000533043 SPDYE6P0CI01 402 aa15.57■□□□□ 0.08
NPM1P35-201ENST00000533043 SPDYE2Q495Y8 402 aa15.57■□□□□ 0.08
NPM1P35-201ENST00000533043 SPDYE4A6NLX3 237 aa15.47■□□□□ 0.07
NPM1P35-201ENST00000533043 ZNF692Q9BU19 519 aaPredicted RBP15.47■□□□□ 0.07
NPM1P35-201ENST00000533043 SSUH2Q9Y2M2 353 aa15.46■□□□□ 0.07
NPM1P35-201ENST00000533043 AKT1S1Q96B36 256 aa15.42■□□□□ 0.06
NPM1P35-201ENST00000533043 FKBP8Q14318 412 aa15.4■□□□□ 0.06
NPM1P35-201ENST00000533043 PABPN1Q86U42 306 aaKnown RBP eCLIP15.26■□□□□ 0.03
NPM1P35-201ENST00000533043 REM2Q8IYK8 340 aaPredicted RBP15.26■□□□□ 0.03
NPM1P35-201ENST00000533043 PROM2Q8N271 834 aa15.26■□□□□ 0.03
NPM1P35-201ENST00000533043 SPDYE1Q8NFV5 336 aaPredicted RBP15.12■□□□□ 0.01
NPM1P35-201ENST00000533043 PITPNM1O00562 1244 aa15.09■□□□□ 0.01
NPM1P35-201ENST00000533043 STAG3Q9UJ98 1225 aa15.03■□□□□ -0
NPM1P35-201ENST00000533043 CLEC11AQ9Y240 323 aa15.01□□□□□ -0.01
NPM1P35-201ENST00000533043 CHRDL2Q6WN34 429 aa15□□□□□ -0.01
NPM1P35-201ENST00000533043 FBXO3Q9UK99 471 aa14.9□□□□□ -0.02
NPM1P35-201ENST00000533043 PRR29P0C7W0 189 aa14.89□□□□□ -0.03
NPM1P35-201ENST00000533043 FXR2P51116 673 aaKnown RBP eCLIP14.83□□□□□ -0.04
NPM1P35-201ENST00000533043 PIP4P2Q8N4L2 257 aa14.79□□□□□ -0.04
NPM1P35-201ENST00000533043 VASPP50552 380 aaPredicted RBP14.7□□□□□ -0.06
NPM1P35-201ENST00000533043 CREBZFQ9NS37 354 aa14.7□□□□□ -0.06
NPM1P35-201ENST00000533043 PRKAR2AP13861 404 aaKnown RBP14.69□□□□□ -0.06
NPM1P35-201ENST00000533043 CHADLQ6NUI6 762 aa14.66□□□□□ -0.06
NPM1P35-201ENST00000533043 MIER1Q8N108 512 aa14.65□□□□□ -0.06
NPM1P35-201ENST00000533043 PLCD3Q8N3E9 789 aa14.63□□□□□ -0.07
NPM1P35-201ENST00000533043 PLEKHG5O94827 1062 aa14.6□□□□□ -0.07
NPM1P35-201ENST00000533043 POTEHQ6S545 545 aa14.6□□□□□ -0.07
NPM1P35-201ENST00000533043 MNX1P50219 401 aaPredicted RBP14.55□□□□□ -0.08
NPM1P35-201ENST00000533043 FARP1Q9Y4F1 1045 aaPredicted RBP14.55□□□□□ -0.08
NPM1P35-201ENST00000533043 ZBTB47Q9UFB7 747 aaPredicted RBP14.51□□□□□ -0.09
NPM1P35-201ENST00000533043 IFNLR1Q8IU57 520 aaPredicted RBP14.48□□□□□ -0.09
NPM1P35-201ENST00000533043 NPM1P06748 294 aaKnown RBP eCLIP14.45□□□□□ -0.1
NPM1P35-201ENST00000533043 KLHL34Q8N239 644 aa14.42□□□□□ -0.1
NPM1P35-201ENST00000533043 C19orf67A6NJJ6 358 aa14.33□□□□□ -0.12
NPM1P35-201ENST00000533043 SPOCK2Q92563 424 aa14.33□□□□□ -0.12
NPM1P35-201ENST00000533043 NUBP1P53384 320 aa14.32□□□□□ -0.12
NPM1P35-201ENST00000533043 HAX1O00165 279 aa14.31□□□□□ -0.12
NPM1P35-201ENST00000533043 CD44P16070 742 aaKnown RBP14.28□□□□□ -0.12
NPM1P35-201ENST00000533043 RASEFQ8IZ41 740 aa14.27□□□□□ -0.13
NPM1P35-201ENST00000533043 PAK3O75914 559 aaPredicted RBP14.22□□□□□ -0.13
NPM1P35-201ENST00000533043 FAM212AQ96EL1 285 aa14.21□□□□□ -0.13
NPM1P35-201ENST00000533043 EVX2Q03828 476 aa14.19□□□□□ -0.14
NPM1P35-201ENST00000533043 TSPYL2Q9H2G4 693 aaPredicted RBP14.18□□□□□ -0.14
NPM1P35-201ENST00000533043 ZRANB1Q9UGI0 708 aa14.18□□□□□ -0.14
NPM1P35-201ENST00000533043 GSE1Q14687 1217 aa14.15□□□□□ -0.14
NPM1P35-201ENST00000533043 DCAF8Q5TAQ9 597 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms