RNA–Protein interactions for RNA: ENST00000529379.1

NUP98-216, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-216ENST00000529379 AEBP2Q6ZN18 517 aaPredicted RBP25.76■■□□□ 1.71
NUP98-216ENST00000529379 CHIC1Q5VXU3 224 aa24.8■■□□□ 1.56
NUP98-216ENST00000529379 PHF23Q9BUL5 403 aaPredicted RBP21.89■■□□□ 1.09
NUP98-216ENST00000529379 SENP3Q9H4L4 574 aaPredicted RBP21.71■■□□□ 1.07
NUP98-216ENST00000529379 FOXD1Q16676 465 aa20.29■□□□□ 0.84
NUP98-216ENST00000529379 PLPPR3Q6T4P5 718 aa20.01■□□□□ 0.79
NUP98-216ENST00000529379 PPP6R1Q9UPN7 881 aa19.41■□□□□ 0.7
NUP98-216ENST00000529379 ADRA2BP18089 450 aa19.32■□□□□ 0.68
NUP98-216ENST00000529379 PIAS4Q8N2W9 510 aaPredicted RBP18.99■□□□□ 0.63
NUP98-216ENST00000529379 MSH5O43196 834 aa18.66■□□□□ 0.58
NUP98-216ENST00000529379 PPP4R3CPQ6ZMV5 832 aa17.69■□□□□ 0.42
NUP98-216ENST00000529379 MAPK8IP2Q13387 824 aaPredicted RBP17.64■□□□□ 0.41
NUP98-216ENST00000529379 KCNA4P22459 653 aa17.55■□□□□ 0.4
NUP98-216ENST00000529379 POTEDQ86YR6 584 aa17.55■□□□□ 0.4
NUP98-216ENST00000529379 SCAF1Q9H7N4 1312 aaKnown RBP17.46■□□□□ 0.38
NUP98-216ENST00000529379 DMRT2Q9Y5R5 561 aa17.36■□□□□ 0.37
NUP98-216ENST00000529379 NCBP3Q53F19 620 aaKnown RBP17.24■□□□□ 0.35
NUP98-216ENST00000529379 CNKSR2Q8WXI2 1034 aa17.12■□□□□ 0.33
NUP98-216ENST00000529379 NPM3O75607 178 aaKnown RBP17.05■□□□□ 0.32
NUP98-216ENST00000529379 HOXD11P31277 338 aaPredicted RBP16.9■□□□□ 0.3
NUP98-216ENST00000529379 RNF216Q9NWF9 866 aaPredicted RBP16.85■□□□□ 0.29
NUP98-216ENST00000529379 SLC4A1APQ9BWU0 796 aaKnown RBP16.72■□□□□ 0.27
NUP98-216ENST00000529379 EHMT2Q96KQ7 1210 aa16.52■□□□□ 0.24
NUP98-216ENST00000529379 DCAF8L1A6NGE4 600 aa16.51■□□□□ 0.23
NUP98-216ENST00000529379 DNAJC5BQ9UF47 199 aa16.48■□□□□ 0.23
NUP98-216ENST00000529379 CSRNP3Q8WYN3 585 aa16.25■□□□□ 0.19
NUP98-216ENST00000529379 ZBTB22O15209 634 aa16.17■□□□□ 0.18
NUP98-216ENST00000529379 RNF39Q9H2S5 420 aa16.07■□□□□ 0.16
NUP98-216ENST00000529379 SLC4A2P04920 1241 aa16.06■□□□□ 0.16
NUP98-216ENST00000529379 FOXD4L1Q9NU39 408 aa16.05■□□□□ 0.16
NUP98-216ENST00000529379 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.01■□□□□ 0.152e-6■■■■□ 24.3
NUP98-216ENST00000529379 U3KPZ7 1027 aaPredicted RBP15.85■□□□□ 0.13
NUP98-216ENST00000529379 C1QBPQ07021 282 aaKnown RBP15.79■□□□□ 0.12
NUP98-216ENST00000529379 CACNB1Q02641 598 aaPredicted RBP15.74■□□□□ 0.11
NUP98-216ENST00000529379 MYCNP04198 464 aaPredicted RBP15.72■□□□□ 0.11
NUP98-216ENST00000529379 SPINK5Q9NQ38 1064 aaPredicted RBP15.49■□□□□ 0.07
NUP98-216ENST00000529379 ATXN8OSP0DMR3 200 aa15.45■□□□□ 0.06
NUP98-216ENST00000529379 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.42■□□□□ 0.06
NUP98-216ENST00000529379 HNRNPUL2Q1KMD3 747 aaKnown RBP15.42■□□□□ 0.06
NUP98-216ENST00000529379 SAMD1Q6SPF0 538 aaPredicted RBP15.39■□□□□ 0.05
NUP98-216ENST00000529379 ATF5Q9Y2D1 282 aaPredicted RBP15.35■□□□□ 0.05
NUP98-216ENST00000529379 CAPN15O75808 1086 aa15.31■□□□□ 0.04
NUP98-216ENST00000529379 TRHP20396 242 aaPredicted RBP15.21■□□□□ 0.03
NUP98-216ENST00000529379 DSG3P32926 999 aa15.21■□□□□ 0.03
NUP98-216ENST00000529379 APLP2Q06481 763 aa15.19■□□□□ 0.02
NUP98-216ENST00000529379 ZNF219Q9P2Y4 722 aaPredicted RBP15.13■□□□□ 0.01
NUP98-216ENST00000529379 ABCB7O75027 752 aa15.08■□□□□ 0
NUP98-216ENST00000529379 POLA2Q14181 598 aa14.94□□□□□ -0.02
NUP98-216ENST00000529379 MKRN4PQ13434 485 aaPredicted RBP14.68□□□□□ -0.06
NUP98-216ENST00000529379 FKBP8Q14318 412 aa14.65□□□□□ -0.06
NUP98-216ENST00000529379 FBLN2P98095 1184 aa14.59□□□□□ -0.07
NUP98-216ENST00000529379 ZBTB12Q9Y330 459 aaPredicted RBP14.54□□□□□ -0.08
NUP98-216ENST00000529379 OSCARQ8IYS5 282 aa14.47□□□□□ -0.09
NUP98-216ENST00000529379 SPDYE4A6NLX3 237 aa14.41□□□□□ -0.1
NUP98-216ENST00000529379 RBM42Q9BTD8 480 aaKnown RBP14.34□□□□□ -0.11
NUP98-216ENST00000529379 PROM2Q8N271 834 aa14.22□□□□□ -0.13
NUP98-216ENST00000529379 SPDYE2BA6NHP3 402 aa14.2□□□□□ -0.14
NUP98-216ENST00000529379 SPDYE6P0CI01 402 aa14.2□□□□□ -0.14
NUP98-216ENST00000529379 SPDYE2Q495Y8 402 aa14.2□□□□□ -0.14
NUP98-216ENST00000529379 ZNF692Q9BU19 519 aaPredicted RBP14.19□□□□□ -0.14
NUP98-216ENST00000529379 AKT1S1Q96B36 256 aa14.18□□□□□ -0.14
NUP98-216ENST00000529379 SSUH2Q9Y2M2 353 aa14.15□□□□□ -0.14
NUP98-216ENST00000529379 REM2Q8IYK8 340 aaPredicted RBP14.11□□□□□ -0.15
NUP98-216ENST00000529379 PABPN1Q86U42 306 aaKnown RBP eCLIP14.02□□□□□ -0.17
NUP98-216ENST00000529379 FBXO3Q9UK99 471 aa14.01□□□□□ -0.17
NUP98-216ENST00000529379 PITPNM1O00562 1244 aa13.97□□□□□ -0.17
NUP98-216ENST00000529379 CHRDL2Q6WN34 429 aa13.95□□□□□ -0.18
NUP98-216ENST00000529379 VASPP50552 380 aaPredicted RBP13.86□□□□□ -0.19
NUP98-216ENST00000529379 SPDYE1Q8NFV5 336 aaPredicted RBP13.82□□□□□ -0.2
NUP98-216ENST00000529379 POTEHQ6S545 545 aa13.8□□□□□ -0.2
NUP98-216ENST00000529379 STAG3Q9UJ98 1225 aa13.79□□□□□ -0.2
NUP98-216ENST00000529379 CLEC11AQ9Y240 323 aa13.78□□□□□ -0.2
NUP98-216ENST00000529379 PIP4P2Q8N4L2 257 aa13.76□□□□□ -0.21
NUP98-216ENST00000529379 FXR2P51116 673 aaKnown RBP eCLIP13.75□□□□□ -0.217e-14■■□□□ 12.5
NUP98-216ENST00000529379 IFNLR1Q8IU57 520 aaPredicted RBP13.72□□□□□ -0.21
NUP98-216ENST00000529379 RTN4Q9NQC3 1192 aaKnown RBP13.72□□□□□ -0.21
NUP98-216ENST00000529379 AMER1Q5JTC6 1135 aaPredicted RBP13.71□□□□□ -0.21
NUP98-216ENST00000529379 MIER1Q8N108 512 aa13.63□□□□□ -0.23
NUP98-216ENST00000529379 PLCD3Q8N3E9 789 aa13.63□□□□□ -0.23
NUP98-216ENST00000529379 PRR29P0C7W0 189 aa13.61□□□□□ -0.23
NUP98-216ENST00000529379 PRKAR2AP13861 404 aaKnown RBP13.57□□□□□ -0.24
NUP98-216ENST00000529379 CHADLQ6NUI6 762 aa13.56□□□□□ -0.24
NUP98-216ENST00000529379 KLHL34Q8N239 644 aa13.55□□□□□ -0.24
NUP98-216ENST00000529379 CREBZFQ9NS37 354 aa13.5□□□□□ -0.25
NUP98-216ENST00000529379 PLEKHG5O94827 1062 aa13.49□□□□□ -0.25
NUP98-216ENST00000529379 SPOCK2Q92563 424 aa13.48□□□□□ -0.25
NUP98-216ENST00000529379 ZBTB47Q9UFB7 747 aaPredicted RBP13.42□□□□□ -0.26
NUP98-216ENST00000529379 MNX1P50219 401 aaPredicted RBP13.38□□□□□ -0.27
NUP98-216ENST00000529379 FARP1Q9Y4F1 1045 aaPredicted RBP13.38□□□□□ -0.27
NUP98-216ENST00000529379 EVX2Q03828 476 aa13.36□□□□□ -0.27
NUP98-216ENST00000529379 PKD2Q13563 968 aa13.34□□□□□ -0.27
NUP98-216ENST00000529379 HAX1O00165 279 aa13.3□□□□□ -0.28
NUP98-216ENST00000529379 C19orf67A6NJJ6 358 aa13.29□□□□□ -0.28
NUP98-216ENST00000529379 NUBP1P53384 320 aa13.29□□□□□ -0.28
NUP98-216ENST00000529379 CIZ1Q9ULV3 898 aaPredicted RBP13.24□□□□□ -0.29
NUP98-216ENST00000529379 NPM1P06748 294 aaKnown RBP eCLIP13.21□□□□□ -0.29
NUP98-216ENST00000529379 ECM2O94769 699 aaPredicted RBP13.19□□□□□ -0.3
NUP98-216ENST00000529379 RASEFQ8IZ41 740 aa13.18□□□□□ -0.3
NUP98-216ENST00000529379 GSE1Q14687 1217 aa13.16□□□□□ -0.3
NUP98-216ENST00000529379 DCAF8Q5TAQ9 597 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms