RNA–Protein interactions for RNA: ENST00000532996.5

ARHGAP28-207, Transcript of Rho GTPase activating protein 28, humanhuman

TSL 1 (best) BASIC

Gene ARHGAP28, Length 1,859 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGAP28-207ENST00000532996 AEBP2Q6ZN18 517 aaPredicted RBP20.31■□□□□ 0.84
ARHGAP28-207ENST00000532996 CHIC1Q5VXU3 224 aa20.13■□□□□ 0.81
ARHGAP28-207ENST00000532996 PHF23Q9BUL5 403 aaPredicted RBP17.81■□□□□ 0.44
ARHGAP28-207ENST00000532996 SENP3Q9H4L4 574 aaPredicted RBP17.06■□□□□ 0.32
ARHGAP28-207ENST00000532996 PLPPR3Q6T4P5 718 aa16.47■□□□□ 0.23
ARHGAP28-207ENST00000532996 FOXD1Q16676 465 aa15.86■□□□□ 0.13
ARHGAP28-207ENST00000532996 PPP6R1Q9UPN7 881 aa15.6■□□□□ 0.09
ARHGAP28-207ENST00000532996 ADRA2BP18089 450 aa15.58■□□□□ 0.08
ARHGAP28-207ENST00000532996 PIAS4Q8N2W9 510 aaPredicted RBP15.01□□□□□ -0.01
ARHGAP28-207ENST00000532996 KCNA4P22459 653 aa14.73□□□□□ -0.05
ARHGAP28-207ENST00000532996 PPP4R3CPQ6ZMV5 832 aa14.59□□□□□ -0.07
ARHGAP28-207ENST00000532996 MSH5O43196 834 aa14.39□□□□□ -0.11
ARHGAP28-207ENST00000532996 NCBP3Q53F19 620 aaKnown RBP14.23□□□□□ -0.13
ARHGAP28-207ENST00000532996 NPM3O75607 178 aaKnown RBP14.14□□□□□ -0.15
ARHGAP28-207ENST00000532996 SCAF1Q9H7N4 1312 aaKnown RBP14.11□□□□□ -0.15
ARHGAP28-207ENST00000532996 EHMT2Q96KQ7 1210 aa14.1□□□□□ -0.15
ARHGAP28-207ENST00000532996 CNKSR2Q8WXI2 1034 aa14.07□□□□□ -0.16
ARHGAP28-207ENST00000532996 MAPK8IP2Q13387 824 aaPredicted RBP14.04□□□□□ -0.16
ARHGAP28-207ENST00000532996 SLC4A1APQ9BWU0 796 aaKnown RBP14.03□□□□□ -0.16
ARHGAP28-207ENST00000532996 CSRNP3Q8WYN3 585 aa13.79□□□□□ -0.2
ARHGAP28-207ENST00000532996 DMRT2Q9Y5R5 561 aa13.71□□□□□ -0.21
ARHGAP28-207ENST00000532996 RNF216Q9NWF9 866 aaPredicted RBP13.7□□□□□ -0.22
ARHGAP28-207ENST00000532996 DNAJC5BQ9UF47 199 aa13.62□□□□□ -0.23
ARHGAP28-207ENST00000532996 ZBTB22O15209 634 aa13.61□□□□□ -0.23
ARHGAP28-207ENST00000532996 HOXD11P31277 338 aaPredicted RBP13.57□□□□□ -0.24
ARHGAP28-207ENST00000532996 FOXD4L1Q9NU39 408 aa13.38□□□□□ -0.27
ARHGAP28-207ENST00000532996 POTEDQ86YR6 584 aa13.36□□□□□ -0.27
ARHGAP28-207ENST00000532996 SLC4A2P04920 1241 aa13.28□□□□□ -0.28
ARHGAP28-207ENST00000532996 DCAF8L1A6NGE4 600 aa13.07□□□□□ -0.32
ARHGAP28-207ENST00000532996 MYCNP04198 464 aaPredicted RBP13□□□□□ -0.33
ARHGAP28-207ENST00000532996 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.89□□□□□ -0.35
ARHGAP28-207ENST00000532996 ATXN8OSP0DMR3 200 aa12.85□□□□□ -0.35
ARHGAP28-207ENST00000532996 U3KPZ7 1027 aaPredicted RBP12.8□□□□□ -0.36
ARHGAP28-207ENST00000532996 ATF5Q9Y2D1 282 aaPredicted RBP12.73□□□□□ -0.37
ARHGAP28-207ENST00000532996 SAMD1Q6SPF0 538 aaPredicted RBP12.65□□□□□ -0.38
ARHGAP28-207ENST00000532996 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.64□□□□□ -0.39
ARHGAP28-207ENST00000532996 HNRNPUL2Q1KMD3 747 aaKnown RBP12.64□□□□□ -0.39
ARHGAP28-207ENST00000532996 RNF39Q9H2S5 420 aa12.42□□□□□ -0.42
ARHGAP28-207ENST00000532996 FKBP8Q14318 412 aa12.4□□□□□ -0.42
ARHGAP28-207ENST00000532996 ZNF219Q9P2Y4 722 aaPredicted RBP12.4□□□□□ -0.42
ARHGAP28-207ENST00000532996 APLP2Q06481 763 aa12.38□□□□□ -0.43
ARHGAP28-207ENST00000532996 SPINK5Q9NQ38 1064 aaPredicted RBP12.35□□□□□ -0.43
ARHGAP28-207ENST00000532996 TRHP20396 242 aaPredicted RBP12.25□□□□□ -0.45
ARHGAP28-207ENST00000532996 C1QBPQ07021 282 aaKnown RBP12.24□□□□□ -0.45
ARHGAP28-207ENST00000532996 CAPN15O75808 1086 aa12.21□□□□□ -0.45
ARHGAP28-207ENST00000532996 MKRN4PQ13434 485 aaPredicted RBP12.18□□□□□ -0.46
ARHGAP28-207ENST00000532996 POLA2Q14181 598 aa12.15□□□□□ -0.46
ARHGAP28-207ENST00000532996 ABCB7O75027 752 aa12.06□□□□□ -0.48
ARHGAP28-207ENST00000532996 FBLN2P98095 1184 aa12.02□□□□□ -0.48
ARHGAP28-207ENST00000532996 SPDYE4A6NLX3 237 aa12.02□□□□□ -0.49
ARHGAP28-207ENST00000532996 RTN4Q9NQC3 1192 aaKnown RBP11.98□□□□□ -0.49
ARHGAP28-207ENST00000532996 DSG3P32926 999 aa11.96□□□□□ -0.49
ARHGAP28-207ENST00000532996 AMER1Q5JTC6 1135 aaPredicted RBP11.91□□□□□ -0.5
ARHGAP28-207ENST00000532996 PROM2Q8N271 834 aa11.91□□□□□ -0.5
ARHGAP28-207ENST00000532996 ZBTB12Q9Y330 459 aaPredicted RBP11.9□□□□□ -0.5
ARHGAP28-207ENST00000532996 CACNB1Q02641 598 aaPredicted RBP11.78□□□□□ -0.52
ARHGAP28-207ENST00000532996 FBXO3Q9UK99 471 aa11.78□□□□□ -0.52
ARHGAP28-207ENST00000532996 OSCARQ8IYS5 282 aa11.76□□□□□ -0.53
ARHGAP28-207ENST00000532996 VASPP50552 380 aaPredicted RBP11.68□□□□□ -0.54
ARHGAP28-207ENST00000532996 ZNF692Q9BU19 519 aaPredicted RBP11.68□□□□□ -0.54
ARHGAP28-207ENST00000532996 SPDYE2BA6NHP3 402 aa11.65□□□□□ -0.54
ARHGAP28-207ENST00000532996 SPDYE6P0CI01 402 aa11.65□□□□□ -0.54
ARHGAP28-207ENST00000532996 SPDYE2Q495Y8 402 aa11.65□□□□□ -0.54
ARHGAP28-207ENST00000532996 SSUH2Q9Y2M2 353 aa11.65□□□□□ -0.54
ARHGAP28-207ENST00000532996 IFNLR1Q8IU57 520 aaPredicted RBP11.59□□□□□ -0.55
ARHGAP28-207ENST00000532996 PABPN1Q86U42 306 aaKnown RBP eCLIP11.55□□□□□ -0.56
ARHGAP28-207ENST00000532996 STAG3Q9UJ98 1225 aa11.43□□□□□ -0.58
ARHGAP28-207ENST00000532996 SLC24A1O60721 1099 aa11.38□□□□□ -0.59
ARHGAP28-207ENST00000532996 PKD2Q13563 968 aa11.35□□□□□ -0.59
ARHGAP28-207ENST00000532996 KLHL34Q8N239 644 aa11.34□□□□□ -0.59
ARHGAP28-207ENST00000532996 PLCD3Q8N3E9 789 aa11.34□□□□□ -0.59
ARHGAP28-207ENST00000532996 MIER1Q8N108 512 aa11.32□□□□□ -0.6
ARHGAP28-207ENST00000532996 SPOCK2Q92563 424 aa11.32□□□□□ -0.6
ARHGAP28-207ENST00000532996 RBM42Q9BTD8 480 aaKnown RBP11.29□□□□□ -0.6
ARHGAP28-207ENST00000532996 AKT1S1Q96B36 256 aa11.27□□□□□ -0.6
ARHGAP28-207ENST00000532996 SPDYE1Q8NFV5 336 aaPredicted RBP11.21□□□□□ -0.62
ARHGAP28-207ENST00000532996 REM2Q8IYK8 340 aaPredicted RBP11.2□□□□□ -0.62
ARHGAP28-207ENST00000532996 PLEKHG5O94827 1062 aa11.17□□□□□ -0.62
ARHGAP28-207ENST00000532996 CLEC11AQ9Y240 323 aa11.17□□□□□ -0.62
ARHGAP28-207ENST00000532996 DCAF8L2P0C7V8 631 aa11.16□□□□□ -0.62
ARHGAP28-207ENST00000532996 ECM2O94769 699 aaPredicted RBP11.15□□□□□ -0.62
ARHGAP28-207ENST00000532996 ZBTB47Q9UFB7 747 aaPredicted RBP11.15□□□□□ -0.63
ARHGAP28-207ENST00000532996 CREBZFQ9NS37 354 aa11.1□□□□□ -0.63
ARHGAP28-207ENST00000532996 PRR29P0C7W0 189 aa11.1□□□□□ -0.63
ARHGAP28-207ENST00000532996 PITPNM1O00562 1244 aa11.09□□□□□ -0.63
ARHGAP28-207ENST00000532996 RGL2O15211 777 aa11.08□□□□□ -0.64
ARHGAP28-207ENST00000532996 CIZ1Q9ULV3 898 aaPredicted RBP11.08□□□□□ -0.64
ARHGAP28-207ENST00000532996 MNX1P50219 401 aaPredicted RBP11.07□□□□□ -0.64
ARHGAP28-207ENST00000532996 NUBP1P53384 320 aa11.06□□□□□ -0.64
ARHGAP28-207ENST00000532996 PLCB2Q00722 1185 aa11.06□□□□□ -0.64
ARHGAP28-207ENST00000532996 NPM1P06748 294 aaKnown RBP eCLIP11.02□□□□□ -0.65
ARHGAP28-207ENST00000532996 GSE1Q14687 1217 aa10.95□□□□□ -0.66
ARHGAP28-207ENST00000532996 RNF25Q96BH1 459 aaPredicted RBP10.94□□□□□ -0.66
ARHGAP28-207ENST00000532996 TRIM41Q8WV44 630 aa10.93□□□□□ -0.66
ARHGAP28-207ENST00000532996 RASEFQ8IZ41 740 aa10.93□□□□□ -0.66
ARHGAP28-207ENST00000532996 DCAF8Q5TAQ9 597 aa10.92□□□□□ -0.66
ARHGAP28-207ENST00000532996 CHADLQ6NUI6 762 aa10.91□□□□□ -0.66
ARHGAP28-207ENST00000532996 BBXQ8WY36 941 aaPredicted RBP10.91□□□□□ -0.66
ARHGAP28-207ENST00000532996 FAM212AQ96EL1 285 aa10.89□□□□□ -0.67
ARHGAP28-207ENST00000532996 HAP1P54257 671 aaPredicted RBP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms