RNA–Protein interactions for RNA: ENST00000531402.5

LINC00958-205, long intergenic non-protein coding RNA 958, humanhuman

TSL 4

Gene LINC00958, Length 590 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00958-205ENST00000531402 AEBP2Q6ZN18 517 aaPredicted RBP20.88■□□□□ 0.93
LINC00958-205ENST00000531402 CHIC1Q5VXU3 224 aa19.47■□□□□ 0.71
LINC00958-205ENST00000531402 SENP3Q9H4L4 574 aaPredicted RBP17.71■□□□□ 0.43
LINC00958-205ENST00000531402 PHF23Q9BUL5 403 aaPredicted RBP17.52■□□□□ 0.4
LINC00958-205ENST00000531402 FOXD1Q16676 465 aa16.64■□□□□ 0.25
LINC00958-205ENST00000531402 POTEDQ86YR6 584 aa15.73■□□□□ 0.11
LINC00958-205ENST00000531402 MSH5O43196 834 aa15.54■□□□□ 0.08
LINC00958-205ENST00000531402 PIAS4Q8N2W9 510 aaPredicted RBP15.48■□□□□ 0.07
LINC00958-205ENST00000531402 PPP6R1Q9UPN7 881 aa15.42■□□□□ 0.06
LINC00958-205ENST00000531402 PLPPR3Q6T4P5 718 aa15.41■□□□□ 0.06
LINC00958-205ENST00000531402 ADRA2BP18089 450 aa15.36■□□□□ 0.05
LINC00958-205ENST00000531402 MAPK8IP2Q13387 824 aaPredicted RBP14.22□□□□□ -0.13
LINC00958-205ENST00000531402 DMRT2Q9Y5R5 561 aa14.02□□□□□ -0.17
LINC00958-205ENST00000531402 SCAF1Q9H7N4 1312 aaKnown RBP13.86□□□□□ -0.19
LINC00958-205ENST00000531402 DCAF8L1A6NGE4 600 aa13.6□□□□□ -0.23
LINC00958-205ENST00000531402 CACNB1Q02641 598 aaPredicted RBP13.6□□□□□ -0.23
LINC00958-205ENST00000531402 PPP4R3CPQ6ZMV5 832 aa13.53□□□□□ -0.24
LINC00958-205ENST00000531402 HOXD11P31277 338 aaPredicted RBP13.38□□□□□ -0.27
LINC00958-205ENST00000531402 RNF39Q9H2S5 420 aa13.3□□□□□ -0.28
LINC00958-205ENST00000531402 CNKSR2Q8WXI2 1034 aa13.28□□□□□ -0.28
LINC00958-205ENST00000531402 RNF216Q9NWF9 866 aaPredicted RBP13.21□□□□□ -0.29
LINC00958-205ENST00000531402 C1QBPQ07021 282 aaKnown RBP13.02□□□□□ -0.33
LINC00958-205ENST00000531402 NCBP3Q53F19 620 aaKnown RBP12.84□□□□□ -0.35
LINC00958-205ENST00000531402 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.82□□□□□ -0.36
LINC00958-205ENST00000531402 DNAJC5BQ9UF47 199 aa12.82□□□□□ -0.36
LINC00958-205ENST00000531402 NPM3O75607 178 aaKnown RBP12.77□□□□□ -0.37
LINC00958-205ENST00000531402 U3KPZ7 1027 aaPredicted RBP12.54□□□□□ -0.4
LINC00958-205ENST00000531402 SPINK5Q9NQ38 1064 aaPredicted RBP12.49□□□□□ -0.41
LINC00958-205ENST00000531402 CAPN15O75808 1086 aa12.45□□□□□ -0.42
LINC00958-205ENST00000531402 DSG3P32926 999 aa12.39□□□□□ -0.43
LINC00958-205ENST00000531402 KCNA4P22459 653 aa12.35□□□□□ -0.43
LINC00958-205ENST00000531402 SLC4A2P04920 1241 aa12.28□□□□□ -0.44
LINC00958-205ENST00000531402 POTEHQ6S545 545 aa12.26□□□□□ -0.45
LINC00958-205ENST00000531402 TRHP20396 242 aaPredicted RBP12.22□□□□□ -0.45
LINC00958-205ENST00000531402 ABCB7O75027 752 aa12.2□□□□□ -0.46
LINC00958-205ENST00000531402 ZNF219Q9P2Y4 722 aaPredicted RBP12.04□□□□□ -0.48
LINC00958-205ENST00000531402 APLP2Q06481 763 aa11.98□□□□□ -0.49
LINC00958-205ENST00000531402 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.94□□□□□ -0.5
LINC00958-205ENST00000531402 HNRNPUL2Q1KMD3 747 aaKnown RBP11.94□□□□□ -0.5
LINC00958-205ENST00000531402 SAMD1Q6SPF0 538 aaPredicted RBP11.9□□□□□ -0.5
LINC00958-205ENST00000531402 POLA2Q14181 598 aa11.79□□□□□ -0.52
LINC00958-205ENST00000531402 MYCNP04198 464 aaPredicted RBP11.74□□□□□ -0.53
LINC00958-205ENST00000531402 RBM42Q9BTD8 480 aaKnown RBP11.73□□□□□ -0.53
LINC00958-205ENST00000531402 CHRDL2Q6WN34 429 aa11.67□□□□□ -0.54
LINC00958-205ENST00000531402 ATF5Q9Y2D1 282 aaPredicted RBP11.65□□□□□ -0.54
LINC00958-205ENST00000531402 SLC4A1APQ9BWU0 796 aaKnown RBP11.56□□□□□ -0.56
LINC00958-205ENST00000531402 FOXD4L1Q9NU39 408 aa11.51□□□□□ -0.57
LINC00958-205ENST00000531402 OSCARQ8IYS5 282 aa11.46□□□□□ -0.57
LINC00958-205ENST00000531402 AKT1S1Q96B36 256 aa11.43□□□□□ -0.58
LINC00958-205ENST00000531402 REM2Q8IYK8 340 aaPredicted RBP11.4□□□□□ -0.58
LINC00958-205ENST00000531402 ZBTB22O15209 634 aa11.38□□□□□ -0.59
LINC00958-205ENST00000531402 ZBTB12Q9Y330 459 aaPredicted RBP11.38□□□□□ -0.59
LINC00958-205ENST00000531402 PIP4P2Q8N4L2 257 aa11.36□□□□□ -0.59
LINC00958-205ENST00000531402 SP7Q8TDD2 431 aaPredicted RBP11.35□□□□□ -0.59
LINC00958-205ENST00000531402 PITPNM1O00562 1244 aa11.31□□□□□ -0.6
LINC00958-205ENST00000531402 HAX1O00165 279 aa11.24□□□□□ -0.61
LINC00958-205ENST00000531402 FXR2P51116 673 aaKnown RBP eCLIP11.2□□□□□ -0.62
LINC00958-205ENST00000531402 EVX2Q03828 476 aa11.15□□□□□ -0.62
LINC00958-205ENST00000531402 ATXN8OSP0DMR3 200 aa11.08□□□□□ -0.64
LINC00958-205ENST00000531402 FBLN2P98095 1184 aa11.06□□□□□ -0.64
LINC00958-205ENST00000531402 CLEC11AQ9Y240 323 aa11.06□□□□□ -0.64
LINC00958-205ENST00000531402 SPDYE2BA6NHP3 402 aa11.05□□□□□ -0.64
LINC00958-205ENST00000531402 SPDYE6P0CI01 402 aa11.05□□□□□ -0.64
LINC00958-205ENST00000531402 MKRN4PQ13434 485 aaPredicted RBP11.05□□□□□ -0.64
LINC00958-205ENST00000531402 SPDYE2Q495Y8 402 aa11.05□□□□□ -0.64
LINC00958-205ENST00000531402 PRKAR2AP13861 404 aaKnown RBP11.01□□□□□ -0.65
LINC00958-205ENST00000531402 ZNF692Q9BU19 519 aaPredicted RBP10.96□□□□□ -0.65
LINC00958-205ENST00000531402 SPDYE1Q8NFV5 336 aaPredicted RBP10.94□□□□□ -0.66
LINC00958-205ENST00000531402 CHADLQ6NUI6 762 aa10.91□□□□□ -0.66
LINC00958-205ENST00000531402 SSUH2Q9Y2M2 353 aa10.91□□□□□ -0.66
LINC00958-205ENST00000531402 C19orf67A6NJJ6 358 aa10.85□□□□□ -0.67
LINC00958-205ENST00000531402 PABPN1Q86U42 306 aaKnown RBP eCLIP10.81□□□□□ -0.68
LINC00958-205ENST00000531402 GABBR2O75899 941 aa10.8□□□□□ -0.68
LINC00958-205ENST00000531402 PRR29P0C7W0 189 aa10.76□□□□□ -0.69
LINC00958-205ENST00000531402 LHX8Q68G74 356 aa10.67□□□□□ -0.7
LINC00958-205ENST00000531402 CD44P16070 742 aaKnown RBP10.64□□□□□ -0.71
LINC00958-205ENST00000531402 POTEIP0CG38 1075 aa10.62□□□□□ -0.71
LINC00958-205ENST00000531402 FARP1Q9Y4F1 1045 aaPredicted RBP10.62□□□□□ -0.71
LINC00958-205ENST00000531402 NISCHQ9Y2I1 1504 aa10.62□□□□□ -0.71
LINC00958-205ENST00000531402 CSRNP3Q8WYN3 585 aa10.58□□□□□ -0.72
LINC00958-205ENST00000531402 CREBZFQ9NS37 354 aa10.46□□□□□ -0.73
LINC00958-205ENST00000531402 ZRANB1Q9UGI0 708 aa10.46□□□□□ -0.73
LINC00958-205ENST00000531402 DCBLD2Q96PD2 775 aa10.44□□□□□ -0.74
LINC00958-205ENST00000531402 GALR2O43603 387 aaPredicted RBP10.4□□□□□ -0.74
LINC00958-205ENST00000531402 ZNF579Q8NAF0 562 aaKnown RBP10.4□□□□□ -0.74
LINC00958-205ENST00000531402 EHMT2Q96KQ7 1210 aa10.4□□□□□ -0.74
LINC00958-205ENST00000531402 SPDYE4A6NLX3 237 aa10.36□□□□□ -0.75
LINC00958-205ENST00000531402 PHF12Q96QT6 1004 aa10.35□□□□□ -0.75
LINC00958-205ENST00000531402 CLCN6P51797 869 aa10.32□□□□□ -0.76
LINC00958-205ENST00000531402 STAG3Q9UJ98 1225 aa10.32□□□□□ -0.76
LINC00958-205ENST00000531402 POTEB2H3BUK9 544 aa10.28□□□□□ -0.76
LINC00958-205ENST00000531402 PLSCR2Q9NRY7 297 aa10.28□□□□□ -0.76
LINC00958-205ENST00000531402 OTUD5Q96G74 571 aa10.25□□□□□ -0.77
LINC00958-205ENST00000531402 PAK3O75914 559 aaPredicted RBP10.24□□□□□ -0.77
LINC00958-205ENST00000531402 MNX1P50219 401 aaPredicted RBP10.24□□□□□ -0.77
LINC00958-205ENST00000531402 PELP1Q8IZL8 1130 aaKnown RBP10.24□□□□□ -0.77
LINC00958-205ENST00000531402 NPM1P06748 294 aaKnown RBP eCLIP10.17□□□□□ -0.78
LINC00958-205ENST00000531402 MS4A3Q96HJ5 214 aa10.17□□□□□ -0.78
LINC00958-205ENST00000531402 TSPYL2Q9H2G4 693 aaPredicted RBP10.13□□□□□ -0.79
LINC00958-205ENST00000531402 METRNQ9UJH8 293 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms