RNA–Protein interactions for RNA: ENST00000532377.1

LMO7-221, Transcript of LIM domain 7, humanhuman

TSL 3

Gene LMO7, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO7-221ENST00000532377 AEBP2Q6ZN18 517 aaPredicted RBP14.82□□□□□ -0.04
LMO7-221ENST00000532377 CHIC1Q5VXU3 224 aa14.42□□□□□ -0.1
LMO7-221ENST00000532377 PHF23Q9BUL5 403 aaPredicted RBP12.73□□□□□ -0.37
LMO7-221ENST00000532377 SENP3Q9H4L4 574 aaPredicted RBP12.47□□□□□ -0.41
LMO7-221ENST00000532377 PLPPR3Q6T4P5 718 aa11.65□□□□□ -0.54
LMO7-221ENST00000532377 FOXD1Q16676 465 aa11.64□□□□□ -0.55
LMO7-221ENST00000532377 PPP6R1Q9UPN7 881 aa11.23□□□□□ -0.61
LMO7-221ENST00000532377 ADRA2BP18089 450 aa11.17□□□□□ -0.62
LMO7-221ENST00000532377 POTEDQ86YR6 584 aa10.95□□□□□ -0.66
LMO7-221ENST00000532377 PIAS4Q8N2W9 510 aaPredicted RBP10.89□□□□□ -0.67
LMO7-221ENST00000532377 MSH5O43196 834 aa10.66□□□□□ -0.7
LMO7-221ENST00000532377 PPP4R3CPQ6ZMV5 832 aa10.29□□□□□ -0.76
LMO7-221ENST00000532377 MAPK8IP2Q13387 824 aaPredicted RBP10.15□□□□□ -0.78
LMO7-221ENST00000532377 SCAF1Q9H7N4 1312 aaKnown RBP10.11□□□□□ -0.79
LMO7-221ENST00000532377 KCNA4P22459 653 aa10.07□□□□□ -0.8
LMO7-221ENST00000532377 DMRT2Q9Y5R5 561 aa10□□□□□ -0.81
LMO7-221ENST00000532377 CNKSR2Q8WXI2 1034 aa9.99□□□□□ -0.81
LMO7-221ENST00000532377 NCBP3Q53F19 620 aaKnown RBP9.94□□□□□ -0.82
LMO7-221ENST00000532377 NPM3O75607 178 aaKnown RBP9.9□□□□□ -0.82
LMO7-221ENST00000532377 HOXD11P31277 338 aaPredicted RBP9.81□□□□□ -0.84
LMO7-221ENST00000532377 RNF216Q9NWF9 866 aaPredicted RBP9.81□□□□□ -0.84
LMO7-221ENST00000532377 DNAJC5BQ9UF47 199 aa9.7□□□□□ -0.86
LMO7-221ENST00000532377 SLC4A1APQ9BWU0 796 aaKnown RBP9.53□□□□□ -0.88
LMO7-221ENST00000532377 DCAF8L1A6NGE4 600 aa9.42□□□□□ -0.9
LMO7-221ENST00000532377 SLC4A2P04920 1241 aa9.39□□□□□ -0.91
LMO7-221ENST00000532377 ZBTB22O15209 634 aa9.33□□□□□ -0.92
LMO7-221ENST00000532377 CSRNP3Q8WYN3 585 aa9.23□□□□□ -0.93
LMO7-221ENST00000532377 EHMT2Q96KQ7 1210 aa9.23□□□□□ -0.93
LMO7-221ENST00000532377 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.23□□□□□ -0.934e-9■■□□□ 12.3
LMO7-221ENST00000532377 FOXD4L1Q9NU39 408 aa9.23□□□□□ -0.93
LMO7-221ENST00000532377 RNF39Q9H2S5 420 aa9.2□□□□□ -0.94
LMO7-221ENST00000532377 U3KPZ7 1027 aaPredicted RBP9.18□□□□□ -0.94
LMO7-221ENST00000532377 CACNB1Q02641 598 aaPredicted RBP9.13□□□□□ -0.95
LMO7-221ENST00000532377 MYCNP04198 464 aaPredicted RBP9.09□□□□□ -0.95
LMO7-221ENST00000532377 C1QBPQ07021 282 aaKnown RBP9.04□□□□□ -0.96
LMO7-221ENST00000532377 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.96□□□□□ -0.98
LMO7-221ENST00000532377 HNRNPUL2Q1KMD3 747 aaKnown RBP8.96□□□□□ -0.98
LMO7-221ENST00000532377 SAMD1Q6SPF0 538 aaPredicted RBP8.96□□□□□ -0.98
LMO7-221ENST00000532377 ATF5Q9Y2D1 282 aaPredicted RBP8.94□□□□□ -0.98
LMO7-221ENST00000532377 ATXN8OSP0DMR3 200 aa8.93□□□□□ -0.98
LMO7-221ENST00000532377 SPINK5Q9NQ38 1064 aaPredicted RBP8.91□□□□□ -0.98
LMO7-221ENST00000532377 APLP2Q06481 763 aa8.83□□□□□ -1
LMO7-221ENST00000532377 CAPN15O75808 1086 aa8.79□□□□□ -1
LMO7-221ENST00000532377 ZNF219Q9P2Y4 722 aaPredicted RBP8.77□□□□□ -1.01
LMO7-221ENST00000532377 TRHP20396 242 aaPredicted RBP8.75□□□□□ -1.01
LMO7-221ENST00000532377 DSG3P32926 999 aa8.74□□□□□ -1.01
LMO7-221ENST00000532377 ABCB7O75027 752 aa8.66□□□□□ -1.02
LMO7-221ENST00000532377 POLA2Q14181 598 aa8.65□□□□□ -1.02
LMO7-221ENST00000532377 MKRN4PQ13434 485 aaPredicted RBP8.56□□□□□ -1.04
LMO7-221ENST00000532377 POTEHQ6S545 545 aa8.47□□□□□ -1.05
LMO7-221ENST00000532377 ZBTB12Q9Y330 459 aaPredicted RBP8.47□□□□□ -1.05
LMO7-221ENST00000532377 FBLN2P98095 1184 aa8.42□□□□□ -1.06
LMO7-221ENST00000532377 OSCARQ8IYS5 282 aa8.37□□□□□ -1.07
LMO7-221ENST00000532377 SPDYE2BA6NHP3 402 aa8.28□□□□□ -1.08
LMO7-221ENST00000532377 SPDYE6P0CI01 402 aa8.28□□□□□ -1.08
LMO7-221ENST00000532377 SPDYE2Q495Y8 402 aa8.28□□□□□ -1.08
LMO7-221ENST00000532377 SSUH2Q9Y2M2 353 aa8.28□□□□□ -1.08
LMO7-221ENST00000532377 SPDYE4A6NLX3 237 aa8.26□□□□□ -1.09
LMO7-221ENST00000532377 FKBP8Q14318 412 aa8.26□□□□□ -1.09
LMO7-221ENST00000532377 PROM2Q8N271 834 aa8.25□□□□□ -1.09
LMO7-221ENST00000532377 RBM42Q9BTD8 480 aaKnown RBP8.24□□□□□ -1.09
LMO7-221ENST00000532377 ZNF692Q9BU19 519 aaPredicted RBP8.22□□□□□ -1.09
LMO7-221ENST00000532377 AKT1S1Q96B36 256 aa8.18□□□□□ -1.1
LMO7-221ENST00000532377 PABPN1Q86U42 306 aaKnown RBP eCLIP8.12□□□□□ -1.11
LMO7-221ENST00000532377 REM2Q8IYK8 340 aaPredicted RBP8.12□□□□□ -1.11
LMO7-221ENST00000532377 PITPNM1O00562 1244 aa8.04□□□□□ -1.12
LMO7-221ENST00000532377 SPDYE1Q8NFV5 336 aaPredicted RBP8.01□□□□□ -1.13
LMO7-221ENST00000532377 STAG3Q9UJ98 1225 aa7.96□□□□□ -1.14
LMO7-221ENST00000532377 CHRDL2Q6WN34 429 aa7.94□□□□□ -1.14
LMO7-221ENST00000532377 FBXO3Q9UK99 471 aa7.94□□□□□ -1.14
LMO7-221ENST00000532377 CLEC11AQ9Y240 323 aa7.93□□□□□ -1.14
LMO7-221ENST00000532377 FXR2P51116 673 aaKnown RBP eCLIP7.92□□□□□ -1.143e-18■□□□□ 11.1
LMO7-221ENST00000532377 PRR29P0C7W0 189 aa7.88□□□□□ -1.15
LMO7-221ENST00000532377 VASPP50552 380 aaPredicted RBP7.88□□□□□ -1.15
LMO7-221ENST00000532377 CREBZFQ9NS37 354 aa7.88□□□□□ -1.15
LMO7-221ENST00000532377 PIP4P2Q8N4L2 257 aa7.87□□□□□ -1.15
LMO7-221ENST00000532377 MNX1P50219 401 aaPredicted RBP7.85□□□□□ -1.15
LMO7-221ENST00000532377 IFNLR1Q8IU57 520 aaPredicted RBP7.82□□□□□ -1.16
LMO7-221ENST00000532377 CHADLQ6NUI6 762 aa7.81□□□□□ -1.16
LMO7-221ENST00000532377 PRKAR2AP13861 404 aaKnown RBP7.79□□□□□ -1.16
LMO7-221ENST00000532377 MIER1Q8N108 512 aa7.79□□□□□ -1.16
LMO7-221ENST00000532377 PLCD3Q8N3E9 789 aa7.76□□□□□ -1.17
LMO7-221ENST00000532377 FARP1Q9Y4F1 1045 aaPredicted RBP7.74□□□□□ -1.17
LMO7-221ENST00000532377 NUBP1P53384 320 aa7.7□□□□□ -1.18
LMO7-221ENST00000532377 PLEKHG5O94827 1062 aa7.68□□□□□ -1.18
LMO7-221ENST00000532377 ZBTB47Q9UFB7 747 aaPredicted RBP7.68□□□□□ -1.18
LMO7-221ENST00000532377 SPOCK2Q92563 424 aa7.66□□□□□ -1.18
LMO7-221ENST00000532377 KLHL34Q8N239 644 aa7.65□□□□□ -1.18
LMO7-221ENST00000532377 C19orf67A6NJJ6 358 aa7.64□□□□□ -1.19
LMO7-221ENST00000532377 NPM1P06748 294 aaKnown RBP eCLIP7.64□□□□□ -1.19
LMO7-221ENST00000532377 RASEFQ8IZ41 740 aa7.64□□□□□ -1.19
LMO7-221ENST00000532377 SP7Q8TDD2 431 aaPredicted RBP7.64□□□□□ -1.19
LMO7-221ENST00000532377 EVX2Q03828 476 aa7.6□□□□□ -1.19
LMO7-221ENST00000532377 PKD2Q13563 968 aa7.57□□□□□ -1.2
LMO7-221ENST00000532377 CD44P16070 742 aaKnown RBP7.56□□□□□ -1.2
LMO7-221ENST00000532377 CCDC61Q9Y6R9 512 aa7.56□□□□□ -1.2
LMO7-221ENST00000532377 RTN4Q9NQC3 1192 aaKnown RBP7.54□□□□□ -1.2
LMO7-221ENST00000532377 HAX1O00165 279 aa7.53□□□□□ -1.2
LMO7-221ENST00000532377 FAM212AQ96EL1 285 aa7.53□□□□□ -1.2
LMO7-221ENST00000532377 TSPYL2Q9H2G4 693 aaPredicted RBP7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms