RNA–Protein interactions for RNA: ENST00000531114.5

PDZD3-212, Transcript of PDZ domain containing 3, humanhuman

TSL 2 BASIC

Gene PDZD3, Length 2,996 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD3-212ENST00000531114 NISCHQ9Y2I1 1504 aa32.97■■■□□ 2.87
PDZD3-212ENST00000531114 CCDC180Q9P1Z9 1646 aa28.08■■■□□ 2.09
PDZD3-212ENST00000531114 SHROOM4Q9ULL8 1493 aa28.03■■■□□ 2.08
PDZD3-212ENST00000531114 DCAF8L2P0C7V8 631 aa27.89■■■□□ 2.05
PDZD3-212ENST00000531114 ZCCHC6Q5VYS8 1495 aaKnown RBP27.74■■■□□ 2.03
PDZD3-212ENST00000531114 SUPT5HO00267 1087 aaKnown RBP27.25■■□□□ 1.95
PDZD3-212ENST00000531114 DCAF1Q9Y4B6 1507 aa26.91■■□□□ 1.9
PDZD3-212ENST00000531114 ABCC9O60706 1549 aa26.84■■□□□ 1.89
PDZD3-212ENST00000531114 SCRIBQ14160 1630 aa26.48■■□□□ 1.83
PDZD3-212ENST00000531114 MYO15BQ96JP2 1530 aa26.3■■□□□ 1.8
PDZD3-212ENST00000531114 NACADO15069 1562 aa26.19■■□□□ 1.78
PDZD3-212ENST00000531114 CHIC1Q5VXU3 224 aa26.11■■□□□ 1.77
PDZD3-212ENST00000531114 RSF1Q96T23 1441 aaPredicted RBP25.96■■□□□ 1.75
PDZD3-212ENST00000531114 RB1CC1Q8TDY2 1594 aa25.91■■□□□ 1.74
PDZD3-212ENST00000531114 CECR2Q9BXF3 1484 aa25.89■■□□□ 1.73
PDZD3-212ENST00000531114 PABPN1Q86U42 306 aaKnown RBP eCLIP25.68■■□□□ 1.7
PDZD3-212ENST00000531114 MROH2BQ7Z745 1585 aa25.68■■□□□ 1.7
PDZD3-212ENST00000531114 WIZO95785 1651 aa25.47■■□□□ 1.67
PDZD3-212ENST00000531114 UNC13AQ9UPW8 1703 aa25.45■■□□□ 1.66
PDZD3-212ENST00000531114 LOC105371045A0A1W2PR82 267 aa25.44■■□□□ 1.66
PDZD3-212ENST00000531114 TRIM41Q8WV44 630 aa25.32■■□□□ 1.64
PDZD3-212ENST00000531114 BAZ1AQ9NRL2 1556 aaPredicted RBP25.32■■□□□ 1.64
PDZD3-212ENST00000531114 BICRAQ9NZM4 1560 aa25.26■■□□□ 1.63
PDZD3-212ENST00000531114 FAM9AQ8IZU1 332 aaPredicted RBP25.26■■□□□ 1.63
PDZD3-212ENST00000531114 SMARCA4P51532 1647 aa25.18■■□□□ 1.62
PDZD3-212ENST00000531114 EHMT2Q96KQ7 1210 aa25.17■■□□□ 1.62
PDZD3-212ENST00000531114 CCDC88BA6NC98 1476 aa24.99■■□□□ 1.59
PDZD3-212ENST00000531114 TOP2AP11388 1531 aaKnown RBP24.99■■□□□ 1.59
PDZD3-212ENST00000531114 SMARCA2P51531 1590 aa24.87■■□□□ 1.57
PDZD3-212ENST00000531114 PCGF6Q9BYE7 350 aa24.84■■□□□ 1.57
PDZD3-212ENST00000531114 ABCC8Q09428 1581 aa24.79■■□□□ 1.56
PDZD3-212ENST00000531114 EIF4G1Q04637 1599 aaKnown RBP24.76■■□□□ 1.55
PDZD3-212ENST00000531114 ATAD2BQ9ULI0 1458 aa24.75■■□□□ 1.55
PDZD3-212ENST00000531114 BAZ1BQ9UIG0 1483 aaKnown RBP24.65■■□□□ 1.54
PDZD3-212ENST00000531114 PEG3Q9GZU2 1588 aa24.64■■□□□ 1.53
PDZD3-212ENST00000531114 SOGA1O94964 1423 aa24.5■■□□□ 1.51
PDZD3-212ENST00000531114 PPARGC1BQ86YN6 1023 aaKnown RBP24.43■■□□□ 1.5
PDZD3-212ENST00000531114 RUSC2Q8N2Y8 1516 aa24.42■■□□□ 1.5
PDZD3-212ENST00000531114 WRNQ14191 1432 aaPredicted RBP eCLIP24.4■■□□□ 1.5
PDZD3-212ENST00000531114 TRIM26Q12899 539 aaPredicted RBP24.34■■□□□ 1.49
PDZD3-212ENST00000531114 HRCP23327 699 aa24.32■■□□□ 1.48
PDZD3-212ENST00000531114 NCAPD3P42695 1498 aa24.32■■□□□ 1.48
PDZD3-212ENST00000531114 CSRNP3Q8WYN3 585 aa24.3■■□□□ 1.48
PDZD3-212ENST00000531114 SYNJ1O43426 1573 aa24.26■■□□□ 1.47
PDZD3-212ENST00000531114 UBTFP17480 764 aaKnown RBP24.25■■□□□ 1.47
PDZD3-212ENST00000531114 HMGXB3Q12766 1538 aa24.18■■□□□ 1.46
PDZD3-212ENST00000531114 TTBK1Q5TCY1 1321 aaPredicted RBP24.17■■□□□ 1.46
PDZD3-212ENST00000531114 RANGAP1P46060 587 aaPredicted RBP24.08■■□□□ 1.44
PDZD3-212ENST00000531114 EEA1Q15075 1411 aa24.06■■□□□ 1.44
PDZD3-212ENST00000531114 CEP162Q5TB80 1403 aa24.06■■□□□ 1.44
PDZD3-212ENST00000531114 CC2D2AQ9P2K1 1620 aa24.02■■□□□ 1.44
PDZD3-212ENST00000531114 TNIKQ9UKE5 1360 aa24.01■■□□□ 1.43
PDZD3-212ENST00000531114 CFTRP13569 1480 aa23.99■■□□□ 1.43
PDZD3-212ENST00000531114 GOLGA3Q08378 1498 aa23.95■■□□□ 1.43
PDZD3-212ENST00000531114 TOP2BQ02880 1626 aa23.93■■□□□ 1.42
PDZD3-212ENST00000531114 CUX1P39880 1505 aa23.91■■□□□ 1.42
PDZD3-212ENST00000531114 DNAJC5BQ9UF47 199 aa23.9■■□□□ 1.42
PDZD3-212ENST00000531114 CADPSQ9ULU8 1353 aa23.89■■□□□ 1.41
PDZD3-212ENST00000531114 RAPGEF2Q9Y4G8 1499 aa23.88■■□□□ 1.41
PDZD3-212ENST00000531114 CEP164Q9UPV0 1460 aa23.87■■□□□ 1.41
PDZD3-212ENST00000531114 BIVM-ERCC5R4GMW8 1640 aa23.79■■□□□ 1.4
PDZD3-212ENST00000531114 NESP48681 1621 aa23.74■■□□□ 1.39
PDZD3-212ENST00000531114 CLIP1P30622 1438 aa23.74■■□□□ 1.39
PDZD3-212ENST00000531114 KIF21BO75037 1637 aa23.73■■□□□ 1.39
PDZD3-212ENST00000531114 PELP1Q8IZL8 1130 aaKnown RBP23.71■■□□□ 1.39
PDZD3-212ENST00000531114 KIF27Q86VH2 1401 aa23.68■■□□□ 1.38
PDZD3-212ENST00000531114 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.65■■□□□ 1.38
PDZD3-212ENST00000531114 FANCD2Q9BXW9 1451 aa23.65■■□□□ 1.38
PDZD3-212ENST00000531114 CUX2O14529 1486 aa23.62■■□□□ 1.37
PDZD3-212ENST00000531114 PRXQ9BXM0 1461 aa23.62■■□□□ 1.37
PDZD3-212ENST00000531114 FGD5Q6ZNL6 1462 aa23.59■■□□□ 1.37
PDZD3-212ENST00000531114 IGF1RP08069 1367 aa23.53■■□□□ 1.36
PDZD3-212ENST00000531114 APLP2Q06481 763 aa23.51■■□□□ 1.35
PDZD3-212ENST00000531114 PRDM2Q13029 1718 aa23.51■■□□□ 1.35
PDZD3-212ENST00000531114 RAD54L2Q9Y4B4 1467 aa23.51■■□□□ 1.35
PDZD3-212ENST00000531114 VPS8Q8N3P4 1428 aa23.5■■□□□ 1.35
PDZD3-212ENST00000531114 CCER1Q8TC90 406 aaPredicted RBP23.48■■□□□ 1.35
PDZD3-212ENST00000531114 SCAF1Q9H7N4 1312 aaKnown RBP23.46■■□□□ 1.35
PDZD3-212ENST00000531114 ERICH3Q5RHP9 1530 aa23.46■■□□□ 1.35
PDZD3-212ENST00000531114 ZEB1P37275 1124 aaPredicted RBP23.45■■□□□ 1.34
PDZD3-212ENST00000531114 HNRNPUL2Q1KMD3 747 aaKnown RBP23.43■■□□□ 1.34
PDZD3-212ENST00000531114 CARMIL1Q5VZK9 1371 aa23.43■■□□□ 1.34
PDZD3-212ENST00000531114 TOPBP1Q92547 1522 aa23.41■■□□□ 1.34
PDZD3-212ENST00000531114 POLA1P09884 1462 aaPredicted RBP23.38■■□□□ 1.33
PDZD3-212ENST00000531114 ARAP1Q96P48 1450 aa23.38■■□□□ 1.33
PDZD3-212ENST00000531114 P3H3Q8IVL6 736 aa23.36■■□□□ 1.33
PDZD3-212ENST00000531114 KANK4Q5T7N3 995 aaPredicted RBP23.35■■□□□ 1.33
PDZD3-212ENST00000531114 DNMBPQ6XZF7 1577 aa23.34■■□□□ 1.33
PDZD3-212ENST00000531114 URB2Q14146 1524 aaKnown RBP23.33■■□□□ 1.33
PDZD3-212ENST00000531114 TDRD9Q8NDG6 1382 aaKnown RBP23.32■■□□□ 1.32
PDZD3-212ENST00000531114 LAMC3Q9Y6N6 1575 aa23.29■■□□□ 1.32
PDZD3-212ENST00000531114 ARHGAP35Q9NRY4 1499 aa23.28■■□□□ 1.32
PDZD3-212ENST00000531114 PDS5BQ9NTI5 1447 aa23.27■■□□□ 1.32
PDZD3-212ENST00000531114 ABCA10Q8WWZ4 1543 aa23.23■■□□□ 1.31
PDZD3-212ENST00000531114 ATP1B4Q9UN42 357 aaPredicted RBP23.22■■□□□ 1.31
PDZD3-212ENST00000531114 KIF21AQ7Z4S6 1674 aa23.15■■□□□ 1.3
PDZD3-212ENST00000531114 ITGAEP38570 1179 aa23.08■■□□□ 1.29
PDZD3-212ENST00000531114 GAPVD1Q14C86 1478 aa23.06■■□□□ 1.28
PDZD3-212ENST00000531114 FHOD3Q2V2M9 1422 aa23.05■■□□□ 1.28
PDZD3-212ENST00000531114 AQRO60306 1485 aaKnown RBP eCLIP23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms