RNA–Protein interactions for RNA: ENST00000530334.5

ACER3-208, Transcript of alkaline ceramidase 3, humanhuman

TSL 2

Gene ACER3, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACER3-208ENST00000530334 AEBP2Q6ZN18 517 aaPredicted RBP27.55■■■□□ 2
ACER3-208ENST00000530334 CHIC1Q5VXU3 224 aa25.5■■□□□ 1.67
ACER3-208ENST00000530334 SENP3Q9H4L4 574 aaPredicted RBP23.31■■□□□ 1.32
ACER3-208ENST00000530334 PHF23Q9BUL5 403 aaPredicted RBP23.03■■□□□ 1.28
ACER3-208ENST00000530334 FOXD1Q16676 465 aa21.96■■□□□ 1.11
ACER3-208ENST00000530334 POTEDQ86YR6 584 aa21.14■□□□□ 0.97
ACER3-208ENST00000530334 MSH5O43196 834 aa20.55■□□□□ 0.88
ACER3-208ENST00000530334 PLPPR3Q6T4P5 718 aa20.27■□□□□ 0.84
ACER3-208ENST00000530334 PIAS4Q8N2W9 510 aaPredicted RBP20.25■□□□□ 0.83
ACER3-208ENST00000530334 PPP6R1Q9UPN7 881 aa20.22■□□□□ 0.83
ACER3-208ENST00000530334 ADRA2BP18089 450 aa20.04■□□□□ 0.8
ACER3-208ENST00000530334 MAPK8IP2Q13387 824 aaPredicted RBP18.61■□□□□ 0.57
ACER3-208ENST00000530334 DMRT2Q9Y5R5 561 aa18.49■□□□□ 0.55
ACER3-208ENST00000530334 SCAF1Q9H7N4 1312 aaKnown RBP18.25■□□□□ 0.51
ACER3-208ENST00000530334 CACNB1Q02641 598 aaPredicted RBP17.96■□□□□ 0.47
ACER3-208ENST00000530334 PPP4R3CPQ6ZMV5 832 aa17.63■□□□□ 0.41
ACER3-208ENST00000530334 RNF39Q9H2S5 420 aa17.63■□□□□ 0.41
ACER3-208ENST00000530334 HOXD11P31277 338 aaPredicted RBP17.62■□□□□ 0.41
ACER3-208ENST00000530334 DCAF8L1A6NGE4 600 aa17.59■□□□□ 0.41
ACER3-208ENST00000530334 CNKSR2Q8WXI2 1034 aa17.44■□□□□ 0.38
ACER3-208ENST00000530334 RNF216Q9NWF9 866 aaPredicted RBP17.29■□□□□ 0.36
ACER3-208ENST00000530334 C1QBPQ07021 282 aaKnown RBP17.22■□□□□ 0.35
ACER3-208ENST00000530334 NCBP3Q53F19 620 aaKnown RBP17.16■□□□□ 0.34
ACER3-208ENST00000530334 DNAJC5BQ9UF47 199 aa17.07■□□□□ 0.32
ACER3-208ENST00000530334 NPM3O75607 178 aaKnown RBP16.67■□□□□ 0.26
ACER3-208ENST00000530334 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.63■□□□□ 0.25
ACER3-208ENST00000530334 U3KPZ7 1027 aaPredicted RBP16.41■□□□□ 0.22
ACER3-208ENST00000530334 POTEHQ6S545 545 aa16.39■□□□□ 0.21
ACER3-208ENST00000530334 SPINK5Q9NQ38 1064 aaPredicted RBP16.34■□□□□ 0.21
ACER3-208ENST00000530334 DSG3P32926 999 aa16.33■□□□□ 0.2
ACER3-208ENST00000530334 KCNA4P22459 653 aa16.25■□□□□ 0.19
ACER3-208ENST00000530334 CAPN15O75808 1086 aa16.16■□□□□ 0.18
ACER3-208ENST00000530334 APLP2Q06481 763 aa16.03■□□□□ 0.16
ACER3-208ENST00000530334 SLC4A2P04920 1241 aa16■□□□□ 0.15
ACER3-208ENST00000530334 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.96■□□□□ 0.15
ACER3-208ENST00000530334 HNRNPUL2Q1KMD3 747 aaKnown RBP15.96■□□□□ 0.15
ACER3-208ENST00000530334 ABCB7O75027 752 aa15.84■□□□□ 0.13
ACER3-208ENST00000530334 TRHP20396 242 aaPredicted RBP15.79■□□□□ 0.12
ACER3-208ENST00000530334 SAMD1Q6SPF0 538 aaPredicted RBP15.77■□□□□ 0.12
ACER3-208ENST00000530334 ZNF219Q9P2Y4 722 aaPredicted RBP15.75■□□□□ 0.11
ACER3-208ENST00000530334 MYCNP04198 464 aaPredicted RBP15.57■□□□□ 0.08
ACER3-208ENST00000530334 SLC4A1APQ9BWU0 796 aaKnown RBP15.46■□□□□ 0.07
ACER3-208ENST00000530334 CHRDL2Q6WN34 429 aa15.39■□□□□ 0.05
ACER3-208ENST00000530334 RBM42Q9BTD8 480 aaKnown RBP15.38■□□□□ 0.05
ACER3-208ENST00000530334 FOXD4L1Q9NU39 408 aa15.35■□□□□ 0.05
ACER3-208ENST00000530334 POLA2Q14181 598 aa15.3■□□□□ 0.04
ACER3-208ENST00000530334 ZBTB12Q9Y330 459 aaPredicted RBP15.16■□□□□ 0.02
ACER3-208ENST00000530334 SP7Q8TDD2 431 aaPredicted RBP15.1■□□□□ 0.01
ACER3-208ENST00000530334 ATF5Q9Y2D1 282 aaPredicted RBP15.1■□□□□ 0.01
ACER3-208ENST00000530334 ATXN8OSP0DMR3 200 aa15.06■□□□□ 0
ACER3-208ENST00000530334 AKT1S1Q96B36 256 aa15.01□□□□□ -0.01
ACER3-208ENST00000530334 PIP4P2Q8N4L2 257 aa14.98□□□□□ -0.01
ACER3-208ENST00000530334 EHMT2Q96KQ7 1210 aa14.96□□□□□ -0.01
ACER3-208ENST00000530334 REM2Q8IYK8 340 aaPredicted RBP14.94□□□□□ -0.02
ACER3-208ENST00000530334 ZBTB22O15209 634 aa14.86□□□□□ -0.03
ACER3-208ENST00000530334 OSCARQ8IYS5 282 aa14.86□□□□□ -0.03
ACER3-208ENST00000530334 PITPNM1O00562 1244 aa14.82□□□□□ -0.04
ACER3-208ENST00000530334 FXR2P51116 673 aaKnown RBP eCLIP14.81□□□□□ -0.04
ACER3-208ENST00000530334 EVX2Q03828 476 aa14.76□□□□□ -0.05
ACER3-208ENST00000530334 HAX1O00165 279 aa14.71□□□□□ -0.05
ACER3-208ENST00000530334 NISCHQ9Y2I1 1504 aa14.68□□□□□ -0.06
ACER3-208ENST00000530334 CSRNP3Q8WYN3 585 aa14.67□□□□□ -0.06
ACER3-208ENST00000530334 FBLN2P98095 1184 aa14.66□□□□□ -0.06
ACER3-208ENST00000530334 SPDYE2BA6NHP3 402 aa14.58□□□□□ -0.08
ACER3-208ENST00000530334 SPDYE6P0CI01 402 aa14.58□□□□□ -0.08
ACER3-208ENST00000530334 SPDYE2Q495Y8 402 aa14.58□□□□□ -0.08
ACER3-208ENST00000530334 PRKAR2AP13861 404 aaKnown RBP14.36□□□□□ -0.11
ACER3-208ENST00000530334 C19orf67A6NJJ6 358 aa14.35□□□□□ -0.11
ACER3-208ENST00000530334 MKRN4PQ13434 485 aaPredicted RBP14.35□□□□□ -0.11
ACER3-208ENST00000530334 SPDYE1Q8NFV5 336 aaPredicted RBP14.31□□□□□ -0.12
ACER3-208ENST00000530334 SSUH2Q9Y2M2 353 aa14.31□□□□□ -0.12
ACER3-208ENST00000530334 ZNF692Q9BU19 519 aaPredicted RBP14.29□□□□□ -0.12
ACER3-208ENST00000530334 GABBR2O75899 941 aa14.25□□□□□ -0.13
ACER3-208ENST00000530334 CLEC11AQ9Y240 323 aa14.23□□□□□ -0.13
ACER3-208ENST00000530334 CHADLQ6NUI6 762 aa14.16□□□□□ -0.14
ACER3-208ENST00000530334 LHX8Q68G74 356 aa14.14□□□□□ -0.15
ACER3-208ENST00000530334 POTEIP0CG38 1075 aa14.08□□□□□ -0.16
ACER3-208ENST00000530334 PABPN1Q86U42 306 aaKnown RBP eCLIP14.02□□□□□ -0.17
ACER3-208ENST00000530334 PRR29P0C7W0 189 aa13.98□□□□□ -0.17
ACER3-208ENST00000530334 STAG3Q9UJ98 1225 aa13.9□□□□□ -0.18
ACER3-208ENST00000530334 CD44P16070 742 aaKnown RBP13.85□□□□□ -0.19
ACER3-208ENST00000530334 FARP1Q9Y4F1 1045 aaPredicted RBP13.84□□□□□ -0.19
ACER3-208ENST00000530334 CLCN6P51797 869 aa13.83□□□□□ -0.2
ACER3-208ENST00000530334 ABCC9O60706 1549 aa13.75□□□□□ -0.21
ACER3-208ENST00000530334 SPDYE4A6NLX3 237 aa13.73□□□□□ -0.21
ACER3-208ENST00000530334 ZNF579Q8NAF0 562 aaKnown RBP13.66□□□□□ -0.22
ACER3-208ENST00000530334 POTEB2H3BUK9 544 aa13.62□□□□□ -0.23
ACER3-208ENST00000530334 CREBZFQ9NS37 354 aa13.62□□□□□ -0.23
ACER3-208ENST00000530334 GALR2O43603 387 aaPredicted RBP13.59□□□□□ -0.23
ACER3-208ENST00000530334 OTUD5Q96G74 571 aa13.59□□□□□ -0.23
ACER3-208ENST00000530334 DCBLD2Q96PD2 775 aa13.59□□□□□ -0.23
ACER3-208ENST00000530334 PLSCR2Q9NRY7 297 aa13.59□□□□□ -0.23
ACER3-208ENST00000530334 ZRANB1Q9UGI0 708 aa13.57□□□□□ -0.24
ACER3-208ENST00000530334 NPM1P06748 294 aaKnown RBP eCLIP13.5□□□□□ -0.25
ACER3-208ENST00000530334 PROM2Q8N271 834 aa13.49□□□□□ -0.25
ACER3-208ENST00000530334 PAK3O75914 559 aaPredicted RBP13.47□□□□□ -0.25
ACER3-208ENST00000530334 PELP1Q8IZL8 1130 aaKnown RBP13.46□□□□□ -0.25
ACER3-208ENST00000530334 PHF12Q96QT6 1004 aa13.43□□□□□ -0.26
ACER3-208ENST00000530334 MNX1P50219 401 aaPredicted RBP13.39□□□□□ -0.27
ACER3-208ENST00000530334 POTEJP0CG39 1038 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms