RNA–Protein interactions for RNA: ENST00000532451.1

SORL1-210, Transcript of sortilin related receptor 1, humanhuman

TSL 1 (best)

Gene SORL1, Length 2,165 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-210ENST00000532451 NISCHQ9Y2I1 1504 aa50.35■■■■■ 5.65
SORL1-210ENST00000532451 CCDC180Q9P1Z9 1646 aa43.19■■■■■ 4.5
SORL1-210ENST00000532451 ZCCHC6Q5VYS8 1495 aaKnown RBP42.53■■■■■ 4.4
SORL1-210ENST00000532451 SHROOM4Q9ULL8 1493 aa42.22■■■■■ 4.35
SORL1-210ENST00000532451 DCAF1Q9Y4B6 1507 aa41.49■■■■■ 4.23
SORL1-210ENST00000532451 DCAF8L2P0C7V8 631 aa41.47■■■■■ 4.23
SORL1-210ENST00000532451 SUPT5HO00267 1087 aaKnown RBP41.2■■■■■ 4.19
SORL1-210ENST00000532451 MYO15BQ96JP2 1530 aa40.51■■■■■ 4.08
SORL1-210ENST00000532451 SCRIBQ14160 1630 aa40.14■■■■■ 4.02
SORL1-210ENST00000532451 ABCC9O60706 1549 aa40.05■■■■■ 4
SORL1-210ENST00000532451 NACADO15069 1562 aa39.99■■■■□ 3.99
SORL1-210ENST00000532451 CHIC1Q5VXU3 224 aa39.99■■■■□ 3.99
SORL1-210ENST00000532451 RSF1Q96T23 1441 aaPredicted RBP39.59■■■■□ 3.93
SORL1-210ENST00000532451 RB1CC1Q8TDY2 1594 aa39.39■■■■□ 3.9
SORL1-210ENST00000532451 CECR2Q9BXF3 1484 aa39.16■■■■□ 3.86
SORL1-210ENST00000532451 MROH2BQ7Z745 1585 aa39.03■■■■□ 3.84
SORL1-210ENST00000532451 WIZO95785 1651 aa38.79■■■■□ 3.8
SORL1-210ENST00000532451 BAZ1AQ9NRL2 1556 aaPredicted RBP38.75■■■■□ 3.79
SORL1-210ENST00000532451 UNC13AQ9UPW8 1703 aa38.71■■■■□ 3.79
SORL1-210ENST00000532451 LOC105371045A0A1W2PR82 267 aa38.62■■■■□ 3.77
SORL1-210ENST00000532451 TRIM41Q8WV44 630 aa38.54■■■■□ 3.76
SORL1-210ENST00000532451 SMARCA4P51532 1647 aa38.45■■■■□ 3.75
SORL1-210ENST00000532451 TOP2AP11388 1531 aaKnown RBP38.31■■■■□ 3.72
SORL1-210ENST00000532451 BICRAQ9NZM4 1560 aa38.27■■■■□ 3.72
SORL1-210ENST00000532451 EIF4G1Q04637 1599 aaKnown RBP38.2■■■■□ 3.71
SORL1-210ENST00000532451 PCGF6Q9BYE7 350 aa38.13■■■■□ 3.69
SORL1-210ENST00000532451 PABPN1Q86U42 306 aaKnown RBP eCLIP38.11■■■■□ 3.69
SORL1-210ENST00000532451 SMARCA2P51531 1590 aa38.03■■■■□ 3.68
SORL1-210ENST00000532451 CCDC88BA6NC98 1476 aa38.03■■■■□ 3.68
SORL1-210ENST00000532451 FAM9AQ8IZU1 332 aaPredicted RBP38.03■■■■□ 3.68
SORL1-210ENST00000532451 HRCP23327 699 aa37.95■■■■□ 3.66
SORL1-210ENST00000532451 PEG3Q9GZU2 1588 aa37.84■■■■□ 3.65
SORL1-210ENST00000532451 TRIM26Q12899 539 aaPredicted RBP37.69■■■■□ 3.62
SORL1-210ENST00000532451 ABCC8Q09428 1581 aa37.69■■■■□ 3.62
SORL1-210ENST00000532451 EHMT2Q96KQ7 1210 aa37.56■■■■□ 3.6
SORL1-210ENST00000532451 ATAD2BQ9ULI0 1458 aa37.54■■■■□ 3.6
SORL1-210ENST00000532451 BAZ1BQ9UIG0 1483 aaKnown RBP37.41■■■■□ 3.58
SORL1-210ENST00000532451 SOGA1O94964 1423 aa37.24■■■■□ 3.55
SORL1-210ENST00000532451 WRNQ14191 1432 aaPredicted RBP eCLIP37.22■■■■□ 3.55
SORL1-210ENST00000532451 EEA1Q15075 1411 aa37.22■■■■□ 3.55
SORL1-210ENST00000532451 RUSC2Q8N2Y8 1516 aa37.05■■■■□ 3.52
SORL1-210ENST00000532451 SYNJ1O43426 1573 aa37.04■■■■□ 3.52
SORL1-210ENST00000532451 CSRNP3Q8WYN3 585 aa37.04■■■■□ 3.52
SORL1-210ENST00000532451 PPARGC1BQ86YN6 1023 aaKnown RBP37.02■■■■□ 3.52
SORL1-210ENST00000532451 HMGXB3Q12766 1538 aa36.97■■■■□ 3.51
SORL1-210ENST00000532451 TNIKQ9UKE5 1360 aa36.97■■■■□ 3.51
SORL1-210ENST00000532451 NCAPD3P42695 1498 aa36.96■■■■□ 3.51
SORL1-210ENST00000532451 CEP162Q5TB80 1403 aa36.92■■■■□ 3.5
SORL1-210ENST00000532451 GOLGA3Q08378 1498 aa36.85■■■■□ 3.49
SORL1-210ENST00000532451 UBTFP17480 764 aaKnown RBP36.74■■■■□ 3.47
SORL1-210ENST00000532451 ZEB1P37275 1124 aaPredicted RBP36.74■■■■□ 3.47
SORL1-210ENST00000532451 TOP2BQ02880 1626 aa36.71■■■■□ 3.47
SORL1-210ENST00000532451 CEP164Q9UPV0 1460 aa36.71■■■■□ 3.47
SORL1-210ENST00000532451 KIF21BO75037 1637 aa36.7■■■■□ 3.47
SORL1-210ENST00000532451 BIVM-ERCC5R4GMW8 1640 aa36.63■■■■□ 3.45
SORL1-210ENST00000532451 CFTRP13569 1480 aa36.5■■■■□ 3.43
SORL1-210ENST00000532451 RAPGEF2Q9Y4G8 1499 aa36.4■■■■□ 3.42
SORL1-210ENST00000532451 CUX1P39880 1505 aa36.4■■■■□ 3.42
SORL1-210ENST00000532451 CLIP1P30622 1438 aa36.34■■■■□ 3.41
SORL1-210ENST00000532451 PRDM2Q13029 1718 aa36.28■■■■□ 3.4
SORL1-210ENST00000532451 TTBK1Q5TCY1 1321 aaPredicted RBP36.27■■■■□ 3.4
SORL1-210ENST00000532451 ERICH3Q5RHP9 1530 aa36.22■■■■□ 3.39
SORL1-210ENST00000532451 PRXQ9BXM0 1461 aa36.21■■■■□ 3.39
SORL1-210ENST00000532451 CC2D2AQ9P2K1 1620 aa36.18■■■■□ 3.38
SORL1-210ENST00000532451 VPS8Q8N3P4 1428 aa36.17■■■■□ 3.38
SORL1-210ENST00000532451 CADPSQ9ULU8 1353 aa36.15■■■■□ 3.38
SORL1-210ENST00000532451 KIF27Q86VH2 1401 aa36.14■■■■□ 3.38
SORL1-210ENST00000532451 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP36.12■■■■□ 3.37
SORL1-210ENST00000532451 CCER1Q8TC90 406 aaPredicted RBP36.06■■■■□ 3.36
SORL1-210ENST00000532451 RANGAP1P46060 587 aaPredicted RBP35.93■■■■□ 3.34
SORL1-210ENST00000532451 APLP2Q06481 763 aa35.88■■■■□ 3.33
SORL1-210ENST00000532451 ARAP1Q96P48 1450 aa35.85■■■■□ 3.33
SORL1-210ENST00000532451 CUX2O14529 1486 aa35.83■■■■□ 3.33
SORL1-210ENST00000532451 FGD5Q6ZNL6 1462 aa35.81■■■■□ 3.32
SORL1-210ENST00000532451 FANCD2Q9BXW9 1451 aa35.78■■■■□ 3.32
SORL1-210ENST00000532451 IGF1RP08069 1367 aa35.74■■■■□ 3.31
SORL1-210ENST00000532451 DNMBPQ6XZF7 1577 aa35.62■■■■□ 3.29
SORL1-210ENST00000532451 ARHGAP35Q9NRY4 1499 aa35.61■■■■□ 3.29
SORL1-210ENST00000532451 HNRNPUL2Q1KMD3 747 aaKnown RBP35.58■■■■□ 3.29
SORL1-210ENST00000532451 CARMIL1Q5VZK9 1371 aa35.58■■■■□ 3.29
SORL1-210ENST00000532451 NESP48681 1621 aa35.56■■■■□ 3.28
SORL1-210ENST00000532451 TOPBP1Q92547 1522 aa35.52■■■■□ 3.28
SORL1-210ENST00000532451 LAMC3Q9Y6N6 1575 aa35.47■■■■□ 3.27
SORL1-210ENST00000532451 ABCA10Q8WWZ4 1543 aa35.46■■■■□ 3.27
SORL1-210ENST00000532451 POLA1P09884 1462 aaPredicted RBP35.46■■■■□ 3.27
SORL1-210ENST00000532451 KANK4Q5T7N3 995 aaPredicted RBP35.44■■■■□ 3.26
SORL1-210ENST00000532451 RAD54L2Q9Y4B4 1467 aa35.43■■■■□ 3.26
SORL1-210ENST00000532451 URB2Q14146 1524 aaKnown RBP35.29■■■■□ 3.24
SORL1-210ENST00000532451 RRBP1Q9P2E9 1410 aaKnown RBP35.28■■■■□ 3.24
SORL1-210ENST00000532451 CUL7Q14999 1698 aa35.24■■■■□ 3.23
SORL1-210ENST00000532451 MAP3K1Q13233 1512 aa35.22■■■■□ 3.23
SORL1-210ENST00000532451 PDS5BQ9NTI5 1447 aa35.2■■■■□ 3.23
SORL1-210ENST00000532451 WDR97A6NE52 1622 aa35.2■■■■□ 3.23
SORL1-210ENST00000532451 TIAM1Q13009 1591 aa35.18■■■■□ 3.22
SORL1-210ENST00000532451 FHAD1B1AJZ9 1412 aa35.14■■■■□ 3.22
SORL1-210ENST00000532451 DNAJC5BQ9UF47 199 aa35.13■■■■□ 3.21
SORL1-210ENST00000532451 CCNB3Q8WWL7 1395 aa35.11■■■■□ 3.21
SORL1-210ENST00000532451 DIEXFQ68CQ4 756 aaKnown RBP35.1■■■■□ 3.21
SORL1-210ENST00000532451 ABCA5Q8WWZ7 1642 aa35.07■■■■□ 3.2
SORL1-210ENST00000532451 EFCAB5A4FU69 1503 aa35.06■■■■□ 3.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms