RNA–Protein interactions for RNA: ENST00000531919.1

PATL1-202, Transcript of PAT1 homolog 1, processing body mRNA decay factor, humanhuman

TSL 5

Gene PATL1, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PATL1-202ENST00000531919 AEBP2Q6ZN18 517 aaPredicted RBP16.52■□□□□ 0.24
PATL1-202ENST00000531919 CHIC1Q5VXU3 224 aa16.08■□□□□ 0.16
PATL1-202ENST00000531919 PHF23Q9BUL5 403 aaPredicted RBP14.11□□□□□ -0.15
PATL1-202ENST00000531919 SENP3Q9H4L4 574 aaPredicted RBP14.07□□□□□ -0.16
PATL1-202ENST00000531919 FOXD1Q16676 465 aa13.05□□□□□ -0.32
PATL1-202ENST00000531919 PLPPR3Q6T4P5 718 aa13.03□□□□□ -0.32
PATL1-202ENST00000531919 PPP6R1Q9UPN7 881 aa12.48□□□□□ -0.41
PATL1-202ENST00000531919 ADRA2BP18089 450 aa12.44□□□□□ -0.42
PATL1-202ENST00000531919 PIAS4Q8N2W9 510 aaPredicted RBP12.26□□□□□ -0.45
PATL1-202ENST00000531919 MSH5O43196 834 aa12.1□□□□□ -0.47
PATL1-202ENST00000531919 SCAF1Q9H7N4 1312 aaKnown RBP11.46□□□□□ -0.57
PATL1-202ENST00000531919 PPP4R3CPQ6ZMV5 832 aa11.45□□□□□ -0.58
PATL1-202ENST00000531919 MAPK8IP2Q13387 824 aaPredicted RBP11.32□□□□□ -0.6
PATL1-202ENST00000531919 DMRT2Q9Y5R5 561 aa11.22□□□□□ -0.61
PATL1-202ENST00000531919 CNKSR2Q8WXI2 1034 aa11.17□□□□□ -0.62
PATL1-202ENST00000531919 NCBP3Q53F19 620 aaKnown RBP11.15□□□□□ -0.62
PATL1-202ENST00000531919 POTEDQ86YR6 584 aa11.15□□□□□ -0.62
PATL1-202ENST00000531919 KCNA4P22459 653 aa11.05□□□□□ -0.64
PATL1-202ENST00000531919 RNF216Q9NWF9 866 aaPredicted RBP10.98□□□□□ -0.65
PATL1-202ENST00000531919 HOXD11P31277 338 aaPredicted RBP10.96□□□□□ -0.65
PATL1-202ENST00000531919 NPM3O75607 178 aaKnown RBP10.95□□□□□ -0.66
PATL1-202ENST00000531919 DNAJC5BQ9UF47 199 aa10.74□□□□□ -0.69
PATL1-202ENST00000531919 DCAF8L1A6NGE4 600 aa10.68□□□□□ -0.7
PATL1-202ENST00000531919 SLC4A1APQ9BWU0 796 aaKnown RBP10.52□□□□□ -0.73
PATL1-202ENST00000531919 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.41□□□□□ -0.74
PATL1-202ENST00000531919 SLC4A2P04920 1241 aa10.36□□□□□ -0.75
PATL1-202ENST00000531919 RNF39Q9H2S5 420 aa10.35□□□□□ -0.75
PATL1-202ENST00000531919 C1QBPQ07021 282 aaKnown RBP10.24□□□□□ -0.77
PATL1-202ENST00000531919 U3KPZ7 1027 aaPredicted RBP10.23□□□□□ -0.77
PATL1-202ENST00000531919 FOXD4L1Q9NU39 408 aa10.22□□□□□ -0.77
PATL1-202ENST00000531919 ZBTB22O15209 634 aa10.15□□□□□ -0.78
PATL1-202ENST00000531919 MYCNP04198 464 aaPredicted RBP10.14□□□□□ -0.79
PATL1-202ENST00000531919 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.13□□□□□ -0.79
PATL1-202ENST00000531919 CACNB1Q02641 598 aaPredicted RBP10.13□□□□□ -0.79
PATL1-202ENST00000531919 HNRNPUL2Q1KMD3 747 aaKnown RBP10.13□□□□□ -0.79
PATL1-202ENST00000531919 SAMD1Q6SPF0 538 aaPredicted RBP10.07□□□□□ -0.8
PATL1-202ENST00000531919 EHMT2Q96KQ7 1210 aa10.06□□□□□ -0.8
PATL1-202ENST00000531919 CSRNP3Q8WYN3 585 aa10.05□□□□□ -0.8
PATL1-202ENST00000531919 APLP2Q06481 763 aa10.04□□□□□ -0.8
PATL1-202ENST00000531919 SPINK5Q9NQ38 1064 aaPredicted RBP9.95□□□□□ -0.82
PATL1-202ENST00000531919 CAPN15O75808 1086 aa9.93□□□□□ -0.82
PATL1-202ENST00000531919 ATXN8OSP0DMR3 200 aa9.92□□□□□ -0.82
PATL1-202ENST00000531919 ZNF219Q9P2Y4 722 aaPredicted RBP9.89□□□□□ -0.83
PATL1-202ENST00000531919 TRHP20396 242 aaPredicted RBP9.85□□□□□ -0.83
PATL1-202ENST00000531919 ATF5Q9Y2D1 282 aaPredicted RBP9.83□□□□□ -0.84
PATL1-202ENST00000531919 DSG3P32926 999 aa9.81□□□□□ -0.84
PATL1-202ENST00000531919 POLA2Q14181 598 aa9.7□□□□□ -0.86
PATL1-202ENST00000531919 ABCB7O75027 752 aa9.69□□□□□ -0.86
PATL1-202ENST00000531919 ZBTB12Q9Y330 459 aaPredicted RBP9.56□□□□□ -0.88
PATL1-202ENST00000531919 FBLN2P98095 1184 aa9.46□□□□□ -0.9
PATL1-202ENST00000531919 MKRN4PQ13434 485 aaPredicted RBP9.41□□□□□ -0.9
PATL1-202ENST00000531919 RBM42Q9BTD8 480 aaKnown RBP9.38□□□□□ -0.91
PATL1-202ENST00000531919 OSCARQ8IYS5 282 aa9.34□□□□□ -0.91
PATL1-202ENST00000531919 SPDYE2BA6NHP3 402 aa9.29□□□□□ -0.92
PATL1-202ENST00000531919 SPDYE6P0CI01 402 aa9.29□□□□□ -0.92
PATL1-202ENST00000531919 SPDYE2Q495Y8 402 aa9.29□□□□□ -0.92
PATL1-202ENST00000531919 AKT1S1Q96B36 256 aa9.24□□□□□ -0.93
PATL1-202ENST00000531919 ZNF692Q9BU19 519 aaPredicted RBP9.23□□□□□ -0.93
PATL1-202ENST00000531919 SSUH2Q9Y2M2 353 aa9.2□□□□□ -0.94
PATL1-202ENST00000531919 SPDYE4A6NLX3 237 aa9.17□□□□□ -0.94
PATL1-202ENST00000531919 REM2Q8IYK8 340 aaPredicted RBP9.12□□□□□ -0.95
PATL1-202ENST00000531919 PABPN1Q86U42 306 aaKnown RBP eCLIP9.08□□□□□ -0.96
PATL1-202ENST00000531919 FKBP8Q14318 412 aa9.07□□□□□ -0.96
PATL1-202ENST00000531919 PROM2Q8N271 834 aa9.04□□□□□ -0.96
PATL1-202ENST00000531919 SPDYE1Q8NFV5 336 aaPredicted RBP9.03□□□□□ -0.96
PATL1-202ENST00000531919 PITPNM1O00562 1244 aa9□□□□□ -0.97
PATL1-202ENST00000531919 CHRDL2Q6WN34 429 aa8.99□□□□□ -0.97
PATL1-202ENST00000531919 STAG3Q9UJ98 1225 aa8.96□□□□□ -0.98
PATL1-202ENST00000531919 CLEC11AQ9Y240 323 aa8.95□□□□□ -0.98
PATL1-202ENST00000531919 PRR29P0C7W0 189 aa8.89□□□□□ -0.99
PATL1-202ENST00000531919 FXR2P51116 673 aaKnown RBP eCLIP8.89□□□□□ -0.99
PATL1-202ENST00000531919 PIP4P2Q8N4L2 257 aa8.85□□□□□ -0.99
PATL1-202ENST00000531919 FBXO3Q9UK99 471 aa8.83□□□□□ -1
PATL1-202ENST00000531919 POTEHQ6S545 545 aa8.82□□□□□ -1
PATL1-202ENST00000531919 PRKAR2AP13861 404 aaKnown RBP8.78□□□□□ -1
PATL1-202ENST00000531919 CREBZFQ9NS37 354 aa8.75□□□□□ -1.01
PATL1-202ENST00000531919 CHADLQ6NUI6 762 aa8.73□□□□□ -1.01
PATL1-202ENST00000531919 MIER1Q8N108 512 aa8.71□□□□□ -1.02
PATL1-202ENST00000531919 PLEKHG5O94827 1062 aa8.7□□□□□ -1.02
PATL1-202ENST00000531919 FARP1Q9Y4F1 1045 aaPredicted RBP8.68□□□□□ -1.02
PATL1-202ENST00000531919 PLCD3Q8N3E9 789 aa8.67□□□□□ -1.02
PATL1-202ENST00000531919 MNX1P50219 401 aaPredicted RBP8.66□□□□□ -1.02
PATL1-202ENST00000531919 VASPP50552 380 aaPredicted RBP8.66□□□□□ -1.02
PATL1-202ENST00000531919 NPM1P06748 294 aaKnown RBP eCLIP8.63□□□□□ -1.03
PATL1-202ENST00000531919 ZBTB47Q9UFB7 747 aaPredicted RBP8.63□□□□□ -1.03
PATL1-202ENST00000531919 HAX1O00165 279 aa8.59□□□□□ -1.03
PATL1-202ENST00000531919 C19orf67A6NJJ6 358 aa8.58□□□□□ -1.04
PATL1-202ENST00000531919 IFNLR1Q8IU57 520 aaPredicted RBP8.55□□□□□ -1.04
PATL1-202ENST00000531919 KLHL34Q8N239 644 aa8.54□□□□□ -1.04
PATL1-202ENST00000531919 CD44P16070 742 aaKnown RBP8.52□□□□□ -1.05
PATL1-202ENST00000531919 NUBP1P53384 320 aa8.51□□□□□ -1.05
PATL1-202ENST00000531919 EVX2Q03828 476 aa8.5□□□□□ -1.05
PATL1-202ENST00000531919 PAK3O75914 559 aaPredicted RBP8.49□□□□□ -1.05
PATL1-202ENST00000531919 SPOCK2Q92563 424 aa8.48□□□□□ -1.05
PATL1-202ENST00000531919 RASEFQ8IZ41 740 aa8.46□□□□□ -1.06
PATL1-202ENST00000531919 ZRANB1Q9UGI0 708 aa8.46□□□□□ -1.06
PATL1-202ENST00000531919 CLCN6P51797 869 aa8.44□□□□□ -1.06
PATL1-202ENST00000531919 SP7Q8TDD2 431 aaPredicted RBP8.44□□□□□ -1.06
PATL1-202ENST00000531919 FAM212AQ96EL1 285 aa8.43□□□□□ -1.06
PATL1-202ENST00000531919 TSPYL2Q9H2G4 693 aaPredicted RBP8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms