RNA–Protein interactions for RNA: ENST00000529421.5

TPT1-210, Transcript of tumor protein, translationally-controlled 1, humanhuman

TSL 3

Gene TPT1, Length 801 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPT1-210ENST00000529421 AEBP2Q6ZN18 517 aaPredicted RBP27.3■■□□□ 1.96
TPT1-210ENST00000529421 CHIC1Q5VXU3 224 aa25.6■■□□□ 1.69
TPT1-210ENST00000529421 SENP3Q9H4L4 574 aaPredicted RBP23.37■■□□□ 1.33
TPT1-210ENST00000529421 PHF23Q9BUL5 403 aaPredicted RBP23.01■■□□□ 1.27
TPT1-210ENST00000529421 FOXD1Q16676 465 aa21.81■■□□□ 1.08
TPT1-210ENST00000529421 POTEDQ86YR6 584 aa20.65■□□□□ 0.9
TPT1-210ENST00000529421 MSH5O43196 834 aa20.57■□□□□ 0.88
TPT1-210ENST00000529421 PLPPR3Q6T4P5 718 aa20.3■□□□□ 0.84
TPT1-210ENST00000529421 PIAS4Q8N2W9 510 aaPredicted RBP20.29■□□□□ 0.84
TPT1-210ENST00000529421 PPP6R1Q9UPN7 881 aa20.11■□□□□ 0.81
TPT1-210ENST00000529421 ADRA2BP18089 450 aa20.03■□□□□ 0.8
TPT1-210ENST00000529421 MAPK8IP2Q13387 824 aaPredicted RBP18.5■□□□□ 0.55
TPT1-210ENST00000529421 DMRT2Q9Y5R5 561 aa18.47■□□□□ 0.55
TPT1-210ENST00000529421 SCAF1Q9H7N4 1312 aaKnown RBP18.36■□□□□ 0.53
TPT1-210ENST00000529421 CACNB1Q02641 598 aaPredicted RBP17.85■□□□□ 0.45
TPT1-210ENST00000529421 PPP4R3CPQ6ZMV5 832 aa17.74■□□□□ 0.43
TPT1-210ENST00000529421 DCAF8L1A6NGE4 600 aa17.72■□□□□ 0.43
TPT1-210ENST00000529421 HOXD11P31277 338 aaPredicted RBP17.66■□□□□ 0.42
TPT1-210ENST00000529421 RNF39Q9H2S5 420 aa17.51■□□□□ 0.39
TPT1-210ENST00000529421 CNKSR2Q8WXI2 1034 aa17.5■□□□□ 0.39
TPT1-210ENST00000529421 RNF216Q9NWF9 866 aaPredicted RBP17.44■□□□□ 0.38
TPT1-210ENST00000529421 C1QBPQ07021 282 aaKnown RBP17.24■□□□□ 0.35
TPT1-210ENST00000529421 DNAJC5BQ9UF47 199 aa17.14■□□□□ 0.33
TPT1-210ENST00000529421 NCBP3Q53F19 620 aaKnown RBP16.97■□□□□ 0.31
TPT1-210ENST00000529421 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.82■□□□□ 0.28
TPT1-210ENST00000529421 NPM3O75607 178 aaKnown RBP16.7■□□□□ 0.26
TPT1-210ENST00000529421 U3KPZ7 1027 aaPredicted RBP16.42■□□□□ 0.22
TPT1-210ENST00000529421 CAPN15O75808 1086 aa16.28■□□□□ 0.2
TPT1-210ENST00000529421 SPINK5Q9NQ38 1064 aaPredicted RBP16.28■□□□□ 0.2
TPT1-210ENST00000529421 DSG3P32926 999 aa16.27■□□□□ 0.2
TPT1-210ENST00000529421 POTEHQ6S545 545 aa16.12■□□□□ 0.17
TPT1-210ENST00000529421 KCNA4P22459 653 aa16.05■□□□□ 0.16
TPT1-210ENST00000529421 SLC4A2P04920 1241 aa16.04■□□□□ 0.16
TPT1-210ENST00000529421 APLP2Q06481 763 aa15.96■□□□□ 0.15
TPT1-210ENST00000529421 TRHP20396 242 aaPredicted RBP15.93■□□□□ 0.14
TPT1-210ENST00000529421 ZNF219Q9P2Y4 722 aaPredicted RBP15.91■□□□□ 0.14
TPT1-210ENST00000529421 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.86■□□□□ 0.13
TPT1-210ENST00000529421 HNRNPUL2Q1KMD3 747 aaKnown RBP15.86■□□□□ 0.13
TPT1-210ENST00000529421 ABCB7O75027 752 aa15.85■□□□□ 0.13
TPT1-210ENST00000529421 SAMD1Q6SPF0 538 aaPredicted RBP15.74■□□□□ 0.11
TPT1-210ENST00000529421 RBM42Q9BTD8 480 aaKnown RBP15.55■□□□□ 0.08
TPT1-210ENST00000529421 MYCNP04198 464 aaPredicted RBP15.46■□□□□ 0.07
TPT1-210ENST00000529421 POLA2Q14181 598 aa15.42■□□□□ 0.06
TPT1-210ENST00000529421 CHRDL2Q6WN34 429 aa15.34■□□□□ 0.05
TPT1-210ENST00000529421 AKT1S1Q96B36 256 aa15.12■□□□□ 0.01
TPT1-210ENST00000529421 FOXD4L1Q9NU39 408 aa15.11■□□□□ 0.01
TPT1-210ENST00000529421 ATF5Q9Y2D1 282 aaPredicted RBP15.11■□□□□ 0.01
TPT1-210ENST00000529421 SLC4A1APQ9BWU0 796 aaKnown RBP15.1■□□□□ 0.01
TPT1-210ENST00000529421 ZBTB12Q9Y330 459 aaPredicted RBP15.1■□□□□ 0.01
TPT1-210ENST00000529421 REM2Q8IYK8 340 aaPredicted RBP14.97□□□□□ -0.01
TPT1-210ENST00000529421 SP7Q8TDD2 431 aaPredicted RBP14.94□□□□□ -0.02
TPT1-210ENST00000529421 OSCARQ8IYS5 282 aa14.93□□□□□ -0.02
TPT1-210ENST00000529421 PIP4P2Q8N4L2 257 aa14.89□□□□□ -0.03
TPT1-210ENST00000529421 PITPNM1O00562 1244 aa14.8□□□□□ -0.04
TPT1-210ENST00000529421 FXR2P51116 673 aaKnown RBP eCLIP14.76□□□□□ -0.05
TPT1-210ENST00000529421 ZBTB22O15209 634 aa14.74□□□□□ -0.05
TPT1-210ENST00000529421 HAX1O00165 279 aa14.73□□□□□ -0.05
TPT1-210ENST00000529421 ATXN8OSP0DMR3 200 aa14.7□□□□□ -0.06
TPT1-210ENST00000529421 SPDYE2BA6NHP3 402 aa14.61□□□□□ -0.07
TPT1-210ENST00000529421 SPDYE6P0CI01 402 aa14.61□□□□□ -0.07
TPT1-210ENST00000529421 SPDYE2Q495Y8 402 aa14.61□□□□□ -0.07
TPT1-210ENST00000529421 FBLN2P98095 1184 aa14.58□□□□□ -0.08
TPT1-210ENST00000529421 EVX2Q03828 476 aa14.5□□□□□ -0.09
TPT1-210ENST00000529421 SPDYE1Q8NFV5 336 aaPredicted RBP14.44□□□□□ -0.1
TPT1-210ENST00000529421 PRKAR2AP13861 404 aaKnown RBP14.42□□□□□ -0.1
TPT1-210ENST00000529421 CLEC11AQ9Y240 323 aa14.41□□□□□ -0.1
TPT1-210ENST00000529421 MKRN4PQ13434 485 aaPredicted RBP14.4□□□□□ -0.1
TPT1-210ENST00000529421 ZNF692Q9BU19 519 aaPredicted RBP14.37□□□□□ -0.11
TPT1-210ENST00000529421 NISCHQ9Y2I1 1504 aa14.36□□□□□ -0.11
TPT1-210ENST00000529421 SSUH2Q9Y2M2 353 aa14.36□□□□□ -0.11
TPT1-210ENST00000529421 C19orf67A6NJJ6 358 aa14.3□□□□□ -0.12
TPT1-210ENST00000529421 GABBR2O75899 941 aa14.17□□□□□ -0.14
TPT1-210ENST00000529421 CHADLQ6NUI6 762 aa14.17□□□□□ -0.14
TPT1-210ENST00000529421 PRR29P0C7W0 189 aa14.14□□□□□ -0.15
TPT1-210ENST00000529421 PABPN1Q86U42 306 aaKnown RBP eCLIP14.13□□□□□ -0.15
TPT1-210ENST00000529421 LHX8Q68G74 356 aa14.02□□□□□ -0.17
TPT1-210ENST00000529421 CD44P16070 742 aaKnown RBP13.94□□□□□ -0.18
TPT1-210ENST00000529421 FARP1Q9Y4F1 1045 aaPredicted RBP13.94□□□□□ -0.18
TPT1-210ENST00000529421 CLCN6P51797 869 aa13.87□□□□□ -0.19
TPT1-210ENST00000529421 POTEIP0CG38 1075 aa13.86□□□□□ -0.19
TPT1-210ENST00000529421 CSRNP3Q8WYN3 585 aa13.76□□□□□ -0.21
TPT1-210ENST00000529421 ZNF579Q8NAF0 562 aaKnown RBP13.72□□□□□ -0.21
TPT1-210ENST00000529421 DCBLD2Q96PD2 775 aa13.72□□□□□ -0.21
TPT1-210ENST00000529421 CREBZFQ9NS37 354 aa13.7□□□□□ -0.22
TPT1-210ENST00000529421 STAG3Q9UJ98 1225 aa13.7□□□□□ -0.22
TPT1-210ENST00000529421 ZRANB1Q9UGI0 708 aa13.69□□□□□ -0.22
TPT1-210ENST00000529421 SPDYE4A6NLX3 237 aa13.56□□□□□ -0.24
TPT1-210ENST00000529421 GALR2O43603 387 aaPredicted RBP13.56□□□□□ -0.24
TPT1-210ENST00000529421 PAK3O75914 559 aaPredicted RBP13.51□□□□□ -0.25
TPT1-210ENST00000529421 PHF12Q96QT6 1004 aa13.46□□□□□ -0.25
TPT1-210ENST00000529421 NPM1P06748 294 aaKnown RBP eCLIP13.45□□□□□ -0.26
TPT1-210ENST00000529421 MNX1P50219 401 aaPredicted RBP13.42□□□□□ -0.26
TPT1-210ENST00000529421 OTUD5Q96G74 571 aa13.42□□□□□ -0.26
TPT1-210ENST00000529421 POTEB2H3BUK9 544 aa13.39□□□□□ -0.27
TPT1-210ENST00000529421 PLSCR2Q9NRY7 297 aa13.39□□□□□ -0.27
TPT1-210ENST00000529421 EHMT2Q96KQ7 1210 aa13.37□□□□□ -0.27
TPT1-210ENST00000529421 PELP1Q8IZL8 1130 aaKnown RBP13.34□□□□□ -0.27
TPT1-210ENST00000529421 ASTLQ6HA08 431 aaPredicted RBP13.27□□□□□ -0.29
TPT1-210ENST00000529421 MS4A3Q96HJ5 214 aa13.27□□□□□ -0.29
TPT1-210ENST00000529421 ATMINO43313 823 aaPredicted RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms