RNA–Protein interactions for RNA: ENST00000532443.1

PPFIA1-221, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 4

Gene PPFIA1, Length 587 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-221ENST00000532443 AEBP2Q6ZN18 517 aaPredicted RBP23.04■■□□□ 1.28
PPFIA1-221ENST00000532443 CHIC1Q5VXU3 224 aa22.29■■□□□ 1.16
PPFIA1-221ENST00000532443 PHF23Q9BUL5 403 aaPredicted RBP19.63■□□□□ 0.73
PPFIA1-221ENST00000532443 SENP3Q9H4L4 574 aaPredicted RBP19.52■□□□□ 0.72
PPFIA1-221ENST00000532443 FOXD1Q16676 465 aa18.18■□□□□ 0.5
PPFIA1-221ENST00000532443 PLPPR3Q6T4P5 718 aa18.02■□□□□ 0.48
PPFIA1-221ENST00000532443 ADRA2BP18089 450 aa17.4■□□□□ 0.38
PPFIA1-221ENST00000532443 PPP6R1Q9UPN7 881 aa17.39■□□□□ 0.37
PPFIA1-221ENST00000532443 PIAS4Q8N2W9 510 aaPredicted RBP17.14■□□□□ 0.33
PPFIA1-221ENST00000532443 MSH5O43196 834 aa16.76■□□□□ 0.27
PPFIA1-221ENST00000532443 POTEDQ86YR6 584 aa16.2■□□□□ 0.18
PPFIA1-221ENST00000532443 PPP4R3CPQ6ZMV5 832 aa15.91■□□□□ 0.14
PPFIA1-221ENST00000532443 MAPK8IP2Q13387 824 aaPredicted RBP15.84■□□□□ 0.13
PPFIA1-221ENST00000532443 SCAF1Q9H7N4 1312 aaKnown RBP15.81■□□□□ 0.12
PPFIA1-221ENST00000532443 DMRT2Q9Y5R5 561 aa15.56■□□□□ 0.08
PPFIA1-221ENST00000532443 CNKSR2Q8WXI2 1034 aa15.45■□□□□ 0.06
PPFIA1-221ENST00000532443 KCNA4P22459 653 aa15.4■□□□□ 0.06
PPFIA1-221ENST00000532443 NCBP3Q53F19 620 aaKnown RBP15.4■□□□□ 0.06
PPFIA1-221ENST00000532443 NPM3O75607 178 aaKnown RBP15.22■□□□□ 0.03
PPFIA1-221ENST00000532443 RNF216Q9NWF9 866 aaPredicted RBP15.16■□□□□ 0.02
PPFIA1-221ENST00000532443 HOXD11P31277 338 aaPredicted RBP15.14■□□□□ 0.01
PPFIA1-221ENST00000532443 DCAF8L1A6NGE4 600 aa15.04■□□□□ -0
PPFIA1-221ENST00000532443 SLC4A1APQ9BWU0 796 aaKnown RBP14.62□□□□□ -0.07
PPFIA1-221ENST00000532443 DNAJC5BQ9UF47 199 aa14.6□□□□□ -0.07
PPFIA1-221ENST00000532443 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.53□□□□□ -0.082e-9■■□□□ 12.4
PPFIA1-221ENST00000532443 SLC4A2P04920 1241 aa14.41□□□□□ -0.1
PPFIA1-221ENST00000532443 RNF39Q9H2S5 420 aa14.37□□□□□ -0.11
PPFIA1-221ENST00000532443 CACNB1Q02641 598 aaPredicted RBP14.29□□□□□ -0.12
PPFIA1-221ENST00000532443 U3KPZ7 1027 aaPredicted RBP14.25□□□□□ -0.13
PPFIA1-221ENST00000532443 ZBTB22O15209 634 aa14.17□□□□□ -0.14
PPFIA1-221ENST00000532443 C1QBPQ07021 282 aaKnown RBP14.16□□□□□ -0.14
PPFIA1-221ENST00000532443 FOXD4L1Q9NU39 408 aa14.16□□□□□ -0.14
PPFIA1-221ENST00000532443 EHMT2Q96KQ7 1210 aa14.11□□□□□ -0.15
PPFIA1-221ENST00000532443 MYCNP04198 464 aaPredicted RBP14.04□□□□□ -0.16
PPFIA1-221ENST00000532443 SPINK5Q9NQ38 1064 aaPredicted RBP13.94□□□□□ -0.18
PPFIA1-221ENST00000532443 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.93□□□□□ -0.18
PPFIA1-221ENST00000532443 HNRNPUL2Q1KMD3 747 aaKnown RBP13.93□□□□□ -0.18
PPFIA1-221ENST00000532443 CSRNP3Q8WYN3 585 aa13.92□□□□□ -0.18
PPFIA1-221ENST00000532443 CAPN15O75808 1086 aa13.9□□□□□ -0.18
PPFIA1-221ENST00000532443 SAMD1Q6SPF0 538 aaPredicted RBP13.9□□□□□ -0.18
PPFIA1-221ENST00000532443 APLP2Q06481 763 aa13.83□□□□□ -0.2
PPFIA1-221ENST00000532443 TRHP20396 242 aaPredicted RBP13.81□□□□□ -0.2
PPFIA1-221ENST00000532443 ATF5Q9Y2D1 282 aaPredicted RBP13.75□□□□□ -0.21
PPFIA1-221ENST00000532443 ZNF219Q9P2Y4 722 aaPredicted RBP13.7□□□□□ -0.22
PPFIA1-221ENST00000532443 ABCB7O75027 752 aa13.67□□□□□ -0.22
PPFIA1-221ENST00000532443 DSG3P32926 999 aa13.64□□□□□ -0.23
PPFIA1-221ENST00000532443 ATXN8OSP0DMR3 200 aa13.6□□□□□ -0.23
PPFIA1-221ENST00000532443 POLA2Q14181 598 aa13.51□□□□□ -0.25
PPFIA1-221ENST00000532443 ZBTB12Q9Y330 459 aaPredicted RBP13.19□□□□□ -0.3
PPFIA1-221ENST00000532443 FBLN2P98095 1184 aa13.13□□□□□ -0.31
PPFIA1-221ENST00000532443 MKRN4PQ13434 485 aaPredicted RBP13.11□□□□□ -0.31
PPFIA1-221ENST00000532443 OSCARQ8IYS5 282 aa13.09□□□□□ -0.31
PPFIA1-221ENST00000532443 RBM42Q9BTD8 480 aaKnown RBP12.96□□□□□ -0.33
PPFIA1-221ENST00000532443 SPDYE2BA6NHP3 402 aa12.84□□□□□ -0.35
PPFIA1-221ENST00000532443 SPDYE6P0CI01 402 aa12.84□□□□□ -0.35
PPFIA1-221ENST00000532443 SPDYE2Q495Y8 402 aa12.84□□□□□ -0.35
PPFIA1-221ENST00000532443 ZNF692Q9BU19 519 aaPredicted RBP12.82□□□□□ -0.36
PPFIA1-221ENST00000532443 AKT1S1Q96B36 256 aa12.78□□□□□ -0.36
PPFIA1-221ENST00000532443 SPDYE4A6NLX3 237 aa12.74□□□□□ -0.37
PPFIA1-221ENST00000532443 POTEHQ6S545 545 aa12.72□□□□□ -0.37
PPFIA1-221ENST00000532443 SSUH2Q9Y2M2 353 aa12.72□□□□□ -0.37
PPFIA1-221ENST00000532443 REM2Q8IYK8 340 aaPredicted RBP12.7□□□□□ -0.38
PPFIA1-221ENST00000532443 PABPN1Q86U42 306 aaKnown RBP eCLIP12.66□□□□□ -0.38
PPFIA1-221ENST00000532443 FKBP8Q14318 412 aa12.64□□□□□ -0.39
PPFIA1-221ENST00000532443 PITPNM1O00562 1244 aa12.58□□□□□ -0.4
PPFIA1-221ENST00000532443 CLEC11AQ9Y240 323 aa12.57□□□□□ -0.4
PPFIA1-221ENST00000532443 CHRDL2Q6WN34 429 aa12.54□□□□□ -0.4
PPFIA1-221ENST00000532443 SPDYE1Q8NFV5 336 aaPredicted RBP12.52□□□□□ -0.41
PPFIA1-221ENST00000532443 PROM2Q8N271 834 aa12.41□□□□□ -0.42
PPFIA1-221ENST00000532443 PRR29P0C7W0 189 aa12.37□□□□□ -0.43
PPFIA1-221ENST00000532443 PIP4P2Q8N4L2 257 aa12.36□□□□□ -0.43
PPFIA1-221ENST00000532443 STAG3Q9UJ98 1225 aa12.33□□□□□ -0.44
PPFIA1-221ENST00000532443 FXR2P51116 673 aaKnown RBP eCLIP12.31□□□□□ -0.44
PPFIA1-221ENST00000532443 CHADLQ6NUI6 762 aa12.28□□□□□ -0.44
PPFIA1-221ENST00000532443 PRKAR2AP13861 404 aaKnown RBP12.27□□□□□ -0.45
PPFIA1-221ENST00000532443 CREBZFQ9NS37 354 aa12.17□□□□□ -0.46
PPFIA1-221ENST00000532443 FBXO3Q9UK99 471 aa12.14□□□□□ -0.47
PPFIA1-221ENST00000532443 MIER1Q8N108 512 aa12.12□□□□□ -0.47
PPFIA1-221ENST00000532443 PLCD3Q8N3E9 789 aa12.1□□□□□ -0.47
PPFIA1-221ENST00000532443 FARP1Q9Y4F1 1045 aaPredicted RBP12.07□□□□□ -0.48
PPFIA1-221ENST00000532443 VASPP50552 380 aaPredicted RBP12.04□□□□□ -0.48
PPFIA1-221ENST00000532443 HAX1O00165 279 aa12.03□□□□□ -0.48
PPFIA1-221ENST00000532443 PLEKHG5O94827 1062 aa12.02□□□□□ -0.49
PPFIA1-221ENST00000532443 NISCHQ9Y2I1 1504 aa12.01□□□□□ -0.49
PPFIA1-221ENST00000532443 MNX1P50219 401 aaPredicted RBP11.99□□□□□ -0.49
PPFIA1-221ENST00000532443 NPM1P06748 294 aaKnown RBP eCLIP11.93□□□□□ -0.5
PPFIA1-221ENST00000532443 EVX2Q03828 476 aa11.93□□□□□ -0.5
PPFIA1-221ENST00000532443 KLHL34Q8N239 644 aa11.92□□□□□ -0.5
PPFIA1-221ENST00000532443 SP7Q8TDD2 431 aaPredicted RBP11.92□□□□□ -0.5
PPFIA1-221ENST00000532443 C19orf67A6NJJ6 358 aa11.91□□□□□ -0.5
PPFIA1-221ENST00000532443 CD44P16070 742 aaKnown RBP11.91□□□□□ -0.5
PPFIA1-221ENST00000532443 ZBTB47Q9UFB7 747 aaPredicted RBP11.87□□□□□ -0.51
PPFIA1-221ENST00000532443 IFNLR1Q8IU57 520 aaPredicted RBP11.86□□□□□ -0.51
PPFIA1-221ENST00000532443 TSPYL2Q9H2G4 693 aaPredicted RBP11.83□□□□□ -0.52
PPFIA1-221ENST00000532443 ZRANB1Q9UGI0 708 aa11.83□□□□□ -0.52
PPFIA1-221ENST00000532443 RASEFQ8IZ41 740 aa11.82□□□□□ -0.52
PPFIA1-221ENST00000532443 PAK3O75914 559 aaPredicted RBP11.8□□□□□ -0.52
PPFIA1-221ENST00000532443 NUBP1P53384 320 aa11.78□□□□□ -0.52
PPFIA1-221ENST00000532443 SPOCK2Q92563 424 aa11.74□□□□□ -0.53
PPFIA1-221ENST00000532443 PHF12Q96QT6 1004 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms