RNA–Protein interactions for RNA: ENST00000530102.1

LINC01493-201, Transcript of long intergenic non-protein coding RNA 1493, humanhuman

TSL 5 BASIC

Gene LINC01493, Length 460 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01493-201ENST00000530102 AEBP2Q6ZN18 517 aaPredicted RBP21.63■■□□□ 1.05
LINC01493-201ENST00000530102 CHIC1Q5VXU3 224 aa21.46■■□□□ 1.03
LINC01493-201ENST00000530102 PHF23Q9BUL5 403 aaPredicted RBP18.92■□□□□ 0.62
LINC01493-201ENST00000530102 SENP3Q9H4L4 574 aaPredicted RBP18.3■□□□□ 0.52
LINC01493-201ENST00000530102 PLPPR3Q6T4P5 718 aa17.56■□□□□ 0.4
LINC01493-201ENST00000530102 FOXD1Q16676 465 aa16.95■□□□□ 0.3
LINC01493-201ENST00000530102 PPP6R1Q9UPN7 881 aa16.58■□□□□ 0.24
LINC01493-201ENST00000530102 ADRA2BP18089 450 aa16.57■□□□□ 0.24
LINC01493-201ENST00000530102 PIAS4Q8N2W9 510 aaPredicted RBP16.04■□□□□ 0.16
LINC01493-201ENST00000530102 KCNA4P22459 653 aa15.53■□□□□ 0.08
LINC01493-201ENST00000530102 PPP4R3CPQ6ZMV5 832 aa15.53■□□□□ 0.08
LINC01493-201ENST00000530102 MSH5O43196 834 aa15.49■□□□□ 0.07
LINC01493-201ENST00000530102 NCBP3Q53F19 620 aaKnown RBP15.21■□□□□ 0.03
LINC01493-201ENST00000530102 SCAF1Q9H7N4 1312 aaKnown RBP15.16■□□□□ 0.02
LINC01493-201ENST00000530102 CNKSR2Q8WXI2 1034 aa15.02■□□□□ -0
LINC01493-201ENST00000530102 NPM3O75607 178 aaKnown RBP14.99□□□□□ -0.01
LINC01493-201ENST00000530102 MAPK8IP2Q13387 824 aaPredicted RBP14.94□□□□□ -0.02
LINC01493-201ENST00000530102 SLC4A1APQ9BWU0 796 aaKnown RBP14.85□□□□□ -0.03
LINC01493-201ENST00000530102 EHMT2Q96KQ7 1210 aa14.78□□□□□ -0.04
LINC01493-201ENST00000530102 DMRT2Q9Y5R5 561 aa14.67□□□□□ -0.06
LINC01493-201ENST00000530102 RNF216Q9NWF9 866 aaPredicted RBP14.65□□□□□ -0.06
LINC01493-201ENST00000530102 DNAJC5BQ9UF47 199 aa14.56□□□□□ -0.08
LINC01493-201ENST00000530102 HOXD11P31277 338 aaPredicted RBP14.51□□□□□ -0.09
LINC01493-201ENST00000530102 CSRNP3Q8WYN3 585 aa14.51□□□□□ -0.09
LINC01493-201ENST00000530102 ZBTB22O15209 634 aa14.31□□□□□ -0.12
LINC01493-201ENST00000530102 FOXD4L1Q9NU39 408 aa14.2□□□□□ -0.14
LINC01493-201ENST00000530102 SLC4A2P04920 1241 aa14.08□□□□□ -0.16
LINC01493-201ENST00000530102 POTEDQ86YR6 584 aa14.02□□□□□ -0.17
LINC01493-201ENST00000530102 DCAF8L1A6NGE4 600 aa13.97□□□□□ -0.17
LINC01493-201ENST00000530102 MYCNP04198 464 aaPredicted RBP13.84□□□□□ -0.19
LINC01493-201ENST00000530102 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.79□□□□□ -0.2
LINC01493-201ENST00000530102 ATXN8OSP0DMR3 200 aa13.71□□□□□ -0.21
LINC01493-201ENST00000530102 U3KPZ7 1027 aaPredicted RBP13.62□□□□□ -0.23
LINC01493-201ENST00000530102 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.56□□□□□ -0.24
LINC01493-201ENST00000530102 HNRNPUL2Q1KMD3 747 aaKnown RBP13.56□□□□□ -0.24
LINC01493-201ENST00000530102 SAMD1Q6SPF0 538 aaPredicted RBP13.53□□□□□ -0.24
LINC01493-201ENST00000530102 ATF5Q9Y2D1 282 aaPredicted RBP13.45□□□□□ -0.26
LINC01493-201ENST00000530102 APLP2Q06481 763 aa13.34□□□□□ -0.27
LINC01493-201ENST00000530102 RNF39Q9H2S5 420 aa13.32□□□□□ -0.28
LINC01493-201ENST00000530102 ZNF219Q9P2Y4 722 aaPredicted RBP13.21□□□□□ -0.29
LINC01493-201ENST00000530102 C1QBPQ07021 282 aaKnown RBP13.18□□□□□ -0.3
LINC01493-201ENST00000530102 SPINK5Q9NQ38 1064 aaPredicted RBP13.13□□□□□ -0.31
LINC01493-201ENST00000530102 TRHP20396 242 aaPredicted RBP13.07□□□□□ -0.32
LINC01493-201ENST00000530102 FKBP8Q14318 412 aa13.06□□□□□ -0.32
LINC01493-201ENST00000530102 CAPN15O75808 1086 aa13.05□□□□□ -0.32
LINC01493-201ENST00000530102 POLA2Q14181 598 aa12.96□□□□□ -0.33
LINC01493-201ENST00000530102 MKRN4PQ13434 485 aaPredicted RBP12.89□□□□□ -0.35
LINC01493-201ENST00000530102 NISCHQ9Y2I1 1504 aa12.86□□□□□ -0.35
LINC01493-201ENST00000530102 FBLN2P98095 1184 aa12.85□□□□□ -0.35
LINC01493-201ENST00000530102 ABCB7O75027 752 aa12.83□□□□□ -0.36
LINC01493-201ENST00000530102 DSG3P32926 999 aa12.78□□□□□ -0.36
LINC01493-201ENST00000530102 ZBTB12Q9Y330 459 aaPredicted RBP12.77□□□□□ -0.37
LINC01493-201ENST00000530102 SPDYE4A6NLX3 237 aa12.75□□□□□ -0.37
LINC01493-201ENST00000530102 CACNB1Q02641 598 aaPredicted RBP12.7□□□□□ -0.38
LINC01493-201ENST00000530102 PROM2Q8N271 834 aa12.62□□□□□ -0.39
LINC01493-201ENST00000530102 FBXO3Q9UK99 471 aa12.53□□□□□ -0.4
LINC01493-201ENST00000530102 AMER1Q5JTC6 1135 aaPredicted RBP12.5□□□□□ -0.41
LINC01493-201ENST00000530102 OSCARQ8IYS5 282 aa12.48□□□□□ -0.41
LINC01493-201ENST00000530102 RTN4Q9NQC3 1192 aaKnown RBP12.47□□□□□ -0.41
LINC01493-201ENST00000530102 SPDYE2BA6NHP3 402 aa12.45□□□□□ -0.42
LINC01493-201ENST00000530102 SPDYE6P0CI01 402 aa12.45□□□□□ -0.42
LINC01493-201ENST00000530102 SPDYE2Q495Y8 402 aa12.45□□□□□ -0.42
LINC01493-201ENST00000530102 ZNF692Q9BU19 519 aaPredicted RBP12.45□□□□□ -0.42
LINC01493-201ENST00000530102 SSUH2Q9Y2M2 353 aa12.4□□□□□ -0.42
LINC01493-201ENST00000530102 VASPP50552 380 aaPredicted RBP12.34□□□□□ -0.43
LINC01493-201ENST00000530102 PABPN1Q86U42 306 aaKnown RBP eCLIP12.29□□□□□ -0.44
LINC01493-201ENST00000530102 STAG3Q9UJ98 1225 aa12.22□□□□□ -0.45
LINC01493-201ENST00000530102 IFNLR1Q8IU57 520 aaPredicted RBP12.21□□□□□ -0.45
LINC01493-201ENST00000530102 RBM42Q9BTD8 480 aaKnown RBP12.15□□□□□ -0.46
LINC01493-201ENST00000530102 AKT1S1Q96B36 256 aa12.1□□□□□ -0.47
LINC01493-201ENST00000530102 MIER1Q8N108 512 aa12.05□□□□□ -0.48
LINC01493-201ENST00000530102 PLCD3Q8N3E9 789 aa12.05□□□□□ -0.48
LINC01493-201ENST00000530102 KLHL34Q8N239 644 aa12.03□□□□□ -0.48
LINC01493-201ENST00000530102 SPOCK2Q92563 424 aa12.01□□□□□ -0.49
LINC01493-201ENST00000530102 SPDYE1Q8NFV5 336 aaPredicted RBP12□□□□□ -0.49
LINC01493-201ENST00000530102 REM2Q8IYK8 340 aaPredicted RBP11.98□□□□□ -0.49
LINC01493-201ENST00000530102 PLEKHG5O94827 1062 aa11.95□□□□□ -0.5
LINC01493-201ENST00000530102 PKD2Q13563 968 aa11.93□□□□□ -0.5
LINC01493-201ENST00000530102 ZBTB47Q9UFB7 747 aaPredicted RBP11.91□□□□□ -0.5
LINC01493-201ENST00000530102 CLEC11AQ9Y240 323 aa11.9□□□□□ -0.5
LINC01493-201ENST00000530102 PRR29P0C7W0 189 aa11.87□□□□□ -0.51
LINC01493-201ENST00000530102 PITPNM1O00562 1244 aa11.83□□□□□ -0.52
LINC01493-201ENST00000530102 CREBZFQ9NS37 354 aa11.81□□□□□ -0.52
LINC01493-201ENST00000530102 SLC24A1O60721 1099 aa11.8□□□□□ -0.52
LINC01493-201ENST00000530102 ECM2O94769 699 aaPredicted RBP11.78□□□□□ -0.52
LINC01493-201ENST00000530102 MNX1P50219 401 aaPredicted RBP11.74□□□□□ -0.53
LINC01493-201ENST00000530102 CIZ1Q9ULV3 898 aaPredicted RBP11.74□□□□□ -0.53
LINC01493-201ENST00000530102 NUBP1P53384 320 aa11.73□□□□□ -0.53
LINC01493-201ENST00000530102 DCAF8L2P0C7V8 631 aa11.71□□□□□ -0.53
LINC01493-201ENST00000530102 GSE1Q14687 1217 aa11.68□□□□□ -0.54
LINC01493-201ENST00000530102 TRIM41Q8WV44 630 aa11.67□□□□□ -0.54
LINC01493-201ENST00000530102 RGL2O15211 777 aa11.66□□□□□ -0.54
LINC01493-201ENST00000530102 DCAF8Q5TAQ9 597 aa11.62□□□□□ -0.55
LINC01493-201ENST00000530102 NPM1P06748 294 aaKnown RBP eCLIP11.61□□□□□ -0.55
LINC01493-201ENST00000530102 FAM212AQ96EL1 285 aa11.6□□□□□ -0.55
LINC01493-201ENST00000530102 CHADLQ6NUI6 762 aa11.58□□□□□ -0.56
LINC01493-201ENST00000530102 RASEFQ8IZ41 740 aa11.58□□□□□ -0.56
LINC01493-201ENST00000530102 PLCB2Q00722 1185 aa11.57□□□□□ -0.56
LINC01493-201ENST00000530102 FXR2P51116 673 aaKnown RBP eCLIP11.56□□□□□ -0.56
LINC01493-201ENST00000530102 FARP1Q9Y4F1 1045 aaPredicted RBP11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms