RNA–Protein interactions for RNA: ENST00000530843.1

NUP214-223, Transcript of nucleoporin 214, human

TSL 5

Gene NUP214, Length 189 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP214-223	ENST00000530843	AEBP2	Q6ZN18	517 aa	Predicted RBP	22.17	■■□□□ 1.14
NUP214-223	ENST00000530843	CHIC1	Q5VXU3	224 aa		21.53	■■□□□ 1.04
NUP214-223	ENST00000530843	PHF23	Q9BUL5	403 aa	Predicted RBP	18.99	■□□□□ 0.63
NUP214-223	ENST00000530843	SENP3	Q9H4L4	574 aa	Predicted RBP	18.71	■□□□□ 0.59
NUP214-223	ENST00000530843	FOXD1	Q16676	465 aa		17.45	■□□□□ 0.38
NUP214-223	ENST00000530843	PLPPR3	Q6T4P5	718 aa		17.4	■□□□□ 0.38
NUP214-223	ENST00000530843	PPP6R1	Q9UPN7	881 aa		16.78	■□□□□ 0.28
NUP214-223	ENST00000530843	ADRA2B	P18089	450 aa		16.73	■□□□□ 0.27
NUP214-223	ENST00000530843	PIAS4	Q8N2W9	510 aa	Predicted RBP	16.39	■□□□□ 0.21
NUP214-223	ENST00000530843	MSH5	O43196	834 aa		16.02	■□□□□ 0.16
NUP214-223	ENST00000530843	PPP4R3CP	Q6ZMV5	832 aa		15.37	■□□□□ 0.05
NUP214-223	ENST00000530843	MAPK8IP2	Q13387	824 aa	Predicted RBP	15.22	■□□□□ 0.03
NUP214-223	ENST00000530843	SCAF1	Q9H7N4	1312 aa	Known RBP	15.17	■□□□□ 0.02
NUP214-223	ENST00000530843	KCNA4	P22459	653 aa		14.98	□□□□□ -0.01
NUP214-223	ENST00000530843	DMRT2	Q9Y5R5	561 aa		14.96	□□□□□ -0.01
NUP214-223	ENST00000530843	CNKSR2	Q8WXI2	1034 aa		14.92	□□□□□ -0.02
NUP214-223	ENST00000530843	NCBP3	Q53F19	620 aa	Known RBP	14.86	□□□□□ -0.03
NUP214-223	ENST00000530843	POTED	Q86YR6	584 aa		14.78	□□□□□ -0.04
NUP214-223	ENST00000530843	NPM3	O75607	178 aa	Known RBP	14.75	□□□□□ -0.05
NUP214-223	ENST00000530843	RNF216	Q9NWF9	866 aa	Predicted RBP	14.65	□□□□□ -0.06
NUP214-223	ENST00000530843	HOXD11	P31277	338 aa	Predicted RBP	14.63	□□□□□ -0.07
NUP214-223	ENST00000530843	DNAJC5B	Q9UF47	199 aa		14.29	□□□□□ -0.12
NUP214-223	ENST00000530843	DCAF8L1	A6NGE4	600 aa		14.28	□□□□□ -0.12
NUP214-223	ENST00000530843	SLC4A1AP	Q9BWU0	796 aa	Known RBP	14.2	□□□□□ -0.14
NUP214-223	ENST00000530843	SLC4A2	P04920	1241 aa		13.98	□□□□□ -0.17
NUP214-223	ENST00000530843	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	13.9	□□□□□ -0.18	1e-8	■■□□□ 12
NUP214-223	ENST00000530843	ZBTB22	O15209	634 aa		13.83	□□□□□ -0.2
NUP214-223	ENST00000530843	RNF39	Q9H2S5	420 aa		13.77	□□□□□ -0.21
NUP214-223	ENST00000530843	EHMT2	Q96KQ7	1210 aa		13.76	□□□□□ -0.21
NUP214-223	ENST00000530843	FOXD4L1	Q9NU39	408 aa		13.75	□□□□□ -0.21
NUP214-223	ENST00000530843		U3KPZ7	1027 aa	Predicted RBP	13.74	□□□□□ -0.21
NUP214-223	ENST00000530843	CSRNP3	Q8WYN3	585 aa		13.66	□□□□□ -0.22
NUP214-223	ENST00000530843	MYCN	P04198	464 aa	Predicted RBP	13.58	□□□□□ -0.24
NUP214-223	ENST00000530843	C1QBP	Q07021	282 aa	Known RBP	13.56	□□□□□ -0.24
NUP214-223	ENST00000530843	CACNB1	Q02641	598 aa	Predicted RBP	13.43	□□□□□ -0.26
NUP214-223	ENST00000530843	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	13.41	□□□□□ -0.26
NUP214-223	ENST00000530843	HNRNPUL2	Q1KMD3	747 aa	Known RBP	13.41	□□□□□ -0.26
NUP214-223	ENST00000530843	SAMD1	Q6SPF0	538 aa	Predicted RBP	13.39	□□□□□ -0.27
NUP214-223	ENST00000530843	SPINK5	Q9NQ38	1064 aa	Predicted RBP	13.39	□□□□□ -0.27
NUP214-223	ENST00000530843	ATF5	Q9Y2D1	282 aa	Predicted RBP	13.33	□□□□□ -0.28
NUP214-223	ENST00000530843	CAPN15	O75808	1086 aa		13.26	□□□□□ -0.29
NUP214-223	ENST00000530843	APLP2	Q06481	763 aa		13.26	□□□□□ -0.29
NUP214-223	ENST00000530843	ATXN8OS	P0DMR3	200 aa		13.24	□□□□□ -0.29
NUP214-223	ENST00000530843	TRH	P20396	242 aa	Predicted RBP	13.21	□□□□□ -0.29
NUP214-223	ENST00000530843	ZNF219	Q9P2Y4	722 aa	Predicted RBP	13.15	□□□□□ -0.3
NUP214-223	ENST00000530843	DSG3	P32926	999 aa		13.09	□□□□□ -0.31
NUP214-223	ENST00000530843	ABCB7	O75027	752 aa		13.07	□□□□□ -0.32
NUP214-223	ENST00000530843	POLA2	Q14181	598 aa		12.99	□□□□□ -0.33
NUP214-223	ENST00000530843	MKRN4P	Q13434	485 aa	Predicted RBP	12.73	□□□□□ -0.37
NUP214-223	ENST00000530843	ZBTB12	Q9Y330	459 aa	Predicted RBP	12.68	□□□□□ -0.38
NUP214-223	ENST00000530843	FBLN2	P98095	1184 aa		12.63	□□□□□ -0.39
NUP214-223	ENST00000530843	OSCAR	Q8IYS5	282 aa		12.56	□□□□□ -0.4
NUP214-223	ENST00000530843	RBM42	Q9BTD8	480 aa	Known RBP	12.4	□□□□□ -0.42
NUP214-223	ENST00000530843	SPDYE2B	A6NHP3	402 aa		12.38	□□□□□ -0.43
NUP214-223	ENST00000530843	SPDYE6	P0CI01	402 aa		12.38	□□□□□ -0.43
NUP214-223	ENST00000530843	SPDYE2	Q495Y8	402 aa		12.38	□□□□□ -0.43
NUP214-223	ENST00000530843	SPDYE4	A6NLX3	237 aa		12.34	□□□□□ -0.43
NUP214-223	ENST00000530843	ZNF692	Q9BU19	519 aa	Predicted RBP	12.33	□□□□□ -0.44
NUP214-223	ENST00000530843	SSUH2	Q9Y2M2	353 aa		12.32	□□□□□ -0.44
NUP214-223	ENST00000530843	FKBP8	Q14318	412 aa		12.31	□□□□□ -0.44
NUP214-223	ENST00000530843	AKT1S1	Q96B36	256 aa		12.26	□□□□□ -0.45
NUP214-223	ENST00000530843	PABPN1	Q86U42	306 aa	Known RBP eCLIP	12.19	□□□□□ -0.46
NUP214-223	ENST00000530843	REM2	Q8IYK8	340 aa	Predicted RBP	12.18	□□□□□ -0.46
NUP214-223	ENST00000530843	PROM2	Q8N271	834 aa		12.16	□□□□□ -0.46
NUP214-223	ENST00000530843	PITPNM1	O00562	1244 aa		12.06	□□□□□ -0.48
NUP214-223	ENST00000530843	SPDYE1	Q8NFV5	336 aa	Predicted RBP	12.02	□□□□□ -0.49
NUP214-223	ENST00000530843	CLEC11A	Q9Y240	323 aa		12	□□□□□ -0.49
NUP214-223	ENST00000530843	CHRDL2	Q6WN34	429 aa		11.96	□□□□□ -0.49
NUP214-223	ENST00000530843	STAG3	Q9UJ98	1225 aa		11.9	□□□□□ -0.5
NUP214-223	ENST00000530843	PRR29	P0C7W0	189 aa		11.86	□□□□□ -0.51
NUP214-223	ENST00000530843	FXR2	P51116	673 aa	Known RBP eCLIP	11.84	□□□□□ -0.51
NUP214-223	ENST00000530843	PIP4P2	Q8N4L2	257 aa		11.83	□□□□□ -0.52
NUP214-223	ENST00000530843	FBXO3	Q9UK99	471 aa		11.81	□□□□□ -0.52
NUP214-223	ENST00000530843	CHADL	Q6NUI6	762 aa		11.76	□□□□□ -0.53
NUP214-223	ENST00000530843	CREBZF	Q9NS37	354 aa		11.76	□□□□□ -0.53
NUP214-223	ENST00000530843	PRKAR2A	P13861	404 aa	Known RBP	11.73	□□□□□ -0.53
NUP214-223	ENST00000530843	VASP	P50552	380 aa	Predicted RBP	11.72	□□□□□ -0.53
NUP214-223	ENST00000530843	MIER1	Q8N108	512 aa		11.68	□□□□□ -0.54
NUP214-223	ENST00000530843	POTEH	Q6S545	545 aa		11.66	□□□□□ -0.54
NUP214-223	ENST00000530843	MNX1	P50219	401 aa	Predicted RBP	11.65	□□□□□ -0.54
NUP214-223	ENST00000530843	PLCD3	Q8N3E9	789 aa		11.65	□□□□□ -0.54
NUP214-223	ENST00000530843	FARP1	Q9Y4F1	1045 aa	Predicted RBP	11.6	□□□□□ -0.55
NUP214-223	ENST00000530843	IFNLR1	Q8IU57	520 aa	Predicted RBP	11.59	□□□□□ -0.55
NUP214-223	ENST00000530843	PLEKHG5	O94827	1062 aa		11.54	□□□□□ -0.56
NUP214-223	ENST00000530843	KLHL34	Q8N239	644 aa		11.49	□□□□□ -0.57
NUP214-223	ENST00000530843	ZBTB47	Q9UFB7	747 aa	Predicted RBP	11.47	□□□□□ -0.57
NUP214-223	ENST00000530843	NPM1	P06748	294 aa	Known RBP eCLIP	11.46	□□□□□ -0.57
NUP214-223	ENST00000530843	NUBP1	P53384	320 aa		11.45	□□□□□ -0.58
NUP214-223	ENST00000530843	C19orf67	A6NJJ6	358 aa		11.44	□□□□□ -0.58
NUP214-223	ENST00000530843	RASEF	Q8IZ41	740 aa		11.43	□□□□□ -0.58
NUP214-223	ENST00000530843	HAX1	O00165	279 aa		11.42	□□□□□ -0.58
NUP214-223	ENST00000530843	EVX2	Q03828	476 aa		11.42	□□□□□ -0.58
NUP214-223	ENST00000530843	SPOCK2	Q92563	424 aa		11.41	□□□□□ -0.58
NUP214-223	ENST00000530843	CD44	P16070	742 aa	Known RBP	11.39	□□□□□ -0.59
NUP214-223	ENST00000530843	TSPYL2	Q9H2G4	693 aa	Predicted RBP	11.34	□□□□□ -0.59
NUP214-223	ENST00000530843	ZRANB1	Q9UGI0	708 aa		11.32	□□□□□ -0.6
NUP214-223	ENST00000530843	DCAF8	Q5TAQ9	597 aa		11.28	□□□□□ -0.6
NUP214-223	ENST00000530843	FAM212A	Q96EL1	285 aa		11.28	□□□□□ -0.6
NUP214-223	ENST00000530843	CCDC61	Q9Y6R9	512 aa		11.28	□□□□□ -0.6
NUP214-223	ENST00000530843	PAK3	O75914	559 aa	Predicted RBP	11.27	□□□□□ -0.61

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