RNA–Protein interactions for RNA: ENST00000532068.1

AC044839.3-201, humanhuman

TSL 3 BASIC

Gene AC044839.3, Length 860 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC044839.3-201ENST00000532068 CHIC1Q5VXU3 224 aa22.75■■□□□ 1.23
AC044839.3-201ENST00000532068 AEBP2Q6ZN18 517 aaPredicted RBP22.3■■□□□ 1.16
AC044839.3-201ENST00000532068 PHF23Q9BUL5 403 aaPredicted RBP20■□□□□ 0.79
AC044839.3-201ENST00000532068 SENP3Q9H4L4 574 aaPredicted RBP18.97■□□□□ 0.63
AC044839.3-201ENST00000532068 PLPPR3Q6T4P5 718 aa18.95■□□□□ 0.62
AC044839.3-201ENST00000532068 ADRA2BP18089 450 aa17.57■□□□□ 0.4
AC044839.3-201ENST00000532068 NISCHQ9Y2I1 1504 aa17.53■□□□□ 0.4
AC044839.3-201ENST00000532068 FOXD1Q16676 465 aa17.39■□□□□ 0.37
AC044839.3-201ENST00000532068 PPP6R1Q9UPN7 881 aa17.38■□□□□ 0.37
AC044839.3-201ENST00000532068 KCNA4P22459 653 aa17.32■□□□□ 0.36
AC044839.3-201ENST00000532068 EHMT2Q96KQ7 1210 aa17.28■□□□□ 0.36
AC044839.3-201ENST00000532068 PPP4R3CPQ6ZMV5 832 aa16.76■□□□□ 0.27
AC044839.3-201ENST00000532068 SLC4A1APQ9BWU0 796 aaKnown RBP16.75■□□□□ 0.27
AC044839.3-201ENST00000532068 NCBP3Q53F19 620 aaKnown RBP16.72■□□□□ 0.27
AC044839.3-201ENST00000532068 PIAS4Q8N2W9 510 aaPredicted RBP16.71■□□□□ 0.27
AC044839.3-201ENST00000532068 CSRNP3Q8WYN3 585 aa16.57■□□□□ 0.24
AC044839.3-201ENST00000532068 NPM3O75607 178 aaKnown RBP16.29■□□□□ 0.2
AC044839.3-201ENST00000532068 SCAF1Q9H7N4 1312 aaKnown RBP16.18■□□□□ 0.18
AC044839.3-201ENST00000532068 CNKSR2Q8WXI2 1034 aa16.14■□□□□ 0.17
AC044839.3-201ENST00000532068 ABCC9O60706 1549 aa16■□□□□ 0.15
AC044839.3-201ENST00000532068 ZBTB22O15209 634 aa15.86■□□□□ 0.13
AC044839.3-201ENST00000532068 CCDC180Q9P1Z9 1646 aa15.84■□□□□ 0.13
AC044839.3-201ENST00000532068 MSH5O43196 834 aa15.82■□□□□ 0.12
AC044839.3-201ENST00000532068 FOXD4L1Q9NU39 408 aa15.76■□□□□ 0.11
AC044839.3-201ENST00000532068 DNAJC5BQ9UF47 199 aa15.66■□□□□ 0.1
AC044839.3-201ENST00000532068 RNF216Q9NWF9 866 aaPredicted RBP15.58■□□□□ 0.08
AC044839.3-201ENST00000532068 MAPK8IP2Q13387 824 aaPredicted RBP15.57■□□□□ 0.08
AC044839.3-201ENST00000532068 AMER1Q5JTC6 1135 aaPredicted RBP15.29■□□□□ 0.04
AC044839.3-201ENST00000532068 HOXD11P31277 338 aaPredicted RBP15.23■□□□□ 0.03
AC044839.3-201ENST00000532068 SLC24A1O60721 1099 aa15.22■□□□□ 0.03
AC044839.3-201ENST00000532068 DMRT2Q9Y5R5 561 aa15.22■□□□□ 0.03
AC044839.3-201ENST00000532068 ATXN8OSP0DMR3 200 aa15.16■□□□□ 0.02
AC044839.3-201ENST00000532068 RTN4Q9NQC3 1192 aaKnown RBP15.15■□□□□ 0.02
AC044839.3-201ENST00000532068 RB1CC1Q8TDY2 1594 aa15.12■□□□□ 0.01
AC044839.3-201ENST00000532068 MYCNP04198 464 aaPredicted RBP15.12■□□□□ 0.01
AC044839.3-201ENST00000532068 SLC4A2P04920 1241 aa15.12■□□□□ 0.01
AC044839.3-201ENST00000532068 FKBP8Q14318 412 aa15.02■□□□□ -0
AC044839.3-201ENST00000532068 NACADO15069 1562 aa14.98□□□□□ -0.01
AC044839.3-201ENST00000532068 PABPN1Q86U42 306 aaKnown RBP eCLIP14.89□□□□□ -0.03
AC044839.3-201ENST00000532068 DCAF8L2P0C7V8 631 aa14.78□□□□□ -0.04
AC044839.3-201ENST00000532068 UNC13AQ9UPW8 1703 aa14.77□□□□□ -0.05
AC044839.3-201ENST00000532068 MYO15BQ96JP2 1530 aa14.75□□□□□ -0.05
AC044839.3-201ENST00000532068 BICRAQ9NZM4 1560 aa14.71□□□□□ -0.05
AC044839.3-201ENST00000532068 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.69□□□□□ -0.06
AC044839.3-201ENST00000532068 HNRNPUL2Q1KMD3 747 aaKnown RBP14.69□□□□□ -0.06
AC044839.3-201ENST00000532068 DCAF8L1A6NGE4 600 aa14.67□□□□□ -0.06
AC044839.3-201ENST00000532068 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.66□□□□□ -0.06
AC044839.3-201ENST00000532068 SAMD1Q6SPF0 538 aaPredicted RBP14.63□□□□□ -0.07
AC044839.3-201ENST00000532068 SHROOM4Q9ULL8 1493 aa14.55□□□□□ -0.08
AC044839.3-201ENST00000532068 ZCCHC6Q5VYS8 1495 aaKnown RBP14.54□□□□□ -0.08
AC044839.3-201ENST00000532068 DCAF1Q9Y4B6 1507 aa14.54□□□□□ -0.08
AC044839.3-201ENST00000532068 ATF5Q9Y2D1 282 aaPredicted RBP14.5□□□□□ -0.09
AC044839.3-201ENST00000532068 CECR2Q9BXF3 1484 aa14.48□□□□□ -0.09
AC044839.3-201ENST00000532068 CC2D2AQ9P2K1 1620 aa14.43□□□□□ -0.1
AC044839.3-201ENST00000532068 APLP2Q06481 763 aa14.38□□□□□ -0.11
AC044839.3-201ENST00000532068 U3KPZ7 1027 aaPredicted RBP14.38□□□□□ -0.11
AC044839.3-201ENST00000532068 EIF4G1Q04637 1599 aaKnown RBP14.35□□□□□ -0.11
AC044839.3-201ENST00000532068 FBXO3Q9UK99 471 aa14.35□□□□□ -0.11
AC044839.3-201ENST00000532068 DNAJC5Q9H3Z4 198 aa14.33□□□□□ -0.12
AC044839.3-201ENST00000532068 SCRIBQ14160 1630 aa14.33□□□□□ -0.12
AC044839.3-201ENST00000532068 ZNF219Q9P2Y4 722 aaPredicted RBP14.3□□□□□ -0.12
AC044839.3-201ENST00000532068 SPDYE4A6NLX3 237 aa14.18□□□□□ -0.14
AC044839.3-201ENST00000532068 FBLN2P98095 1184 aa14.07□□□□□ -0.16
AC044839.3-201ENST00000532068 VASPP50552 380 aaPredicted RBP14.02□□□□□ -0.17
AC044839.3-201ENST00000532068 PLCB2Q00722 1185 aa14.02□□□□□ -0.17
AC044839.3-201ENST00000532068 CUX2O14529 1486 aa13.97□□□□□ -0.17
AC044839.3-201ENST00000532068 PROM2Q8N271 834 aa13.94□□□□□ -0.18
AC044839.3-201ENST00000532068 MKRN4PQ13434 485 aaPredicted RBP13.92□□□□□ -0.18
AC044839.3-201ENST00000532068 HAP1P54257 671 aaPredicted RBP13.9□□□□□ -0.18
AC044839.3-201ENST00000532068 NCAPD3P42695 1498 aa13.89□□□□□ -0.19
AC044839.3-201ENST00000532068 TRHP20396 242 aaPredicted RBP13.88□□□□□ -0.19
AC044839.3-201ENST00000532068 IFNLR1Q8IU57 520 aaPredicted RBP13.83□□□□□ -0.2
AC044839.3-201ENST00000532068 ERCC6Q03468 1493 aa13.82□□□□□ -0.2
AC044839.3-201ENST00000532068 POLA2Q14181 598 aa13.82□□□□□ -0.2
AC044839.3-201ENST00000532068 ATAD2BQ9ULI0 1458 aa13.78□□□□□ -0.2
AC044839.3-201ENST00000532068 ZBTB12Q9Y330 459 aaPredicted RBP13.76□□□□□ -0.21
AC044839.3-201ENST00000532068 CAPN15O75808 1086 aa13.75□□□□□ -0.21
AC044839.3-201ENST00000532068 BCANQ96GW7 911 aa13.74□□□□□ -0.21
AC044839.3-201ENST00000532068 KLHL34Q8N239 644 aa13.71□□□□□ -0.21
AC044839.3-201ENST00000532068 SPINK5Q9NQ38 1064 aaPredicted RBP13.71□□□□□ -0.21
AC044839.3-201ENST00000532068 SMARCA4P51532 1647 aa13.71□□□□□ -0.22
AC044839.3-201ENST00000532068 HMGXB3Q12766 1538 aa13.69□□□□□ -0.22
AC044839.3-201ENST00000532068 PKD2Q13563 968 aa13.69□□□□□ -0.22
AC044839.3-201ENST00000532068 VSIG10Q8N0Z9 540 aa13.69□□□□□ -0.22
AC044839.3-201ENST00000532068 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.69□□□□□ -0.22
AC044839.3-201ENST00000532068 SMARCA2P51531 1590 aa13.68□□□□□ -0.22
AC044839.3-201ENST00000532068 NESP48681 1621 aa13.68□□□□□ -0.22
AC044839.3-201ENST00000532068 BAZ1AQ9NRL2 1556 aaPredicted RBP13.65□□□□□ -0.22
AC044839.3-201ENST00000532068 SPOCK2Q92563 424 aa13.64□□□□□ -0.23
AC044839.3-201ENST00000532068 PEG3Q9GZU2 1588 aa13.6□□□□□ -0.23
AC044839.3-201ENST00000532068 ECM2O94769 699 aaPredicted RBP13.58□□□□□ -0.24
AC044839.3-201ENST00000532068 STAG3Q9UJ98 1225 aa13.58□□□□□ -0.24
AC044839.3-201ENST00000532068 BAZ1BQ9UIG0 1483 aaKnown RBP13.57□□□□□ -0.24
AC044839.3-201ENST00000532068 BBXQ8WY36 941 aaPredicted RBP13.57□□□□□ -0.24
AC044839.3-201ENST00000532068 THOC2Q8NI27 1593 aaKnown RBP13.57□□□□□ -0.24
AC044839.3-201ENST00000532068 RNF39Q9H2S5 420 aa13.55□□□□□ -0.24
AC044839.3-201ENST00000532068 LAMC3Q9Y6N6 1575 aa13.54□□□□□ -0.24
AC044839.3-201ENST00000532068 PLCD3Q8N3E9 789 aa13.53□□□□□ -0.24
AC044839.3-201ENST00000532068 C1QBPQ07021 282 aaKnown RBP13.52□□□□□ -0.25
AC044839.3-201ENST00000532068 PDS5BQ9NTI5 1447 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms