RNA–Protein interactions for RNA: ENST00000532556.1

RSF1-211, Transcript of remodeling and spacing factor 1, humanhuman

TSL 3

Gene RSF1, Length 495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RSF1-211ENST00000532556 AEBP2Q6ZN18 517 aaPredicted RBP27.78■■■□□ 2.04
RSF1-211ENST00000532556 CHIC1Q5VXU3 224 aa26.06■■□□□ 1.76
RSF1-211ENST00000532556 SENP3Q9H4L4 574 aaPredicted RBP23.96■■□□□ 1.43
RSF1-211ENST00000532556 PHF23Q9BUL5 403 aaPredicted RBP23.45■■□□□ 1.34
RSF1-211ENST00000532556 FOXD1Q16676 465 aa22.36■■□□□ 1.17
RSF1-211ENST00000532556 POTEDQ86YR6 584 aa22.3■■□□□ 1.16
RSF1-211ENST00000532556 MSH5O43196 834 aa21.37■■□□□ 1.01
RSF1-211ENST00000532556 PIAS4Q8N2W9 510 aaPredicted RBP20.67■□□□□ 0.9
RSF1-211ENST00000532556 PPP6R1Q9UPN7 881 aa20.17■□□□□ 0.82
RSF1-211ENST00000532556 PLPPR3Q6T4P5 718 aa20.07■□□□□ 0.8
RSF1-211ENST00000532556 ADRA2BP18089 450 aa20.04■□□□□ 0.8
RSF1-211ENST00000532556 DMRT2Q9Y5R5 561 aa18.84■□□□□ 0.61
RSF1-211ENST00000532556 CACNB1Q02641 598 aaPredicted RBP18.8■□□□□ 0.6
RSF1-211ENST00000532556 MAPK8IP2Q13387 824 aaPredicted RBP18.66■□□□□ 0.58
RSF1-211ENST00000532556 SCAF1Q9H7N4 1312 aaKnown RBP18.5■□□□□ 0.55
RSF1-211ENST00000532556 RNF39Q9H2S5 420 aa18.12■□□□□ 0.49
RSF1-211ENST00000532556 DCAF8L1A6NGE4 600 aa17.98■□□□□ 0.47
RSF1-211ENST00000532556 C1QBPQ07021 282 aaKnown RBP17.85■□□□□ 0.45
RSF1-211ENST00000532556 HOXD11P31277 338 aaPredicted RBP17.83■□□□□ 0.44
RSF1-211ENST00000532556 DNAJC5BQ9UF47 199 aa17.52■□□□□ 0.4
RSF1-211ENST00000532556 RNF216Q9NWF9 866 aaPredicted RBP17.45■□□□□ 0.38
RSF1-211ENST00000532556 PPP4R3CPQ6ZMV5 832 aa17.42■□□□□ 0.38
RSF1-211ENST00000532556 CNKSR2Q8WXI2 1034 aa17.36■□□□□ 0.37
RSF1-211ENST00000532556 POTEHQ6S545 545 aa17.31■□□□□ 0.36
RSF1-211ENST00000532556 KCNA4P22459 653 aa17.12■□□□□ 0.33
RSF1-211ENST00000532556 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.9■□□□□ 0.35e-10■■□□□ 12.6
RSF1-211ENST00000532556 NCBP3Q53F19 620 aaKnown RBP16.68■□□□□ 0.26
RSF1-211ENST00000532556 DSG3P32926 999 aa16.64■□□□□ 0.25
RSF1-211ENST00000532556 EHMT2Q96KQ7 1210 aa16.51■□□□□ 0.23
RSF1-211ENST00000532556 CAPN15O75808 1086 aa16.46■□□□□ 0.23
RSF1-211ENST00000532556 U3KPZ7 1027 aaPredicted RBP16.44■□□□□ 0.22
RSF1-211ENST00000532556 NPM3O75607 178 aaKnown RBP16.43■□□□□ 0.22
RSF1-211ENST00000532556 SPINK5Q9NQ38 1064 aaPredicted RBP16.43■□□□□ 0.22
RSF1-211ENST00000532556 SLC4A1APQ9BWU0 796 aaKnown RBP16.4■□□□□ 0.22
RSF1-211ENST00000532556 APLP2Q06481 763 aa16.03■□□□□ 0.16
RSF1-211ENST00000532556 ZNF219Q9P2Y4 722 aaPredicted RBP16.02■□□□□ 0.16
RSF1-211ENST00000532556 CSRNP3Q8WYN3 585 aa15.98■□□□□ 0.15
RSF1-211ENST00000532556 RBM42Q9BTD8 480 aaKnown RBP15.97■□□□□ 0.15
RSF1-211ENST00000532556 TRHP20396 242 aaPredicted RBP15.96■□□□□ 0.15
RSF1-211ENST00000532556 ABCB7O75027 752 aa15.94■□□□□ 0.14
RSF1-211ENST00000532556 CHRDL2Q6WN34 429 aa15.91■□□□□ 0.14
RSF1-211ENST00000532556 SP7Q8TDD2 431 aaPredicted RBP15.82■□□□□ 0.12
RSF1-211ENST00000532556 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.79■□□□□ 0.12
RSF1-211ENST00000532556 HNRNPUL2Q1KMD3 747 aaKnown RBP15.79■□□□□ 0.12
RSF1-211ENST00000532556 ZBTB22O15209 634 aa15.74■□□□□ 0.11
RSF1-211ENST00000532556 SLC4A2P04920 1241 aa15.72■□□□□ 0.11
RSF1-211ENST00000532556 SAMD1Q6SPF0 538 aaPredicted RBP15.61■□□□□ 0.09
RSF1-211ENST00000532556 FOXD4L1Q9NU39 408 aa15.61■□□□□ 0.09
RSF1-211ENST00000532556 AKT1S1Q96B36 256 aa15.39■□□□□ 0.05
RSF1-211ENST00000532556 POLA2Q14181 598 aa15.38■□□□□ 0.05
RSF1-211ENST00000532556 PIP4P2Q8N4L2 257 aa15.31■□□□□ 0.04
RSF1-211ENST00000532556 HAX1O00165 279 aa15.27■□□□□ 0.04
RSF1-211ENST00000532556 REM2Q8IYK8 340 aaPredicted RBP15.19■□□□□ 0.02
RSF1-211ENST00000532556 MYCNP04198 464 aaPredicted RBP15.17■□□□□ 0.02
RSF1-211ENST00000532556 FXR2P51116 673 aaKnown RBP eCLIP15.13■□□□□ 0.012e-7■■■■■ 30
RSF1-211ENST00000532556 ZBTB12Q9Y330 459 aaPredicted RBP15.11■□□□□ 0.01
RSF1-211ENST00000532556 PITPNM1O00562 1244 aa15.02■□□□□ -0
RSF1-211ENST00000532556 EVX2Q03828 476 aa14.97□□□□□ -0.01
RSF1-211ENST00000532556 ATXN8OSP0DMR3 200 aa14.95□□□□□ -0.02
RSF1-211ENST00000532556 OSCARQ8IYS5 282 aa14.88□□□□□ -0.03
RSF1-211ENST00000532556 LHX8Q68G74 356 aa14.81□□□□□ -0.04
RSF1-211ENST00000532556 ATF5Q9Y2D1 282 aaPredicted RBP14.76□□□□□ -0.05
RSF1-211ENST00000532556 C19orf67A6NJJ6 358 aa14.67□□□□□ -0.06
RSF1-211ENST00000532556 GABBR2O75899 941 aa14.64□□□□□ -0.07
RSF1-211ENST00000532556 PRKAR2AP13861 404 aaKnown RBP14.62□□□□□ -0.07
RSF1-211ENST00000532556 SPDYE2BA6NHP3 402 aa14.53□□□□□ -0.08
RSF1-211ENST00000532556 SPDYE6P0CI01 402 aa14.53□□□□□ -0.08
RSF1-211ENST00000532556 SPDYE2Q495Y8 402 aa14.53□□□□□ -0.08
RSF1-211ENST00000532556 PLSCR2Q9NRY7 297 aa14.53□□□□□ -0.08
RSF1-211ENST00000532556 FKBP8Q14318 412 aa14.51□□□□□ -0.09
RSF1-211ENST00000532556 SPDYE1Q8NFV5 336 aaPredicted RBP14.48□□□□□ -0.09
RSF1-211ENST00000532556 CLEC11AQ9Y240 323 aa14.4□□□□□ -0.1
RSF1-211ENST00000532556 POTEIP0CG38 1075 aa14.3□□□□□ -0.12
RSF1-211ENST00000532556 CLCN6P51797 869 aa14.3□□□□□ -0.12
RSF1-211ENST00000532556 FBLN2P98095 1184 aa14.28□□□□□ -0.12
RSF1-211ENST00000532556 SSUH2Q9Y2M2 353 aa14.21□□□□□ -0.13
RSF1-211ENST00000532556 CHADLQ6NUI6 762 aa14.19□□□□□ -0.14
RSF1-211ENST00000532556 ZNF692Q9BU19 519 aaPredicted RBP14.15□□□□□ -0.14
RSF1-211ENST00000532556 MKRN4PQ13434 485 aaPredicted RBP14.11□□□□□ -0.15
RSF1-211ENST00000532556 PRR29P0C7W0 189 aa14.1□□□□□ -0.15
RSF1-211ENST00000532556 CD44P16070 742 aaKnown RBP14.1□□□□□ -0.15
RSF1-211ENST00000532556 DCBLD2Q96PD2 775 aa14.06□□□□□ -0.16
RSF1-211ENST00000532556 SPDYE4A6NLX3 237 aa14.05□□□□□ -0.16
RSF1-211ENST00000532556 FARP1Q9Y4F1 1045 aaPredicted RBP13.99□□□□□ -0.17
RSF1-211ENST00000532556 POTEMA6NI47 508 aa13.97□□□□□ -0.17
RSF1-211ENST00000532556 OTUD5Q96G74 571 aa13.96□□□□□ -0.17
RSF1-211ENST00000532556 PCDH10Q9P2E7 1040 aa13.96□□□□□ -0.17
RSF1-211ENST00000532556 RTN4Q9NQC3 1192 aaKnown RBP13.94□□□□□ -0.18
RSF1-211ENST00000532556 AMER1Q5JTC6 1135 aaPredicted RBP13.91□□□□□ -0.18
RSF1-211ENST00000532556 POTEGQ6S5H5 508 aa13.9□□□□□ -0.18
RSF1-211ENST00000532556 ZNF579Q8NAF0 562 aaKnown RBP13.9□□□□□ -0.18
RSF1-211ENST00000532556 PABPN1Q86U42 306 aaKnown RBP eCLIP13.89□□□□□ -0.19
RSF1-211ENST00000532556 FBXO3Q9UK99 471 aa13.81□□□□□ -0.2
RSF1-211ENST00000532556 POTEB2H3BUK9 544 aa13.79□□□□□ -0.2
RSF1-211ENST00000532556 ZRANB1Q9UGI0 708 aa13.75□□□□□ -0.21
RSF1-211ENST00000532556 PROM2Q8N271 834 aa13.74□□□□□ -0.21
RSF1-211ENST00000532556 GALR2O43603 387 aaPredicted RBP13.71□□□□□ -0.21
RSF1-211ENST00000532556 VASPP50552 380 aaPredicted RBP13.63□□□□□ -0.23
RSF1-211ENST00000532556 MAMSTRQ6ZN01 415 aa13.55□□□□□ -0.24
RSF1-211ENST00000532556 PELP1Q8IZL8 1130 aaKnown RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms