RNA–Protein interactions for RNA: ENST00000530516.1

NUP98-218, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 391 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-218ENST00000530516 AEBP2Q6ZN18 517 aaPredicted RBP20.87■□□□□ 0.93
NUP98-218ENST00000530516 CHIC1Q5VXU3 224 aa19.97■□□□□ 0.79
NUP98-218ENST00000530516 SENP3Q9H4L4 574 aaPredicted RBP17.99■□□□□ 0.47
NUP98-218ENST00000530516 PHF23Q9BUL5 403 aaPredicted RBP17.66■□□□□ 0.42
NUP98-218ENST00000530516 FOXD1Q16676 465 aa16.63■□□□□ 0.25
NUP98-218ENST00000530516 PLPPR3Q6T4P5 718 aa16.03■□□□□ 0.16
NUP98-218ENST00000530516 MSH5O43196 834 aa15.71■□□□□ 0.11
NUP98-218ENST00000530516 PIAS4Q8N2W9 510 aaPredicted RBP15.6■□□□□ 0.09
NUP98-218ENST00000530516 PPP6R1Q9UPN7 881 aa15.49■□□□□ 0.07
NUP98-218ENST00000530516 ADRA2BP18089 450 aa15.47■□□□□ 0.07
NUP98-218ENST00000530516 POTEDQ86YR6 584 aa15.47■□□□□ 0.07
NUP98-218ENST00000530516 SCAF1Q9H7N4 1312 aaKnown RBP14.39□□□□□ -0.11
NUP98-218ENST00000530516 DMRT2Q9Y5R5 561 aa14.23□□□□□ -0.13
NUP98-218ENST00000530516 MAPK8IP2Q13387 824 aaPredicted RBP14.16□□□□□ -0.14
NUP98-218ENST00000530516 PPP4R3CPQ6ZMV5 832 aa13.98□□□□□ -0.17
NUP98-218ENST00000530516 CNKSR2Q8WXI2 1034 aa13.78□□□□□ -0.2
NUP98-218ENST00000530516 HOXD11P31277 338 aaPredicted RBP13.73□□□□□ -0.21
NUP98-218ENST00000530516 RNF216Q9NWF9 866 aaPredicted RBP13.65□□□□□ -0.22
NUP98-218ENST00000530516 DCAF8L1A6NGE4 600 aa13.58□□□□□ -0.24
NUP98-218ENST00000530516 NCBP3Q53F19 620 aaKnown RBP13.58□□□□□ -0.24
NUP98-218ENST00000530516 DNAJC5BQ9UF47 199 aa13.39□□□□□ -0.27
NUP98-218ENST00000530516 CACNB1Q02641 598 aaPredicted RBP13.38□□□□□ -0.27
NUP98-218ENST00000530516 RNF39Q9H2S5 420 aa13.33□□□□□ -0.28
NUP98-218ENST00000530516 NPM3O75607 178 aaKnown RBP13.24□□□□□ -0.29
NUP98-218ENST00000530516 C1QBPQ07021 282 aaKnown RBP13.22□□□□□ -0.29
NUP98-218ENST00000530516 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.07□□□□□ -0.325e-9■■■■■ 28.6
NUP98-218ENST00000530516 KCNA4P22459 653 aa12.96□□□□□ -0.33
NUP98-218ENST00000530516 U3KPZ7 1027 aaPredicted RBP12.74□□□□□ -0.37
NUP98-218ENST00000530516 APLP2Q06481 763 aa12.63□□□□□ -0.39
NUP98-218ENST00000530516 SLC4A2P04920 1241 aa12.6□□□□□ -0.39
NUP98-218ENST00000530516 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.59□□□□□ -0.39
NUP98-218ENST00000530516 HNRNPUL2Q1KMD3 747 aaKnown RBP12.59□□□□□ -0.39
NUP98-218ENST00000530516 CAPN15O75808 1086 aa12.55□□□□□ -0.4
NUP98-218ENST00000530516 SPINK5Q9NQ38 1064 aaPredicted RBP12.49□□□□□ -0.41
NUP98-218ENST00000530516 DSG3P32926 999 aa12.47□□□□□ -0.41
NUP98-218ENST00000530516 SAMD1Q6SPF0 538 aaPredicted RBP12.46□□□□□ -0.41
NUP98-218ENST00000530516 ZNF219Q9P2Y4 722 aaPredicted RBP12.44□□□□□ -0.42
NUP98-218ENST00000530516 MYCNP04198 464 aaPredicted RBP12.34□□□□□ -0.43
NUP98-218ENST00000530516 TRHP20396 242 aaPredicted RBP12.33□□□□□ -0.44
NUP98-218ENST00000530516 SLC4A1APQ9BWU0 796 aaKnown RBP12.31□□□□□ -0.44
NUP98-218ENST00000530516 FOXD4L1Q9NU39 408 aa12.19□□□□□ -0.46
NUP98-218ENST00000530516 ABCB7O75027 752 aa12.18□□□□□ -0.46
NUP98-218ENST00000530516 RBM42Q9BTD8 480 aaKnown RBP12.04□□□□□ -0.48
NUP98-218ENST00000530516 POTEHQ6S545 545 aa12.03□□□□□ -0.48
NUP98-218ENST00000530516 POLA2Q14181 598 aa12.01□□□□□ -0.49
NUP98-218ENST00000530516 ZBTB12Q9Y330 459 aaPredicted RBP11.95□□□□□ -0.5
NUP98-218ENST00000530516 ATXN8OSP0DMR3 200 aa11.9□□□□□ -0.5
NUP98-218ENST00000530516 ZBTB22O15209 634 aa11.86□□□□□ -0.51
NUP98-218ENST00000530516 ATF5Q9Y2D1 282 aaPredicted RBP11.86□□□□□ -0.51
NUP98-218ENST00000530516 AKT1S1Q96B36 256 aa11.71□□□□□ -0.53
NUP98-218ENST00000530516 CHRDL2Q6WN34 429 aa11.65□□□□□ -0.54
NUP98-218ENST00000530516 FBLN2P98095 1184 aa11.61□□□□□ -0.55
NUP98-218ENST00000530516 OSCARQ8IYS5 282 aa11.61□□□□□ -0.55
NUP98-218ENST00000530516 REM2Q8IYK8 340 aaPredicted RBP11.53□□□□□ -0.56
NUP98-218ENST00000530516 SPDYE2BA6NHP3 402 aa11.52□□□□□ -0.57
NUP98-218ENST00000530516 SPDYE6P0CI01 402 aa11.52□□□□□ -0.57
NUP98-218ENST00000530516 SPDYE2Q495Y8 402 aa11.52□□□□□ -0.57
NUP98-218ENST00000530516 CSRNP3Q8WYN3 585 aa11.39□□□□□ -0.59
NUP98-218ENST00000530516 PITPNM1O00562 1244 aa11.38□□□□□ -0.59
NUP98-218ENST00000530516 MKRN4PQ13434 485 aaPredicted RBP11.36□□□□□ -0.59
NUP98-218ENST00000530516 PIP4P2Q8N4L2 257 aa11.35□□□□□ -0.59
NUP98-218ENST00000530516 FXR2P51116 673 aaKnown RBP eCLIP11.32□□□□□ -0.6
NUP98-218ENST00000530516 ZNF692Q9BU19 519 aaPredicted RBP11.32□□□□□ -0.6
NUP98-218ENST00000530516 SPDYE1Q8NFV5 336 aaPredicted RBP11.31□□□□□ -0.6
NUP98-218ENST00000530516 SSUH2Q9Y2M2 353 aa11.31□□□□□ -0.6
NUP98-218ENST00000530516 EHMT2Q96KQ7 1210 aa11.22□□□□□ -0.61
NUP98-218ENST00000530516 SP7Q8TDD2 431 aaPredicted RBP11.2□□□□□ -0.62
NUP98-218ENST00000530516 CLEC11AQ9Y240 323 aa11.19□□□□□ -0.62
NUP98-218ENST00000530516 HAX1O00165 279 aa11.15□□□□□ -0.62
NUP98-218ENST00000530516 PABPN1Q86U42 306 aaKnown RBP eCLIP11.13□□□□□ -0.63
NUP98-218ENST00000530516 PRKAR2AP13861 404 aaKnown RBP11.11□□□□□ -0.63
NUP98-218ENST00000530516 PRR29P0C7W0 189 aa11.06□□□□□ -0.64
NUP98-218ENST00000530516 STAG3Q9UJ98 1225 aa10.97□□□□□ -0.65
NUP98-218ENST00000530516 C19orf67A6NJJ6 358 aa10.95□□□□□ -0.66
NUP98-218ENST00000530516 SPDYE4A6NLX3 237 aa10.92□□□□□ -0.66
NUP98-218ENST00000530516 CHADLQ6NUI6 762 aa10.9□□□□□ -0.66
NUP98-218ENST00000530516 EVX2Q03828 476 aa10.88□□□□□ -0.67
NUP98-218ENST00000530516 FARP1Q9Y4F1 1045 aaPredicted RBP10.84□□□□□ -0.67
NUP98-218ENST00000530516 CLCN6P51797 869 aa10.83□□□□□ -0.68
NUP98-218ENST00000530516 CD44P16070 742 aaKnown RBP10.77□□□□□ -0.69
NUP98-218ENST00000530516 GABBR2O75899 941 aa10.75□□□□□ -0.69
NUP98-218ENST00000530516 CREBZFQ9NS37 354 aa10.73□□□□□ -0.69
NUP98-218ENST00000530516 PROM2Q8N271 834 aa10.68□□□□□ -0.7
NUP98-218ENST00000530516 NPM1P06748 294 aaKnown RBP eCLIP10.67□□□□□ -0.7
NUP98-218ENST00000530516 PAK3O75914 559 aaPredicted RBP10.65□□□□□ -0.7
NUP98-218ENST00000530516 ZNF579Q8NAF0 562 aaKnown RBP10.64□□□□□ -0.71
NUP98-218ENST00000530516 ZRANB1Q9UGI0 708 aa10.61□□□□□ -0.71
NUP98-218ENST00000530516 PLEKHG5O94827 1062 aa10.55□□□□□ -0.72
NUP98-218ENST00000530516 MNX1P50219 401 aaPredicted RBP10.55□□□□□ -0.72
NUP98-218ENST00000530516 DCBLD2Q96PD2 775 aa10.53□□□□□ -0.72
NUP98-218ENST00000530516 LHX8Q68G74 356 aa10.49□□□□□ -0.73
NUP98-218ENST00000530516 POTEIP0CG38 1075 aa10.46□□□□□ -0.73
NUP98-218ENST00000530516 GALR2O43603 387 aaPredicted RBP10.41□□□□□ -0.74
NUP98-218ENST00000530516 MIER1Q8N108 512 aa10.41□□□□□ -0.74
NUP98-218ENST00000530516 ZBTB47Q9UFB7 747 aaPredicted RBP10.41□□□□□ -0.74
NUP98-218ENST00000530516 PHF12Q96QT6 1004 aa10.4□□□□□ -0.74
NUP98-218ENST00000530516 PLCD3Q8N3E9 789 aa10.36□□□□□ -0.75
NUP98-218ENST00000530516 FKBP8Q14318 412 aa10.35□□□□□ -0.75
NUP98-218ENST00000530516 TSPYL2Q9H2G4 693 aaPredicted RBP10.34□□□□□ -0.75
NUP98-218ENST00000530516 CCDC61Q9Y6R9 512 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms