RNA–Protein interactions for RNA: ENST00000531387.5

CARS-215, Transcript of cysteinyl-tRNA synthetase, humanhuman

TSL 2

Gene CARS, Length 2,805 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARS-215ENST00000531387 NISCHQ9Y2I1 1504 aa22.36■■□□□ 1.17
CARS-215ENST00000531387 SHROOM4Q9ULL8 1493 aa19.24■□□□□ 0.67
CARS-215ENST00000531387 CCDC180Q9P1Z9 1646 aa19■□□□□ 0.63
CARS-215ENST00000531387 ZCCHC6Q5VYS8 1495 aaKnown RBP18.92■□□□□ 0.62
CARS-215ENST00000531387 SUPT5HO00267 1087 aaKnown RBP18.76■□□□□ 0.59
CARS-215ENST00000531387 DCAF8L2P0C7V8 631 aa18.7■□□□□ 0.58
CARS-215ENST00000531387 DCAF1Q9Y4B6 1507 aa18.23■□□□□ 0.51
CARS-215ENST00000531387 MYO15BQ96JP2 1530 aa18.2■□□□□ 0.5
CARS-215ENST00000531387 CHIC1Q5VXU3 224 aa18.13■□□□□ 0.49
CARS-215ENST00000531387 SCRIBQ14160 1630 aa17.98■□□□□ 0.47
CARS-215ENST00000531387 ABCC9O60706 1549 aa17.87■□□□□ 0.45
CARS-215ENST00000531387 RSF1Q96T23 1441 aaPredicted RBP17.7■□□□□ 0.42
CARS-215ENST00000531387 LOC105371045A0A1W2PR82 267 aa17.7■□□□□ 0.42
CARS-215ENST00000531387 RB1CC1Q8TDY2 1594 aa17.62■□□□□ 0.41
CARS-215ENST00000531387 PCGF6Q9BYE7 350 aa17.57■□□□□ 0.4
CARS-215ENST00000531387 CECR2Q9BXF3 1484 aa17.56■□□□□ 0.4
CARS-215ENST00000531387 NACADO15069 1562 aa17.55■□□□□ 0.4
CARS-215ENST00000531387 MROH2BQ7Z745 1585 aa17.47■□□□□ 0.39
CARS-215ENST00000531387 HRCP23327 699 aa17.43■□□□□ 0.38
CARS-215ENST00000531387 WIZO95785 1651 aa17.41■□□□□ 0.38
CARS-215ENST00000531387 FAM9AQ8IZU1 332 aaPredicted RBP17.39■□□□□ 0.37
CARS-215ENST00000531387 TRIM41Q8WV44 630 aa17.38■□□□□ 0.37
CARS-215ENST00000531387 EHMT2Q96KQ7 1210 aa17.36■□□□□ 0.37
CARS-215ENST00000531387 PPARGC1BQ86YN6 1023 aaKnown RBP17.29■□□□□ 0.36
CARS-215ENST00000531387 UNC13AQ9UPW8 1703 aa17.24■□□□□ 0.35
CARS-215ENST00000531387 BAZ1AQ9NRL2 1556 aaPredicted RBP17.2■□□□□ 0.34
CARS-215ENST00000531387 TRIM26Q12899 539 aaPredicted RBP17.11■□□□□ 0.33
CARS-215ENST00000531387 EIF4G1Q04637 1599 aaKnown RBP17.1■□□□□ 0.33
CARS-215ENST00000531387 SMARCA4P51532 1647 aa17.09■□□□□ 0.33
CARS-215ENST00000531387 PABPN1Q86U42 306 aaKnown RBP eCLIP17.05■□□□□ 0.32
CARS-215ENST00000531387 ABCC8Q09428 1581 aa17.03■□□□□ 0.32
CARS-215ENST00000531387 TOP2AP11388 1531 aaKnown RBP17.02■□□□□ 0.31
CARS-215ENST00000531387 CCDC88BA6NC98 1476 aa16.99■□□□□ 0.31
CARS-215ENST00000531387 SMARCA2P51531 1590 aa16.98■□□□□ 0.31
CARS-215ENST00000531387 BICRAQ9NZM4 1560 aa16.95■□□□□ 0.3
CARS-215ENST00000531387 SOGA1O94964 1423 aa16.81■□□□□ 0.28
CARS-215ENST00000531387 RUSC2Q8N2Y8 1516 aa16.78■□□□□ 0.28
CARS-215ENST00000531387 TTBK1Q5TCY1 1321 aaPredicted RBP16.76■□□□□ 0.27
CARS-215ENST00000531387 PEG3Q9GZU2 1588 aa16.67■□□□□ 0.26
CARS-215ENST00000531387 CEP162Q5TB80 1403 aa16.65■□□□□ 0.26
CARS-215ENST00000531387 ATAD2BQ9ULI0 1458 aa16.63■□□□□ 0.25
CARS-215ENST00000531387 SYNJ1O43426 1573 aa16.63■□□□□ 0.25
CARS-215ENST00000531387 WRNQ14191 1432 aaPredicted RBP eCLIP16.62■□□□□ 0.25
CARS-215ENST00000531387 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.61■□□□□ 0.25
CARS-215ENST00000531387 BAZ1BQ9UIG0 1483 aaKnown RBP16.59■□□□□ 0.25
CARS-215ENST00000531387 CSRNP3Q8WYN3 585 aa16.59■□□□□ 0.25
CARS-215ENST00000531387 UBTFP17480 764 aaKnown RBP16.59■□□□□ 0.25
CARS-215ENST00000531387 ZEB1P37275 1124 aaPredicted RBP16.58■□□□□ 0.25
CARS-215ENST00000531387 TNIKQ9UKE5 1360 aa16.54■□□□□ 0.24
CARS-215ENST00000531387 EEA1Q15075 1411 aa16.5■□□□□ 0.23
CARS-215ENST00000531387 GOLGA3Q08378 1498 aa16.49■□□□□ 0.23
CARS-215ENST00000531387 CCER1Q8TC90 406 aaPredicted RBP16.46■□□□□ 0.23
CARS-215ENST00000531387 RANGAP1P46060 587 aaPredicted RBP16.44■□□□□ 0.22
CARS-215ENST00000531387 CEP164Q9UPV0 1460 aa16.39■□□□□ 0.21
CARS-215ENST00000531387 RAPGEF2Q9Y4G8 1499 aa16.39■□□□□ 0.21
CARS-215ENST00000531387 KIF21BO75037 1637 aa16.39■□□□□ 0.21
CARS-215ENST00000531387 TOP2BQ02880 1626 aa16.34■□□□□ 0.21
CARS-215ENST00000531387 CLIP1P30622 1438 aa16.33■□□□□ 0.21
CARS-215ENST00000531387 BIVM-ERCC5R4GMW8 1640 aa16.29■□□□□ 0.2
CARS-215ENST00000531387 HMGXB3Q12766 1538 aa16.26■□□□□ 0.19
CARS-215ENST00000531387 CUX1P39880 1505 aa16.25■□□□□ 0.19
CARS-215ENST00000531387 NCAPD3P42695 1498 aa16.25■□□□□ 0.19
CARS-215ENST00000531387 HNRNPUL2Q1KMD3 747 aaKnown RBP16.25■□□□□ 0.19
CARS-215ENST00000531387 VPS8Q8N3P4 1428 aa16.23■□□□□ 0.19
CARS-215ENST00000531387 PELP1Q8IZL8 1130 aaKnown RBP16.18■□□□□ 0.18
CARS-215ENST00000531387 CFTRP13569 1480 aa16.14■□□□□ 0.17
CARS-215ENST00000531387 PRXQ9BXM0 1461 aa16.14■□□□□ 0.17
CARS-215ENST00000531387 ARAP1Q96P48 1450 aa16.12■□□□□ 0.17
CARS-215ENST00000531387 SCAF1Q9H7N4 1312 aaKnown RBP16.11■□□□□ 0.17
CARS-215ENST00000531387 APLP2Q06481 763 aa16.11■□□□□ 0.17
CARS-215ENST00000531387 ERICH3Q5RHP9 1530 aa16.1■□□□□ 0.17
CARS-215ENST00000531387 DIEXFQ68CQ4 756 aaKnown RBP16.09■□□□□ 0.17
CARS-215ENST00000531387 KIF27Q86VH2 1401 aa16.06■□□□□ 0.16
CARS-215ENST00000531387 PRDM2Q13029 1718 aa16.06■□□□□ 0.16
CARS-215ENST00000531387 KANK4Q5T7N3 995 aaPredicted RBP16.06■□□□□ 0.16
CARS-215ENST00000531387 CUX2O14529 1486 aa16■□□□□ 0.15
CARS-215ENST00000531387 CC2D2AQ9P2K1 1620 aa16■□□□□ 0.15
CARS-215ENST00000531387 ARHGAP35Q9NRY4 1499 aa15.98■□□□□ 0.15
CARS-215ENST00000531387 NEUROD1Q13562 356 aa15.97■□□□□ 0.15
CARS-215ENST00000531387 CADPSQ9ULU8 1353 aa15.97■□□□□ 0.15
CARS-215ENST00000531387 FGD5Q6ZNL6 1462 aa15.96■□□□□ 0.15
CARS-215ENST00000531387 ZNF316A6NFI3 1004 aaPredicted RBP15.95■□□□□ 0.14
CARS-215ENST00000531387 IGF1RP08069 1367 aa15.93■□□□□ 0.14
CARS-215ENST00000531387 NESP48681 1621 aa15.89■□□□□ 0.13
CARS-215ENST00000531387 ACIN1Q9UKV3 1341 aaKnown RBP15.89■□□□□ 0.13
CARS-215ENST00000531387 ITGAEP38570 1179 aa15.88■□□□□ 0.13
CARS-215ENST00000531387 FANCD2Q9BXW9 1451 aa15.87■□□□□ 0.13
CARS-215ENST00000531387 RAD54L2Q9Y4B4 1467 aa15.86■□□□□ 0.13
CARS-215ENST00000531387 CARMIL1Q5VZK9 1371 aa15.86■□□□□ 0.13
CARS-215ENST00000531387 DHX57Q6P158 1386 aaKnown RBP15.85■□□□□ 0.13
CARS-215ENST00000531387 P3H3Q8IVL6 736 aa15.85■□□□□ 0.13
CARS-215ENST00000531387 YTHDC1Q96MU7 727 aaKnown RBP15.84■□□□□ 0.13
CARS-215ENST00000531387 RRBP1Q9P2E9 1410 aaKnown RBP15.83■□□□□ 0.12
CARS-215ENST00000531387 MIER1Q8N108 512 aa15.81■□□□□ 0.12
CARS-215ENST00000531387 CCNB3Q8WWL7 1395 aa15.79■□□□□ 0.12
CARS-215ENST00000531387 TIAM1Q13009 1591 aa15.78■□□□□ 0.12
CARS-215ENST00000531387 DNAJC5BQ9UF47 199 aa15.78■□□□□ 0.12
CARS-215ENST00000531387 POLA1P09884 1462 aaPredicted RBP15.77■□□□□ 0.12
CARS-215ENST00000531387 GTF3C3Q9Y5Q9 886 aa15.77■□□□□ 0.11
CARS-215ENST00000531387 TOPBP1Q92547 1522 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms